Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 3.2e-40 167.9 82 100.0
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 3.1e-19 98.2 82 61.0
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 9.0e-19 96.7 78 61.5
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 2.0e-18 95.5 83 57.8
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 3.4e-18 94.7 82 57.3
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 3.4e-18 94.7 80 61.2
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 4.5e-18 94.4 78 60.3
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 4.5e-18 94.4 80 57.5
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 5.8e-18 94.0 78 61.5
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 1.0e-17 93.2 78 59.0
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.3e-17 92.8 78 60.3
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 1.3e-17 92.8 78 60.3
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 1.7e-17 92.4 84 56.0
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 2.2e-17 92.0 84 56.0
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 2.2e-17 92.0 78 60.3
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 2.9e-17 91.7 78 57.7
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 3.8e-17 91.3 86 53.5
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 6.5e-17 90.5 78 57.7
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 6.5e-17 90.5 79 58.2
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 8.4e-17 90.1 79 55.7
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 1.1e-16 89.7 84 58.3
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 1.1e-16 89.7 84 58.3
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 1.1e-16 89.7 79 58.2
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 1.4e-16 89.4 84 53.6
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 1.4e-16 89.4 80 56.2
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 1.4e-16 89.4 81 59.3
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 1.9e-16 89.0 78 53.8
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 1.9e-16 89.0 78 57.7
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 1.9e-16 89.0 83 56.6
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 3.2e-16 88.2 90 51.1
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 3.2e-16 88.2 83 57.8
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 3.2e-16 88.2 79 54.4
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 3.2e-16 88.2 78 56.4
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 5.5e-16 87.4 80 55.0
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 5.5e-16 87.4 80 55.0
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 7.1e-16 87.0 82 52.4
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 7.1e-16 87.0 82 52.4
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 7.1e-16 87.0 82 52.4
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 9.3e-16 86.7 81 51.9
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 9.3e-16 86.7 84 56.0
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 9.3e-16 86.7 78 52.6
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 1.2e-15 86.3 82 52.4
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 1.2e-15 86.3 82 52.4
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 1.2e-15 86.3 80 53.8
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.6e-15 85.9 79 57.0
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.6e-15 85.9 79 57.0
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 4.6e-15 84.3 84 52.4
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 6.0e-15 84.0 80 51.2
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 6.0e-15 84.0 88 50.0
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 7.9e-15 83.6 80 52.5
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 7.9e-15 83.6 84 54.8
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.0e-14 83.2 85 49.4
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 1.0e-14 83.2 82 50.0
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 1.3e-14 82.8 85 55.3
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 1.3e-14 82.8 84 52.4
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 1.8e-14 82.4 78 52.6
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.8e-14 82.4 78 52.6
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 2.3e-14 82.0 83 47.0
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 5.1e-14 80.9 79 54.4
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 6.7e-14 80.5 79 55.7
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 6.7e-14 80.5 82 48.8
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 6.7e-14 80.5 79 54.4
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 8.7e-14 80.1 85 49.4
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 8.7e-14 80.1 85 49.4
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 8.7e-14 80.1 79 51.9
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 8.7e-14 80.1 80 52.5
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 1.1e-13 79.7 79 54.4
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.1e-13 79.7 79 51.9
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 1.1e-13 79.7 79 51.9
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 1.1e-13 79.7 83 51.8
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 1.9e-13 79.0 86 48.8
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.9e-13 79.0 78 56.4
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 3.3e-13 78.2 81 51.9
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 9.6e-13 76.6 85 48.2
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 3.7e-12 74.7 84 47.6
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 3.7e-12 74.7 88 50.0
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 3.7e-12 74.7 79 53.2
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 4.8e-12 74.3 77 50.6
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 6.2e-12 73.9 82 50.0
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 1.4e-11 72.8 106 41.5
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 1.4e-11 72.8 79 49.4
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 1.8e-11 72.4 77 50.6
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 2.4e-11 72.0 91 44.0
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 5.3e-11 70.9 88 44.3
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 2.6e-10 68.6 114 39.5
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 4.5e-10 67.8 78 47.4
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 2.9e-09 65.1 78 46.2
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 3.2e-08 61.6 79 39.2
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 4.2e-08 61.2 81 40.7
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 2.1e-07 58.9 51 54.9
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 5.1e-06 54.3 77 50.6


User provided reference genes

Program Settings