Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 1.2e-52 209.5 104 100.0
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 8.1e-41 170.2 101 85.1
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.8e-35 152.5 104 75.0
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 6.7e-35 150.6 104 74.0
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 8.7e-35 150.2 103 70.9
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.5e-34 148.7 103 71.8
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 3.3e-34 148.3 104 72.1
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 5.6e-34 147.5 104 70.2
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 3.7e-33 144.8 104 72.1
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 4.8e-33 144.4 104 70.2
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 1.4e-32 142.9 104 66.3
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 5.3e-32 141.0 104 68.3
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 6.9e-32 140.6 102 68.6
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 6.9e-32 140.6 104 66.3
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 9.0e-32 140.2 104 67.3
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.2e-31 139.8 102 69.6
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 1.2e-31 139.8 104 69.2
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.5e-31 139.4 104 68.3
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 1.5e-31 139.4 104 66.3
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.5e-31 139.4 104 66.3
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.5e-31 139.4 104 66.3
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.5e-31 139.4 105 70.5
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 2.0e-31 139.0 102 69.6
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 2.0e-31 139.0 104 68.3
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 2.0e-31 139.0 103 68.0
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 2.0e-31 139.0 104 68.3
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 2.0e-31 139.0 104 68.3
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 3.4e-31 138.3 100 70.0
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 5.8e-31 137.5 102 66.7
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 5.8e-31 137.5 103 67.0
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 5.8e-31 137.5 104 66.3
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 5.8e-31 137.5 102 67.6
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 7.6e-31 137.1 102 66.7
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 7.6e-31 137.1 125 60.8
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 7.6e-31 137.1 102 66.7
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 7.6e-31 137.1 105 70.5
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.0e-30 136.7 104 67.3
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 2.2e-30 135.6 102 67.6
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 2.9e-30 135.2 104 67.3
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 2.9e-30 135.2 104 67.3
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 2.9e-30 135.2 101 66.3
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 2.9e-30 135.2 103 65.0
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 4.9e-30 134.4 101 66.3
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 6.5e-30 134.0 102 64.7
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 8.4e-30 133.7 98 66.3
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 8.4e-30 133.7 97 69.1
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 1.1e-29 133.3 102 65.7
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 1.1e-29 133.3 104 68.3
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 1.4e-29 132.9 106 64.2
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 2.5e-29 132.1 102 65.7
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 2.5e-29 132.1 101 63.4
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 3.2e-29 131.7 103 64.1
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 3.2e-29 131.7 101 63.4
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 3.2e-29 131.7 103 63.1
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 4.2e-29 131.3 103 66.0
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 5.5e-29 131.0 103 65.0
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 5.5e-29 131.0 103 66.0
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 5.5e-29 131.0 103 66.0
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 5.5e-29 131.0 103 66.0
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 9.3e-29 130.2 102 63.7
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 9.3e-29 130.2 102 62.7
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 1.2e-28 129.8 104 62.5
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 1.2e-28 129.8 101 66.3
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 1.6e-28 129.4 104 63.5
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 1.6e-28 129.4 101 62.4
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.6e-28 129.4 86 75.6
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 2.7e-28 128.6 104 60.6
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 2.7e-28 128.6 102 62.7
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.0e-27 126.7 103 60.2
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 1.0e-27 126.7 97 63.9
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 1.3e-27 126.3 105 64.8
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 2.3e-27 125.6 104 61.5
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 2.3e-27 125.6 104 65.4
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 2.3e-27 125.6 100 63.0
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 3.0e-27 125.2 104 62.5
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 5.1e-27 124.4 104 60.6
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 5.1e-27 124.4 104 60.6
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 5.1e-27 124.4 104 60.6
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 5.1e-27 124.4 104 60.6
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 5.1e-27 124.4 97 62.9
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 5.1e-27 124.4 102 59.8
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.1e-26 123.2 104 59.6
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 1.1e-26 123.2 104 60.6
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 1.5e-26 122.9 93 67.7
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 1.9e-26 122.5 104 59.6
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.9e-26 122.5 104 61.5
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 5.7e-26 120.9 104 57.7
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 5.7e-26 120.9 102 57.8
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 2.1e-25 119.0 96 62.5
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 3.7e-25 118.2 96 64.6
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 8.2e-25 117.1 86 67.4
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 8.2e-25 117.1 96 61.5
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 1.1e-24 116.7 96 61.5
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.1e-24 116.7 96 61.5
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 1.1e-24 116.7 102 61.8
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.4e-24 116.3 86 65.1
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 1.4e-24 116.3 103 60.2
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 1.8e-24 115.9 96 61.5
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 1.8e-24 115.9 96 61.5
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 5.3e-24 114.4 98 54.1
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 1.3e-22 109.8 91 59.3
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 3.8e-22 108.2 86 61.6
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 3.8e-22 108.2 84 64.3
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 1.1e-21 106.7 84 61.9
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.9e-21 105.9 107 55.1
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.4e-16 89.7 69 65.2
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.8e-16 89.4 95 50.5
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 3.1e-16 88.6 80 60.0
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 7.7e-15 84.0 89 48.3
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.4e-13 79.7 115 45.2
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 9.4e-13 77.0 95 45.3
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 9.4e-13 77.0 94 50.0
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 2.3e-11 72.4 63 55.6
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 5.7e-10 67.8 37 78.4
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 9.7e-10 67.0 94 39.4
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.7e-09 66.2 36 77.8
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 5.3e-08 61.2 84 44.0
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 5.0e-06 54.7 39 59.0


User provided reference genes

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