Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035574.3 Olea europaea HOM05D002184 ORTHO05D002379 1.8e-67 259.6 180 100.0
Migut.D02429 Erythranthe guttata HOM05D002184 ORTHO05D002379 9.5e-29 131.0 158 53.8
MSTRG.17699 Avicennia marina HOM05D002184 ORTHO05D002379 2.7e-23 112.8 158 44.9
CAN.G226.2 Capsicum annuum HOM05D002184 ORTHO05D002379 6.1e-20 101.7 156 42.3
TAR369G0493 Trochodendron aralioides HOM05D002184 ORTHO05D002379 1.0e-19 100.9 160 45.0
Nitab4.5_0003068g0010 Nicotiana tabacum HOM05D002184 ORTHO05D002379 1.4e-19 100.5 157 45.9
MSTRG.18769 Avicennia marina HOM05D002184 ORTHO05D002379 3.0e-19 99.4 157 43.3
TWI79G1089 Tripterygium wilfordii HOM05D002184 ORTHO05D002379 1.2e-18 97.4 159 52.2
arahy.Tifrunner.gnm1.ann1.II55D9 Arachis hypogaea HOM05D002184 ORTHO05D002379 2.0e-18 96.7 156 44.9
arahy.Tifrunner.gnm1.ann1.UI7WMA Arachis hypogaea HOM05D002184 ORTHO05D002379 2.0e-18 96.7 156 44.9
GSVIVG01036083001 Vitis vinifera HOM05D002184 ORTHO05D002379 9.8e-18 94.4 157 51.0
Sopen01g004900 Solanum pennellii HOM05D002184 ORTHO05D002379 2.2e-17 93.2 157 43.3
GSVIVG01033895001 Vitis vinifera HOM05D002184 ORTHO05D002379 2.2e-17 93.2 159 42.8
Nn8g41248 Nelumbo nucifera HOM05D002184 ORTHO05D002379 3.7e-17 92.4 152 46.1
Duzib168G1661 Durio zibethinus HOM05D002184 ORTHO05D002379 4.9e-17 92.0 157 40.8
Nn7g38235 Nelumbo nucifera HOM05D002184 ORTHO05D002379 1.8e-16 90.1 157 46.5
PGSC0003DMG400014735 Solanum tuberosum HOM05D002184 ORTHO05D002379 7.0e-16 88.2 156 43.6
CSS0012979 Camellia sinensis var. sinensis HOM05D002184 ORTHO05D002379 1.2e-15 87.4 157 43.3
Cfa009989 Carpinus fangiana HOM05D002184 ORTHO05D002379 1.6e-15 87.0 159 44.7
Nitab4.5_0000227g0350 Nicotiana tabacum HOM05D002184 ORTHO05D002379 1.6e-15 87.0 158 43.7
Solyc01g009390.4 Solanum lycopersicum HOM05D002184 ORTHO05D002379 1.6e-15 87.0 157 40.8
Lj3g0016489 Lotus japonicus HOM05D002184 ORTHO05D002379 3.5e-15 85.9 159 44.7
Manes.11G164100 Manihot esculenta HOM05D002184 ORTHO05D002379 4.6e-15 85.5 157 41.4
Cc01_g08840 Coffea canephora HOM05D002184 ORTHO05D002379 5.9e-15 85.1 158 42.4
Peaxi162Scf00345g01029 Petunia axillaris HOM05D002184 ORTHO05D002379 7.8e-15 84.7 156 41.7
CSS0010666 Camellia sinensis var. sinensis HOM05D002184 ORTHO05D002379 1.0e-14 84.3 157 45.9
Thecc.09G279100 Theobroma cacao HOM05D002184 ORTHO05D002379 2.3e-14 83.2 156 42.3
Nitab4.5_0000937g0100 Nicotiana tabacum HOM05D002184 ORTHO05D002379 3.0e-14 82.8 158 40.5
CAN.G919.40 Capsicum annuum HOM05D002184 ORTHO05D002379 1.9e-13 80.1 157 38.2
TAR623G0386 Trochodendron aralioides HOM05D002184 ORTHO05D002379 1.9e-13 80.1 158 35.4
Migut.N02475 Erythranthe guttata HOM05D002184 ORTHO05D002379 2.5e-13 79.7 158 55.1
Peaxi162Scf00091g00717 Petunia axillaris HOM05D002184 ORTHO05D002379 5.6e-13 78.6 157 39.5
QL07p038117 Quercus lobata HOM05D002184 ORTHO05D002379 5.6e-13 78.6 161 40.4
MSTRG.21028 Avicennia marina HOM05D002184 ORTHO05D002379 9.5e-13 77.8 157 43.3
Nitab4.5_0005472g0070 Nicotiana tabacum HOM05D002184 ORTHO05D002379 2.1e-12 76.6 158 39.9
Dinv22820 Davidia involucrata HOM05D002184 ORTHO05D002379 6.2e-12 75.1 157 41.4
MD11G1168500 Malus domestica HOM05D002184 ORTHO05D002379 6.2e-12 75.1 157 39.5
QL01p011868 Quercus lobata HOM05D002184 ORTHO05D002379 6.2e-12 75.1 157 41.4
Aqoxy2G01053 Aquilegia oxysepala HOM05D002184 ORTHO05D002379 1.1e-11 74.3 162 46.9
Glyma.13G314900 Glycine max HOM05D002184 ORTHO05D002379 1.4e-11 73.9 157 40.8
Potri.009G160200 Populus trichocarpa HOM05D002184 ORTHO05D002379 1.4e-11 73.9 157 38.2
SGA_v2.0_scaffold100G29605 Striga asiatica HOM05D002184 ORTHO05D002379 1.4e-11 73.9 94 48.9
Haze_23349 Corylus avellana HOM05D002184 ORTHO05D002379 1.8e-11 73.6 160 40.6
AUR62020258 Chenopodium quinoa HOM05D002184 ORTHO05D002379 5.2e-11 72.0 167 38.9
Duzib170G0847 Durio zibethinus HOM05D002184 ORTHO05D002379 8.9e-11 71.2 156 39.1
Dinv08936 Davidia involucrata HOM05D002184 ORTHO05D002379 3.4e-10 69.3 158 37.3
Hma1.2p1_0587F.1_g183980 Hydrangea macrophylla HOM05D002184 ORTHO05D002379 3.4e-10 69.3 159 44.0
Psat5g257840 Pisum sativum HOM05D002184 ORTHO05D002379 3.4e-10 69.3 156 39.7
PGSC0003DMG400005889 Solanum tuberosum HOM05D002184 ORTHO05D002379 3.4e-10 69.3 157 38.9
SGA_v2.0_scaffold22G09839 Striga asiatica HOM05D002184 ORTHO05D002379 3.4e-10 69.3 161 42.2
Sopen06g030630 Solanum pennellii HOM05D002184 ORTHO05D002379 4.4e-10 68.9 157 37.6
Gorai.004G011200 Gossypium raimondii HOM05D002184 ORTHO05D002379 5.8e-10 68.6 156 37.2
unitig_699.g19177 Utricularia gibba HOM05D002184 ORTHO05D002379 5.8e-10 68.6 155 34.2
Lj1A257G22 Lonicera japonica HOM05D002184 ORTHO05D002379 7.5e-10 68.2 158 41.1
Solyc06g074210.3 Solanum lycopersicum HOM05D002184 ORTHO05D002379 7.5e-10 68.2 157 37.6
Hma1.2p1_0820F.1_g224070 Hydrangea macrophylla HOM05D002184 ORTHO05D002379 9.8e-10 67.8 94 46.8
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 1.3e-09 67.4 157 40.8
Gohir.A08G006700 Gossypium hirsutum HOM05D002184 ORTHO05D002379 1.3e-09 67.4 156 37.8
Gohir.D08G016900 Gossypium hirsutum HOM05D002184 ORTHO05D002379 1.7e-09 67.0 156 37.2
Prupe.6G135600 Prunus persica HOM05D002184 ORTHO05D002379 2.9e-09 66.2 154 37.7
Prupe.7G101100 Prunus persica HOM05D002184 ORTHO05D002379 2.9e-09 66.2 163 41.7
COL.COLO4_34008 Corchorus olitorius HOM05D002184 ORTHO05D002379 3.7e-09 65.9 156 35.9
Dinv21164 Davidia involucrata HOM05D002184 ORTHO05D002379 3.7e-09 65.9 159 38.4
HPP92_023019 Vanilla planifolia HOM05D002184 ORTHO05D002379 3.7e-09 65.9 157 41.4
CSS0017670 Camellia sinensis var. sinensis HOM05D002184 ORTHO05D002379 6.4e-09 65.1 160 36.9
AUR62001525 Chenopodium quinoa HOM05D002184 ORTHO05D002379 6.4e-09 65.1 160 34.4
PSO339G5971 Papaver somniferum HOM05D002184 ORTHO05D002379 8.3e-09 64.7 158 31.6
RcHm_v2.0_Chr5g0045761 Rosa chinensis HOM05D002184 ORTHO05D002379 8.3e-09 64.7 151 35.8
HPP92_023059 Vanilla planifolia HOM05D002184 ORTHO05D002379 3.2e-08 62.8 157 40.8
Actinidia35472 Actinidia chinensis HOM05D002184 ORTHO05D002379 4.1e-08 62.4 94 44.7
Lalb_Chr24g0393501 Lupinus albus HOM05D002184 ORTHO05D002379 4.1e-08 62.4 156 36.5
Rhsim03G0069800 Rhododendron simsii HOM05D002184 ORTHO05D002379 5.4e-08 62.0 167 34.1
unitig_27.g25033 Utricularia gibba HOM05D002184 ORTHO05D002379 5.4e-08 62.0 154 38.3
Lj2A968G33 Lonicera japonica HOM05D002184 ORTHO05D002379 7.0e-08 61.6 182 34.6
Atru.chr8.1440 Acer truncatum HOM05D002184 ORTHO05D002379 1.2e-07 60.8 95 48.4
CiPaw.10G012600 Carya illinoinensis HOM05D002184 ORTHO05D002379 1.2e-07 60.8 163 38.7
EL10Ac7g16330 Beta vulgaris HOM05D002184 ORTHO05D002379 2.0e-07 60.1 161 52.8
Sabra16G0077700 Salix brachista HOM05D002184 ORTHO05D002379 2.0e-07 60.1 159 36.5
Sabra16G0080600 Salix brachista HOM05D002184 ORTHO05D002379 2.0e-07 60.1 159 36.5
CSS0003714 Camellia sinensis var. sinensis HOM05D002184 ORTHO05D002379 2.7e-07 59.7 102 46.1
Cpa.g.sc195.21 Carica papaya HOM05D002184 ORTHO05D002379 2.7e-07 59.7 156 34.6
Manes.08G028800 Manihot esculenta HOM05D002184 ORTHO05D002379 2.7e-07 59.7 159 38.4
CiPaw.13G133100 Carya illinoinensis HOM05D002184 ORTHO05D002379 3.5e-07 59.3 172 33.7
Manes.09G051800 Manihot esculenta HOM05D002184 ORTHO05D002379 3.5e-07 59.3 158 39.2
Sabra09G0125400 Salix brachista HOM05D002184 ORTHO05D002379 3.5e-07 59.3 158 42.4
Eucgr.B03826 Eucalyptus grandis HOM05D002184 ORTHO05D002379 4.6e-07 58.9 157 36.3
Glyma.12G186600 Glycine max HOM05D002184 ORTHO05D002379 4.6e-07 58.9 170 37.6
Ciclev10012009m.g Citrus clementina HOM05D002184 ORTHO05D002379 6.0e-07 58.5 157 36.9
Dinv31723 Davidia involucrata HOM05D002184 ORTHO05D002379 6.0e-07 58.5 160 38.1
Sc20g0006450 Simmondsia chinensis HOM05D002184 ORTHO05D002379 6.0e-07 58.5 161 36.0
SalBow3G1847 Salvia bowleyana HOM05D002184 ORTHO05D002379 7.8e-07 58.2 142 34.5
CANSAT64G0756 Cannabis sativa HOM05D002184 ORTHO05D002379 1.3e-06 57.4 165 35.8
Lj2C143T8 Lonicera japonica HOM05D002184 ORTHO05D002379 1.7e-06 57.0 157 33.8
Sed0006521 Sechium edule HOM05D002184 ORTHO05D002379 1.7e-06 57.0 168 38.1
TWI31G0363 Tripterygium wilfordii HOM05D002184 ORTHO05D002379 2.3e-06 56.6 157 45.9
Thhalv10007986m.g Eutrema salsugineum HOM05D002184 ORTHO05D002379 3.9e-06 55.8 165 34.5
SGA_v2.0_scaffold22G09836 Striga asiatica HOM05D002184 ORTHO05D002379 3.9e-06 55.8 92 42.4
Nitab4.5_0000573g0090 Nicotiana tabacum HOM05D002184 ORTHO05D002379 5.0e-06 55.5 160 36.9
Rhsim01G0203900 Rhododendron simsii HOM05D002184 ORTHO05D002379 5.0e-06 55.5 178 43.8
RcHm_v2.0_Chr3g0474851 Rosa chinensis HOM05D002184 ORTHO05D002379 6.6e-06 55.1 160 35.0
Medtr2g086970 Medicago truncatula HOM05D002184 ORTHO05D002379 8.6e-06 54.7 89 48.3
TWI77G0830 Tripterygium wilfordii HOM05D002184 ORTHO05D002379 8.6e-06 54.7 157 32.5


User provided reference genes

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