Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035669.1 Olea europaea HOM05D001014 ORTHO05D000896 2.4e-87 325.5 167 100.0
Solyc10g039360.2 Solanum lycopersicum HOM05D001014 ORTHO05D000896 6.3e-11 71.6 149 36.2
PGSC0003DMG400025699 Solanum tuberosum HOM05D001014 ORTHO05D000896 6.3e-11 71.6 116 39.7
Sopen10g012080 Solanum pennellii HOM05D001014 ORTHO05D000896 8.2e-11 71.2 149 35.6
Gohir.D08G068600 Gossypium hirsutum HOM05D001014 ORTHO05D000896 2.4e-10 69.7 155 34.8
Gorai.004G071800 Gossypium raimondii HOM05D001014 ORTHO05D000896 2.4e-10 69.7 155 34.8
Lj7A542T24 Lonicera japonica HOM05D001014 ORTHO05D000896 4.1e-10 68.9 140 35.7
Gohir.A08G059400 Gossypium hirsutum HOM05D001014 ORTHO05D000896 7.0e-10 68.2 155 34.2
Thecc.01G392000 Theobroma cacao HOM05D001014 ORTHO05D000896 1.0e-08 64.3 162 32.7
MSTRG.20703 Avicennia marina HOM05D001014 ORTHO05D000896 2.9e-08 62.8 117 40.2
SGA_v2.0_scaffold116G32304 Striga asiatica HOM05D001014 ORTHO05D000896 5.0e-08 62.0 122 36.1
CDE08G0818 Ceratophyllum demersum HOM05D001014 ORTHO05D000896 6.5e-08 61.6 127 33.1
HPP92_026101 Vanilla planifolia HOM05D001014 ORTHO05D000896 6.5e-08 61.6 119 32.8
Haze_02801 Corylus avellana HOM05D001014 ORTHO05D000896 1.1e-07 60.8 122 32.8
FvH4_7g09720 Fragaria vesca HOM05D001014 ORTHO05D000896 1.1e-07 60.8 106 39.6
HPP92_004800 Vanilla planifolia HOM05D001014 ORTHO05D000896 1.1e-07 60.8 119 32.8
MSTRG.17141 Avicennia marina HOM05D001014 ORTHO05D000896 1.5e-07 60.5 138 34.1
unitig_22.g5779 Utricularia gibba HOM05D001014 ORTHO05D000896 1.5e-07 60.5 116 32.8
Atru.chr5.168 Acer truncatum HOM05D001014 ORTHO05D037881 2.5e-07 59.7 110 37.3
Lj7P543T31 Lonicera japonica HOM05D001014 ORTHO05D000896 2.5e-07 59.7 131 35.9
GSVIVG01005818001 Vitis vinifera HOM05D001014 ORTHO05D000896 2.5e-07 59.7 140 33.6
Duzib133G1174 Durio zibethinus HOM05D001014 ORTHO05D000896 3.2e-07 59.3 114 38.6
CAN.G402.6 Capsicum annuum HOM05D001014 ORTHO05D000896 4.2e-07 58.9 162 32.1
Aa31LG10G14510 Aethionema arabicum HOM05D001014 ORTHO05D000896 5.5e-07 58.5 120 33.3
RcHm_v2.0_Chr1g0346661 Rosa chinensis HOM05D001014 ORTHO05D000896 5.5e-07 58.5 149 30.2
Cc08_g12060 Coffea canephora HOM05D001014 ORTHO05D000896 7.2e-07 58.2 140 31.4
Duzib268G1879 Durio zibethinus HOM05D001014 ORTHO05D000896 7.2e-07 58.2 117 38.5
SGA_v2.0_scaffold43G16529 Striga asiatica HOM05D001014 ORTHO05D000896 7.2e-07 58.2 114 36.8
TAR374G1540 Trochodendron aralioides HOM05D001014 ORTHO05D000896 7.2e-07 58.2 120 32.5
Ciclev10022000m.g Citrus clementina HOM05D001014 ORTHO05D000896 9.4e-07 57.8 160 30.6
COL.COLO4_12433 Corchorus olitorius HOM05D001014 ORTHO05D000896 9.4e-07 57.8 110 37.3
CARHR170730 Cardamine hirsuta HOM05D001014 ORTHO05D000896 1.6e-06 57.0 122 35.2
Atru.chr5.167 Acer truncatum HOM05D001014 ORTHO05D037881 2.1e-06 56.6 135 33.3
Migut.B01555 Erythranthe guttata HOM05D001014 ORTHO05D000896 2.1e-06 56.6 127 32.3
Prupe.5G064500 Prunus persica HOM05D001014 ORTHO05D000896 2.1e-06 56.6 121 33.9
TAR375G0837 Trochodendron aralioides HOM05D001014 ORTHO05D000896 2.1e-06 56.6 128 30.5
AT3G60410 Arabidopsis thaliana HOM05D001014 ORTHO05D000896 2.7e-06 56.2 128 34.4
Duzib138G0015 Durio zibethinus HOM05D001014 ORTHO05D000896 2.7e-06 56.2 162 31.5
FAN10G2363 Fragaria x ananassa HOM05D001014 ORTHO05D000896 2.7e-06 56.2 99 37.4
Gorai.007G086800 Gossypium raimondii HOM05D001014 ORTHO05D000896 2.7e-06 56.2 109 36.7
Lj7C542T8 Lonicera japonica HOM05D001014 ORTHO05D000896 2.7e-06 56.2 134 32.8
SalBow5G0767 Salvia bowleyana HOM05D001014 ORTHO05D000896 2.7e-06 56.2 117 35.0
SalBow5G4056 Salvia bowleyana HOM05D001014 ORTHO05D000896 2.7e-06 56.2 117 35.0
AL5G42660 Arabidopsis lyrata HOM05D001014 ORTHO05D000896 3.6e-06 55.8 129 32.6
Gohir.D11G081100 Gossypium hirsutum HOM05D001014 ORTHO05D000896 3.6e-06 55.8 109 37.6
Ah.02g127590 Amaranthus hybridus HOM05D001014 ORTHO05D000896 4.7e-06 55.5 112 33.9
BcaC07g42782 Brassica carinata HOM05D001014 ORTHO05D000896 4.7e-06 55.5 115 35.7
BcaC07g42783 Brassica carinata HOM05D001014 ORTHO05D000896 4.7e-06 55.5 115 35.7
DCAR_025074 Daucus carota HOM05D001014 ORTHO05D000896 4.7e-06 55.5 149 30.2
Migut.N01754 Erythranthe guttata HOM05D001014 ORTHO05D000896 4.7e-06 55.5 132 33.3
Thhalv10006081m.g Eutrema salsugineum HOM05D001014 ORTHO05D000896 4.7e-06 55.5 124 34.7
HanXRQChr06g0168731 Helianthus annuus HOM05D001014 ORTHO05D000896 4.7e-06 55.5 136 30.9
Hma1.2p1_0729F.1_g209500 Hydrangea macrophylla HOM05D001014 ORTHO05D000896 4.7e-06 55.5 143 32.2
Lj3g0024136 Lotus japonicus HOM05D001014 ORTHO05D000896 4.7e-06 55.5 47 59.6
Manes.05G052800 Manihot esculenta HOM05D001014 ORTHO05D000896 4.7e-06 55.5 136 34.6
Carub.0005s2714 Capsella rubella HOM05D001014 ORTHO05D000896 6.1e-06 55.1 133 33.8
CDE06G1037 Ceratophyllum demersum HOM05D001014 ORTHO05D000896 6.1e-06 55.1 147 32.0
Duzib084G1008 Durio zibethinus HOM05D001014 ORTHO05D000896 6.1e-06 55.1 110 34.5
CiPaw.11G082600 Carya illinoinensis HOM05D001014 ORTHO05D000896 8.0e-06 54.7 121 31.4
Hma1.2p1_1740F.1_g300031 Hydrangea macrophylla HOM05D001014 ORTHO05D000896 8.0e-06 54.7 145 31.7
Lsat_1_v5_gn_7_10501 Lactuca sativa HOM05D001014 ORTHO05D000896 8.0e-06 54.7 131 33.6
vmacro13482 Vaccinium macrocarpon HOM05D001014 ORTHO05D000896 8.0e-06 54.7 149 32.9


User provided reference genes

Program Settings