Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 1.3e-120 436.4 219 100.0
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 3.2e-87 325.5 215 71.6
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 4.3e-84 315.1 211 68.7
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 4.8e-83 311.6 209 70.3
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 1.4e-82 310.1 217 65.9
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.4e-82 310.1 217 67.3
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 2.0e-81 306.2 212 67.9
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 2.6e-81 305.8 212 68.4
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.3e-80 303.5 209 68.4
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 1.3e-80 303.5 207 68.6
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.7e-80 303.1 209 67.9
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 1.7e-80 303.1 209 67.9
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 3.8e-80 302.0 210 67.1
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 4.9e-80 301.6 210 69.0
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 8.4e-80 300.8 209 67.5
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 8.4e-80 300.8 216 66.2
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 8.4e-80 300.8 212 66.5
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 9.3e-79 297.4 212 65.6
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 1.2e-78 297.0 212 67.0
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 1.2e-78 297.0 212 66.0
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 3.5e-78 295.4 214 66.4
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 3.0e-77 292.4 211 63.0
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 3.0e-77 292.4 212 65.6
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 3.9e-77 292.0 215 65.6
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 5.1e-77 291.6 214 67.3
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 8.7e-77 290.8 216 66.7
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.9e-76 289.7 215 65.1
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 2.5e-76 289.3 215 65.6
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 3.3e-76 288.9 211 64.9
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 7.4e-76 287.7 204 65.7
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 9.6e-76 287.3 218 62.4
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 2.1e-75 286.2 212 64.2
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 2.1e-75 286.2 216 63.9
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 2.1e-75 286.2 188 72.3
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 2.8e-75 285.8 204 65.7
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 6.9e-74 281.2 216 61.6
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.2e-73 280.4 212 64.2
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 1.2e-73 280.4 211 63.5
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 2.0e-73 279.6 215 63.3
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 2.6e-73 279.3 209 65.1
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 2.6e-73 279.3 215 62.8
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.6e-73 279.3 215 62.8
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 2.9e-72 275.8 209 63.6
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 4.9e-72 275.0 204 63.7
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 6.4e-72 274.6 210 64.3
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 1.4e-71 273.5 209 60.8
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 2.4e-71 272.7 211 60.2
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 3.2e-71 272.3 212 61.8
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 4.2e-71 271.9 215 60.9
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 9.3e-71 270.8 204 60.8
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 1.2e-70 270.4 210 61.9
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 1.2e-70 270.4 205 63.4
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 1.6e-70 270.0 212 57.5
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 2.1e-70 269.6 211 58.8
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.1e-70 269.6 215 60.5
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 2.7e-70 269.2 211 58.8
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 2.7e-70 269.2 211 63.0
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 6.0e-70 268.1 220 60.0
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 7.9e-70 267.7 209 60.3
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 7.9e-70 267.7 213 60.1
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 7.9e-70 267.7 209 59.3
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 3.9e-69 265.4 207 60.9
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 1.1e-68 263.8 207 60.4
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 7.4e-68 261.2 208 63.9
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.3e-67 260.4 208 63.5
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 1.6e-67 260.0 208 59.6
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 2.1e-67 259.6 209 61.2
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 6.2e-67 258.1 210 61.9
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 2.4e-66 256.1 208 60.6
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 3.1e-66 255.8 209 60.8
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 4.0e-66 255.4 209 60.8
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 9.0e-66 254.2 202 58.4
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 2.6e-65 252.7 209 60.8
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 1.4e-63 246.9 201 59.7
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 5.5e-63 245.0 208 57.2
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 9.3e-63 244.2 203 59.1
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 1.2e-62 243.8 211 59.2
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 2.1e-62 243.0 208 58.2
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 3.5e-62 242.3 206 57.8
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 3.5e-62 242.3 206 57.8
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 4.6e-62 241.9 203 59.1
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 6.0e-62 241.5 203 59.6
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 6.0e-62 241.5 208 59.1
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 7.9e-62 241.1 209 58.4
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 7.9e-62 241.1 209 58.4
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 7.9e-62 241.1 209 58.4
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 1.0e-61 240.7 198 59.1
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 1.1e-60 237.3 209 58.4
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 1.5e-60 236.9 194 59.8
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 1.9e-60 236.5 207 56.0
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 5.7e-60 235.0 208 58.2
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 9.6e-60 234.2 219 53.0
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 8.2e-59 231.1 208 57.7
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 1.3e-56 223.8 211 55.5
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 8.5e-56 221.1 205 52.7
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 3.0e-53 212.6 209 55.5
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 4.3e-52 208.8 197 53.8
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.4e-50 203.8 216 46.8
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.8e-50 203.4 215 47.0
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 4.5e-49 198.7 149 61.7
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 8.5e-48 194.5 150 64.7
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 1.8e-42 176.8 150 57.3
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 2.9e-40 169.5 143 60.8
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.6e-33 147.1 135 54.1
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 1.0e-32 144.4 216 38.0
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 3.0e-29 132.9 185 37.3
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 9.4e-23 111.3 184 35.9
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 4.7e-22 109.0 191 39.3
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 1.8e-21 107.1 189 34.9
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 2.6e-20 103.2 75 62.7
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.5e-15 87.4 68 57.4
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 1.5e-15 87.4 141 35.5
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 7.2e-15 85.1 63 61.9
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.8e-13 80.5 124 36.3
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 9.8e-12 74.7 71 56.3
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 6.3e-11 72.0 71 54.9


User provided reference genes

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