Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035652.1 Olea europaea HOM05D007532 ORTHO05D009483 8.8e-106 387.1 217 100.0
Oeu055526.1 Olea europaea HOM05D007532 ORTHO05D009483 6.7e-45 184.9 214 54.7
Oeu045039.1 Olea europaea HOM05D007532 ORTHO05D009483 4.6e-38 162.2 220 49.5
Nitab4.5_0006654g0010 Nicotiana tabacum HOM05D007532 ORTHO05D009483 8.1e-35 151.4 224 43.8
Dinv31750 Davidia involucrata HOM05D010118 ORTHO05D009483 6.9e-34 148.3 215 48.8
Nitab4.5_0000020g0210 Nicotiana tabacum HOM05D007532 ORTHO05D009483 1.5e-33 147.1 224 43.3
MSTRG.10404 Avicennia marina HOM05D007532 ORTHO05D009483 3.8e-32 142.5 236 43.6
SalBow5G5402 Salvia bowleyana HOM05D007532 ORTHO05D009483 1.9e-31 140.2 226 43.4
Migut.L01834 Erythranthe guttata HOM05D007532 ORTHO05D009483 5.5e-31 138.7 240 44.2
DCAR_020715 Daucus carota HOM05D007532 ORTHO05D009483 2.6e-25 119.8 221 38.5
Actinidia32050 Actinidia chinensis HOM05D007532 ORTHO05D009483 3.4e-25 119.4 211 40.3
TAR623G0884 Trochodendron aralioides HOM05D007532 ORTHO05D009483 1.7e-24 117.1 212 41.5
Lsat_1_v5_gn_2_55700 Lactuca sativa HOM05D007532 ORTHO05D009483 5.0e-24 115.5 219 40.2
TWI74G0748 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 3.2e-23 112.8 220 37.3
SGA_v2.0_scaffold35G14004 Striga asiatica HOM05D007532 ORTHO05D009483 9.3e-23 111.3 230 37.0
Atru.chr8.1383 Acer truncatum HOM05D007532 ORTHO05D009483 3.6e-22 109.4 208 38.0
CANSAT64G0088 Cannabis sativa HOM05D007532 ORTHO05D009483 2.3e-21 106.7 213 38.0
Cfa016678 Carpinus fangiana HOM05D007532 ORTHO05D009483 3.0e-21 106.3 216 38.9
Manes.09G046800 Manihot esculenta HOM05D007532 ORTHO05D009483 3.9e-21 105.9 219 36.5
Haze_19695 Corylus avellana HOM05D007532 ORTHO05D009483 5.1e-21 105.5 216 38.4
GSVIVG01033946001 Vitis vinifera HOM05D007532 ORTHO05D009483 1.1e-20 104.4 216 36.6
Sabra06G0157400 Salix brachista HOM05D007532 ORTHO05D009483 3.3e-20 102.8 212 40.1
COL.COLO4_29593 Corchorus olitorius HOM05D007532 ORTHO05D009483 4.3e-20 102.4 228 36.8
Potri.006G204400 Populus trichocarpa HOM05D007532 ORTHO05D009483 5.7e-20 102.1 215 37.2
Gorai.006G150300 Gossypium raimondii HOM05D007532 ORTHO05D009483 2.2e-19 100.1 212 36.3
Thecc.05G102000 Theobroma cacao HOM05D007532 ORTHO05D009483 2.2e-19 100.1 214 39.3
Gohir.D09G131700 Gossypium hirsutum HOM05D007532 ORTHO05D009483 3.7e-19 99.4 212 36.8
Gohir.A09G135100 Gossypium hirsutum HOM05D007532 ORTHO05D009483 4.8e-19 99.0 216 35.6
Potri.016G071700 Populus trichocarpa HOM05D007532 ORTHO05D009483 4.8e-19 99.0 212 38.2
Rhsim03G0066200 Rhododendron simsii HOM05D007532 ORTHO05D009483 4.8e-19 99.0 210 37.1
Cpa.g.sc104.49 Carica papaya HOM05D007532 ORTHO05D009483 6.3e-19 98.6 228 36.0
PGR004G2296 Punica granatum HOM05D007532 ORTHO05D009483 1.4e-18 97.4 219 36.5
Actinidia04004 Actinidia chinensis HOM05D007532 ORTHO05D009483 2.4e-18 96.7 188 36.7
Lsat_1_v5_gn_1_57140 Lactuca sativa HOM05D007532 ORTHO05D009483 3.1e-18 96.3 203 36.9
Duzib093G1477 Durio zibethinus HOM05D007532 ORTHO05D009483 2.6e-17 93.2 220 37.3
TWI77G0050 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 2.2e-16 90.1 197 36.0
CiPaw.10G016200 Carya illinoinensis HOM05D007532 ORTHO05D009483 6.5e-16 88.6 208 34.6
Ciclev10012763m.g Citrus clementina HOM05D007532 ORTHO05D009483 1.4e-15 87.4 215 34.4
RcHm_v2.0_Chr3g0475571 Rosa chinensis HOM05D007532 ORTHO05D009483 1.9e-15 87.0 211 34.1
Lj1C1049T4 Lonicera japonica HOM05D007532 ORTHO05D009483 3.2e-15 86.3 164 36.0
QL07p037073 Quercus lobata HOM05D007532 ORTHO05D009483 4.2e-15 85.9 215 37.7
PSO384G2238 Papaver somniferum HOM05D007532 ORTHO05D009483 2.1e-14 83.6 219 37.9
PSO339G0695 Papaver somniferum HOM05D007532 ORTHO05D009483 3.6e-14 82.8 213 37.1
BcaC07g39613 Brassica carinata HOM05D007532 ORTHO05D009483 4.6e-14 82.4 223 32.7
C08p27760 Brassica napus HOM05D007532 ORTHO05D009483 4.6e-14 82.4 223 32.7
BolC8t50392H Brassica oleracea HOM05D007532 ORTHO05D009483 4.6e-14 82.4 223 32.7
FvH4_6g20110 Fragaria vesca HOM05D007532 ORTHO05D009483 4.6e-14 82.4 206 34.5
FAN14G5580 Fragaria x ananassa HOM05D007532 ORTHO05D009483 4.6e-14 82.4 206 34.5
Aqoxy1G00693 Aquilegia oxysepala HOM05D007532 ORTHO05D009483 1.0e-13 81.3 210 31.9
Nn6g34736 Nelumbo nucifera HOM05D007532 ORTHO05D009483 1.0e-13 81.3 211 35.1
Sabra16G0072100 Salix brachista HOM05D007532 ORTHO05D009483 1.0e-13 81.3 215 32.6
BcaB01g00362 Brassica carinata HOM05D007532 ORTHO05D009483 1.8e-13 80.5 221 32.6
Manes.08G032400 Manihot esculenta HOM05D007532 ORTHO05D009483 1.8e-13 80.5 210 33.3
A09p45610 Brassica napus HOM05D007532 ORTHO05D009483 3.9e-13 79.3 214 36.4
BraA09t40022Z Brassica rapa HOM05D007532 ORTHO05D009483 3.9e-13 79.3 214 36.4
Sabra16G0073900 Salix brachista HOM05D007532 ORTHO05D009483 6.7e-13 78.6 215 32.6
Phvul.007G269000 Phaseolus vulgaris HOM05D007532 ORTHO05D009483 1.1e-12 77.8 203 32.5
Gohir.D04G094900 Gossypium hirsutum HOM05D007532 ORTHO05D009483 2.0e-12 77.0 213 33.8
Gorai.009G397600 Gossypium raimondii HOM05D007532 ORTHO05D009483 2.0e-12 77.0 213 33.8
Thhalv10010711m.g Eutrema salsugineum HOM05D007532 ORTHO05D009483 2.6e-12 76.6 218 32.1
Duzib128G1100 Durio zibethinus HOM05D007532 ORTHO05D009483 7.4e-12 75.1 218 30.7
FAN05G0427 Fragaria x ananassa HOM05D007532 ORTHO05D009483 7.4e-12 75.1 203 32.5
Lj5g0000288 Lotus japonicus HOM05D007532 ORTHO05D009483 9.7e-12 74.7 205 33.7
Duzib106G1076 Durio zibethinus HOM05D007532 ORTHO05D009483 1.3e-11 74.3 216 32.9
AL5G33190 Arabidopsis lyrata HOM05D007532 ORTHO05D009483 2.2e-11 73.6 216 32.9
arahy.Tifrunner.gnm1.ann1.R0B094 Arachis hypogaea HOM05D007532 ORTHO05D009483 2.2e-11 73.6 204 32.4
arahy.Tifrunner.gnm1.ann1.U8RNVP Arachis hypogaea HOM05D007532 ORTHO05D009483 2.2e-11 73.6 204 32.4
Ca_11714_v3 Cicer arietinum L. HOM05D007532 ORTHO05D009483 2.2e-11 73.6 201 31.8
CARHR162250 Cardamine hirsuta HOM05D007532 ORTHO05D009483 4.8e-11 72.4 213 37.1
AUR62037048 Chenopodium quinoa HOM05D007532 ORTHO05D009483 6.3e-11 72.0 207 31.4
AT3G52480 Arabidopsis thaliana HOM05D007532 ORTHO05D009483 1.1e-10 71.2 212 33.0
MBI17_g22147_MAGBIO Magnolia biondii HOM05D007532 ORTHO05D009483 1.8e-10 70.5 226 32.7
MD14G1037100 Malus domestica HOM05D007532 ORTHO05D009483 1.8e-10 70.5 220 31.8
AUR62006278 Chenopodium quinoa HOM05D007532 ORTHO05D009483 5.3e-10 68.9 205 30.7
ECA238G0408 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-10 68.6 199 29.6
Carub.0005s1887 Capsella rubella HOM05D007532 ORTHO05D009483 9.1e-10 68.2 215 30.7
TPR.G31864 Trifolium pratense HOM05D007532 ORTHO05D009483 2.6e-09 66.6 202 29.7
Gohir.A04G060800 Gossypium hirsutum HOM05D007532 ORTHO05D009483 3.4e-09 66.2 213 32.4
DCAR_027636 Daucus carota HOM05D002150 ORTHO05D002191 1.3e-08 64.3 220 30.0
DCAR_016921 Daucus carota HOM05D007532 ORTHO05D009483 1.7e-08 63.9 202 32.7
Rhsim09G0165300 Rhododendron simsii HOM05D002150 ORTHO05D002191 1.7e-08 63.9 210 28.1
unitig_8.g4283 Utricularia gibba HOM05D007532 ORTHO05D009483 3.8e-08 62.8 125 36.0
Lalb_Chr02g0154541 Lupinus albus HOM05D007532 ORTHO05D009483 5.0e-08 62.4 207 30.4
Aa31LG10G7530 Aethionema arabicum HOM05D007532 ORTHO05D009483 8.5e-08 61.6 222 27.5
Medtr1g057220 Medicago truncatula HOM05D007532 ORTHO05D009483 1.9e-07 60.5 200 27.5
CSS0006598 Camellia sinensis var. sinensis HOM05D002150 ORTHO05D002191 2.5e-07 60.1 209 28.2
CSS0034701 Camellia sinensis var. sinensis HOM05D002150 ORTHO05D002191 2.5e-07 60.1 209 28.2
Sc20g0006700 Simmondsia chinensis HOM05D007532 ORTHO05D009483 2.5e-07 60.1 157 36.3
HanXRQChr14g0458181 Helianthus annuus HOM05D002150 ORTHO05D002191 3.2e-07 59.7 223 25.6
Prupe.7G097300 Prunus persica HOM05D007532 ORTHO05D009483 3.2e-07 59.7 217 31.8
ATR0772G158 Amborella trichopoda HOM05D002150 ORTHO05D002191 4.2e-07 59.3 187 29.9
Ciclev10032119m.g Citrus clementina HOM05D002150 ORTHO05D002191 1.2e-06 57.8 245 23.7
Lj8C85T13 Lonicera japonica HOM05D002150 ORTHO05D002191 1.6e-06 57.4 222 29.7
Nn5g26936 Nelumbo nucifera HOM05D002150 ORTHO05D002191 1.6e-06 57.4 221 27.1
TAR369G0649 Trochodendron aralioides HOM05D002150 ORTHO05D002191 1.6e-06 57.4 233 27.5
Cc02_g08010 Coffea canephora HOM05D002150 ORTHO05D002191 2.1e-06 57.0 224 27.7
Eucgr.A02598 Eucalyptus grandis HOM05D007532 ORTHO05D009483 2.7e-06 56.6 216 26.9
Actinidia02955 Actinidia chinensis HOM05D002150 ORTHO05D002191 6.1e-06 55.5 212 31.6
Manes.07G114700 Manihot esculenta HOM05D002150 ORTHO05D002191 6.1e-06 55.5 228 24.6
ClCG10G018450 Citrullus lanatus HOM05D007532 ORTHO05D009483 7.9e-06 55.1 206 28.2
Sp5g09820 Schrenkiella parvula HOM05D007532 ORTHO05D009483 7.9e-06 55.1 215 33.0


User provided reference genes

Program Settings