Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035461.1 Olea europaea HOM05D003667 ORTHO05D004397 1.1e-122 443.4 238 100.0
Migut.L01870 Erythranthe guttata HOM05D003667 ORTHO05D004397 1.7e-94 349.7 237 77.2
MSTRG.26557 Avicennia marina HOM05D003667 ORTHO05D004397 1.4e-91 340.1 234 78.2
Lj2A112G40 Lonicera japonica HOM05D003667 ORTHO05D004397 2.4e-88 329.3 235 74.0
Hma1.2p1_0106F.1_g051140 Hydrangea macrophylla HOM05D003667 ORTHO05D004397 3.6e-84 315.5 236 70.3
Actinidia06203 Actinidia chinensis HOM05D003667 ORTHO05D004397 2.3e-83 312.8 233 69.5
Ciclev10022078m.g Citrus clementina HOM05D003667 ORTHO05D004397 4.0e-83 312.0 235 68.1
SGA_v2.0_scaffold392G50657 Striga asiatica HOM05D003667 ORTHO05D004397 5.2e-83 311.6 261 66.7
Solyc07g047720.3 Solanum lycopersicum HOM05D003667 ORTHO05D004397 8.8e-83 310.8 233 69.5
CAN.G992.19 Capsicum annuum HOM05D003667 ORTHO05D004397 1.2e-82 310.5 236 69.1
SGA_v2.0_scaffold41G15803 Striga asiatica HOM05D003667 ORTHO05D004397 1.2e-82 310.5 276 63.4
PGSC0003DMG400018832 Solanum tuberosum HOM05D003667 ORTHO05D004397 1.5e-82 310.1 238 68.1
Actinidia07960 Actinidia chinensis HOM05D003667 ORTHO05D004397 4.4e-82 308.5 233 68.2
Sopen07g024170 Solanum pennellii HOM05D003667 ORTHO05D004397 4.4e-82 308.5 232 69.4
Nitab4.5_0001741g0020 Nicotiana tabacum HOM05D003667 ORTHO05D004397 5.7e-82 308.1 231 70.6
Nitab4.5_0001774g0040 Nicotiana tabacum HOM05D003667 ORTHO05D004397 1.7e-81 306.6 237 67.5
CANSAT78G1932 Cannabis sativa HOM05D003667 ORTHO05D004397 3.7e-81 305.4 231 69.7
PGSC0003DMG400006127 Solanum tuberosum HOM05D003667 ORTHO05D004397 4.8e-81 305.1 240 66.7
RcHm_v2.0_Chr5g0045181 Rosa chinensis HOM05D003667 ORTHO05D004397 1.1e-80 303.9 238 65.1
Nn6g34578 Nelumbo nucifera HOM05D003667 ORTHO05D004397 1.4e-80 303.5 235 66.8
Thecc.05G244000 Theobroma cacao HOM05D003667 ORTHO05D004397 1.4e-80 303.5 234 67.9
Eucgr.K01520 Eucalyptus grandis HOM05D003667 ORTHO05D004397 1.8e-80 303.1 231 66.7
GSVIVG01029952001 Vitis vinifera HOM05D003667 ORTHO05D004397 1.8e-80 303.1 233 66.1
ClCG04G005470 Citrullus lanatus HOM05D003667 ORTHO05D004397 4.1e-80 302.0 238 66.8
COL.COLO4_28620 Corchorus olitorius HOM05D003667 ORTHO05D004397 4.1e-80 302.0 234 66.2
CsaV3_4G012110 Cucumis sativus L. HOM05D003667 ORTHO05D004397 9.1e-80 300.8 238 66.8
Duzib106G0749 Durio zibethinus HOM05D003667 ORTHO05D004397 1.6e-79 300.1 234 66.7
FAN25G1089 Fragaria x ananassa HOM05D003667 ORTHO05D004397 2.0e-79 299.7 235 64.7
Gohir.A11G231200 Gossypium hirsutum HOM05D003667 ORTHO05D004397 2.0e-79 299.7 231 66.7
Gohir.D11G242600 Gossypium hirsutum HOM05D003667 ORTHO05D004397 2.0e-79 299.7 231 67.1
MELO3C008823.2 Cucumis melo HOM05D003667 ORTHO05D004397 2.7e-79 299.3 238 66.4
Gorai.007G256800 Gossypium raimondii HOM05D003667 ORTHO05D004397 2.7e-79 299.3 231 66.7
TWI38G1994 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 3.5e-79 298.9 238 65.5
Sed0010728 Sechium edule HOM05D003667 ORTHO05D004397 4.5e-79 298.5 233 67.0
FvH4_3g25040 Fragaria vesca HOM05D003667 ORTHO05D004397 7.7e-79 297.7 233 64.8
CSS0004374 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 1.0e-78 297.4 228 68.4
FAN11G0144 Fragaria x ananassa HOM05D003667 ORTHO05D004397 1.7e-78 296.6 233 64.4
CSS0013214 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 2.2e-78 296.2 228 68.0
ClCG02G007830 Citrullus lanatus HOM05D003667 ORTHO05D004397 2.2e-78 296.2 232 68.1
Rhsim13G0206500 Rhododendron simsii HOM05D003667 ORTHO05D004397 8.5e-78 294.3 228 68.0
FAN21G0540 Fragaria x ananassa HOM05D003667 ORTHO05D004397 1.1e-77 293.9 235 63.8
MBI17_g12494_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 1.1e-77 293.9 233 65.2
Nn7g37255 Nelumbo nucifera HOM05D003667 ORTHO05D004397 1.5e-77 293.5 229 67.2
Atru.chr2.1481 Acer truncatum HOM05D003667 ORTHO05D004397 3.2e-77 292.4 229 65.9
HanXRQChr07g0197181 Helianthus annuus HOM05D003667 ORTHO05D004397 3.2e-77 292.4 235 65.5
TAR623G0153 Trochodendron aralioides HOM05D003667 ORTHO05D004397 1.6e-76 290.0 231 66.7
MD02G1195300 Malus domestica HOM05D003667 ORTHO05D004397 2.7e-76 289.3 238 61.8
PSO170G5262 Papaver somniferum HOM05D003667 ORTHO05D004397 8.0e-76 287.7 235 62.1
Manes.09G137700 Manihot esculenta HOM05D003667 ORTHO05D004397 1.0e-75 287.3 235 63.8
Sed0016620 Sechium edule HOM05D003667 ORTHO05D004397 1.0e-75 287.3 230 66.5
unitig_8.g4943 Utricularia gibba HOM05D003667 ORTHO05D004397 3.0e-75 285.8 237 66.7
TWI38G1198 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 1.2e-74 283.9 238 63.4
THA.LOC104823778 Tarenaya hassleriana HOM05D003667 ORTHO05D004397 1.5e-74 283.5 231 65.8
Cc03_g11050 Coffea canephora HOM05D003667 ORTHO05D004397 2.0e-74 283.1 228 67.1
PSO357G0141 Papaver somniferum HOM05D003667 ORTHO05D004397 4.4e-74 282.0 235 61.7
MBI05_g12099_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 9.8e-74 280.8 215 68.8
AT2G36900 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 8.3e-73 277.7 238 60.9
Carub.0004s1876 Capsella rubella HOM05D003667 ORTHO05D004397 8.3e-73 277.7 238 61.3
Hund10761 Selenicereus undatus HOM05D003667 ORTHO05D004397 1.1e-72 277.3 227 62.1
AL4G33130 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 1.8e-72 276.6 238 60.5
Aqoxy1G00535 Aquilegia oxysepala HOM05D003667 ORTHO05D004397 3.1e-72 275.8 239 61.5
Prupe.2G153200 Prunus persica HOM05D003667 ORTHO05D004397 3.1e-72 275.8 236 61.9
Phvul.006G027100 Phaseolus vulgaris HOM05D003667 ORTHO05D004397 2.0e-71 273.1 231 62.3
Aa31LG6G14320 Aethionema arabicum HOM05D003667 ORTHO05D004397 3.5e-71 272.3 238 60.5
PSO675G2224 Papaver somniferum HOM05D003667 ORTHO05D004397 3.5e-71 272.3 229 59.8
Zm00001eb052810 Zea mays HOM05D003667 ORTHO05D004397 3.5e-71 272.3 233 60.9
Glyma.08G304700 Glycine max HOM05D003667 ORTHO05D004397 4.5e-71 271.9 230 60.9
Thhalv10017208m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 5.9e-71 271.6 238 59.2
Potri.013G062900 Populus trichocarpa HOM05D003667 ORTHO05D004397 1.3e-70 270.4 224 61.6
Sp4g19200 Schrenkiella parvula HOM05D003667 ORTHO05D004397 1.3e-70 270.4 238 59.7
SEGI_40073 Sequoiadendron giganteum HOM05D003667 ORTHO05D004397 1.7e-70 270.0 232 58.2
VMungo0540G2144 Vigna mungo HOM05D003667 ORTHO05D004397 1.7e-70 270.0 225 61.8
CARHR131380 Cardamine hirsuta HOM05D003667 ORTHO05D004397 2.3e-70 269.6 238 58.4
C04p11070 Brassica napus HOM05D003667 ORTHO05D004397 2.9e-70 269.2 238 59.2
BolC4t22755H Brassica oleracea HOM05D003667 ORTHO05D004397 2.9e-70 269.2 238 59.2
Medtr3g450200 Medicago truncatula HOM05D003667 ORTHO05D004397 2.9e-70 269.2 231 61.0
TPR.G8769 Trifolium pratense HOM05D003667 ORTHO05D004397 2.9e-70 269.2 233 63.1
PSO541G6155 Papaver somniferum HOM05D003667 ORTHO05D004397 3.8e-70 268.9 229 59.8
Ca_13917_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 8.6e-70 267.7 231 59.7
BraA05t19858Z Brassica rapa HOM05D003667 ORTHO05D004397 1.1e-69 267.3 238 58.4
Sabra13G0056100 Salix brachista HOM05D003667 ORTHO05D004397 1.1e-69 267.3 227 59.9
A05p08960 Brassica napus HOM05D003667 ORTHO05D004397 1.5e-69 266.9 238 58.4
CiPaw.03G011100 Carya illinoinensis HOM05D003667 ORTHO05D004397 1.5e-69 266.9 228 62.7
Glyma.18G114700 Glycine max HOM05D003667 ORTHO05D004397 4.2e-69 265.4 230 60.9
Cpa.g.sc28.13 Carica papaya HOM05D003667 ORTHO05D004397 7.2e-69 264.6 229 59.0
CDE10G1021 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 9.5e-69 264.2 228 61.8
arahy.Tifrunner.gnm1.ann1.FV18MX Arachis hypogaea HOM05D003667 ORTHO05D004397 1.2e-68 263.8 233 60.5
arahy.Tifrunner.gnm1.ann1.7QGR70 Arachis hypogaea HOM05D003667 ORTHO05D004397 2.1e-68 263.1 233 60.5
BcaB02g09321 Brassica carinata HOM05D003667 ORTHO05D004397 2.1e-68 263.1 239 58.6
Thhalv10014611m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 3.6e-68 262.3 238 57.6
Psat5g209680 Pisum sativum HOM05D003667 ORTHO05D004397 1.4e-67 260.4 229 59.0
Carub.0008s1055 Capsella rubella HOM05D003667 ORTHO05D004397 1.8e-67 260.0 229 59.4
Peaxi162Scf00776g00027 Petunia axillaris HOM05D003667 ORTHO05D004397 1.8e-67 260.0 226 62.8
CARHR257860 Cardamine hirsuta HOM05D003667 ORTHO05D004397 2.3e-67 259.6 235 57.9
AL8G24670 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 3.0e-67 259.2 229 59.4
Haze_14026 Corylus avellana HOM05D003667 ORTHO05D004397 4.0e-67 258.8 228 61.4
Lalb_Chr17g0348151 Lupinus albus HOM05D003667 ORTHO05D004397 4.0e-67 258.8 233 60.9
TPR.G14738 Trifolium pratense HOM05D003667 ORTHO05D004397 4.0e-67 258.8 231 59.7
DCAR_013483 Daucus carota HOM05D003667 ORTHO05D004397 8.9e-67 257.7 163 79.8
AT5G50440 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 1.2e-66 257.3 229 59.4
arahy.Tifrunner.gnm1.ann1.VNW58P Arachis hypogaea HOM05D003667 ORTHO05D004397 2.0e-66 256.5 230 60.0
Ca_06238_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 5.7e-66 255.0 233 60.1
Psat2g018160 Pisum sativum HOM05D003667 ORTHO05D004397 5.7e-66 255.0 233 58.8
Os03g0655200 Oryza sativa ssp. japonica HOM05D003667 ORTHO05D004397 7.5e-66 254.6 231 57.1
Lsat_1_v5_gn_6_31701 Lactuca sativa HOM05D003667 ORTHO05D004397 2.2e-65 253.1 234 59.8
Medtr5g090520 Medicago truncatula HOM05D003667 ORTHO05D004397 2.2e-65 253.1 233 58.4
HPP92_027259 Vanilla planifolia HOM05D003667 ORTHO05D004397 1.1e-64 250.8 177 70.6
HanXRQChr14g0453611 Helianthus annuus HOM05D003667 ORTHO05D004397 1.4e-64 250.4 236 58.5
Lj2g0005685 Lotus japonicus HOM05D003667 ORTHO05D004397 1.4e-64 250.4 231 57.1
Lsat_1_v5_gn_2_103600 Lactuca sativa HOM05D003667 ORTHO05D004397 7.8e-63 244.6 229 59.0
Mapoly0001s0234 Marchantia polymorpha HOM05D003667 ORTHO05D004397 2.9e-62 242.7 227 55.5
SMO358G0442 Selaginella moellendorffii HOM05D003667 ORTHO05D004397 1.1e-61 240.7 231 55.4
Dinv05568 Davidia involucrata HOM05D003667 ORTHO05D004397 1.1e-56 224.2 184 64.7
Pp3c11_11980 Physcomitrium patens HOM05D003667 ORTHO05D004397 7.0e-56 221.5 241 50.6
Pp3c7_13000 Physcomitrium patens HOM05D003667 ORTHO05D004397 9.2e-56 221.1 244 49.6
Prupe.7G022400 Prunus persica HOM05D003667 ORTHO05D004397 2.0e-55 219.9 161 69.6
MSTRG.10431 Avicennia marina HOM05D003667 ORTHO05D004397 7.8e-55 218.0 145 75.2
BcaC02g11814 Brassica carinata HOM05D003667 ORTHO05D004397 1.0e-54 217.6 163 66.3
AUR62008662 Chenopodium quinoa HOM05D003667 ORTHO05D004397 1.5e-53 213.8 234 52.1
Sc01g0006150 Simmondsia chinensis HOM05D003667 ORTHO05D004397 3.3e-53 212.6 177 62.1
Ah.02g128310 Amaranthus hybridus HOM05D003667 ORTHO05D004397 4.3e-53 212.2 184 63.0
Rhsim02G0195900 Rhododendron simsii HOM05D003667 ORTHO05D004397 1.6e-52 210.3 141 74.5
CiPaw.04G007600 Carya illinoinensis HOM05D003667 ORTHO05D004397 6.2e-52 208.4 159 68.6
ECA238G3478 Erigeron canadensis HOM05D003667 ORTHO05D004397 2.3e-51 206.5 234 52.6
EL10Ac7g17477 Beta vulgaris HOM05D003667 ORTHO05D004397 7.5e-50 201.4 228 50.0
unitig_578.g16057 Utricularia gibba HOM05D003667 ORTHO05D004397 1.3e-49 200.7 215 55.8
Lj6g0022641 Lotus japonicus HOM05D003667 ORTHO05D004397 4.1e-48 195.7 155 64.5
Oeu063104.1 Olea europaea HOM05D003667 ORTHO05D004397 4.6e-47 192.2 240 50.4
Nitab4.5_0001701g0060 Nicotiana tabacum HOM05D003667 ORTHO05D004397 2.3e-43 179.9 232 48.3
arahy.Tifrunner.gnm1.ann1.B982CP Arachis hypogaea HOM05D003667 ORTHO05D004397 5.8e-42 175.3 233 46.8
AagrBONN_evm.TU.Sc2ySwM_362.869 Anthoceros agrestis HOM05D003667 ORTHO05D004397 4.1e-40 169.1 193 50.3
AagrBONN_evm.TU.Sc2ySwM_117.3822 Anthoceros agrestis HOM05D003667 ORTHO05D004397 7.1e-40 168.3 190 50.5
Oeu003870.1 Olea europaea HOM05D003667 ORTHO05D004397 2.1e-39 166.8 126 71.4
Cre12.g554200 Chlamydomonas reinhardtii HOM05D003667 ORTHO05D004397 3.3e-37 159.5 231 42.4
CDE10G1036 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 1.6e-36 157.1 228 42.5
Solyc05g040100.4 Solanum lycopersicum HOM05D003667 ORTHO05D004397 2.1e-36 156.8 191 46.1
Dinv25059 Davidia involucrata HOM05D003667 ORTHO05D004397 1.1e-35 154.5 156 55.8
CSS0044789 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 5.2e-35 152.1 141 58.9
Cfa017699 Carpinus fangiana HOM05D003667 ORTHO05D004397 2.6e-34 149.8 115 67.0
Haze_20440 Corylus avellana HOM05D003667 ORTHO05D004397 4.4e-34 149.1 116 66.4
Lalb_Chr10g0106501 Lupinus albus HOM05D003667 ORTHO05D004397 1.9e-32 143.7 115 65.2
Actinidia03933 Actinidia chinensis HOM05D003667 ORTHO05D004397 6.0e-31 138.7 144 53.5
MCO05G601 Micromonas commoda HOM05D003667 ORTHO05D004397 6.0e-31 138.7 228 37.3
BcaC02g10601 Brassica carinata HOM05D003667 ORTHO05D004397 1.6e-28 130.6 183 42.1
AUR62033108 Chenopodium quinoa HOM05D003667 ORTHO05D004397 4.0e-27 125.9 90 70.0
AagrBONN_evm.TU.Sc2ySwM_368.3326 Anthoceros agrestis HOM05D003667 ORTHO05D004397 6.9e-27 125.2 181 43.6
PRCOL_00002098 Prasinoderma coloniale HOM05D003667 ORTHO05D004397 9.3e-24 114.8 236 32.6
CAN.G1036.8 Capsicum annuum HOM05D003667 ORTHO05D004397 1.1e-21 107.8 138 47.1
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-21 107.8 188 43.6
BcaB06g28959 Brassica carinata HOM05D003667 ORTHO05D004397 1.9e-21 107.1 237 34.2
arahy.Tifrunner.gnm1.ann1.K13S6W Arachis hypogaea HOM05D004599 ORTHO05D005564 9.6e-21 104.8 149 43.6
CBR_g20321 Chara braunii HOM05D003667 ORTHO05D004397 1.4e-19 100.9 94 55.3
Actinidia37807 Actinidia chinensis HOM05D003667 ORTHO05D004397 1.8e-19 100.5 177 40.7
Ah.08g213160 Amaranthus hybridus HOM05D003667 ORTHO05D004397 2.4e-19 100.1 70 70.0
CSS0038188 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 1.2e-18 97.8 87 60.9
Rhsim02G0194700 Rhododendron simsii HOM05D003667 ORTHO05D004397 5.8e-18 95.5 86 61.6
Rhsim02G0195800 Rhododendron simsii HOM05D003667 ORTHO05D004397 5.8e-18 95.5 86 61.6
Glyma.02G282800 Glycine max HOM05D003667 ORTHO05D004397 7.6e-18 95.1 116 50.0
arahy.Tifrunner.gnm1.ann1.835HL2 Arachis hypogaea HOM05D004313 ORTHO05D004397 1.3e-17 94.4 99 52.5
Nitab4.5_0002669g0010 Nicotiana tabacum HOM05D003667 ORTHO05D004397 4.2e-16 89.4 101 51.5
FAN16G1288 Fragaria x ananassa HOM05D003667 ORTHO05D004397 1.6e-15 87.4 58 67.2
BolC4t28047H Brassica oleracea HOM05D003667 ORTHO05D004397 2.3e-14 83.6 53 75.5
arahy.Tifrunner.gnm1.ann1.X6I371 Arachis hypogaea HOM05D003667 ORTHO05D004397 3.0e-14 83.2 75 60.0
arahy.Tifrunner.gnm1.ann1.SS7A45 Arachis hypogaea HOM05D000726 ORTHO05D004397 3.9e-14 82.8 89 52.8
Solyc05g040090.1 Solanum lycopersicum HOM05D003667 ORTHO05D004397 3.9e-14 82.8 87 54.0
BraA04t18306Z Brassica rapa HOM05D003667 ORTHO05D004397 1.5e-13 80.9 52 73.1
A04p28220 Brassica napus HOM05D003667 ORTHO05D004397 1.9e-13 80.5 53 73.6
C04p65580 Brassica napus HOM05D003667 ORTHO05D004397 1.9e-13 80.5 53 73.6
arahy.Tifrunner.gnm1.ann1.SJAT5A Arachis hypogaea HOM05D003667 ORTHO05D003672 4.3e-13 79.3 160 36.2
AUR62033107 Chenopodium quinoa HOM05D003667 ORTHO05D004397 2.8e-12 76.6 50 66.0
Lalb_Chr10g0106511 Lupinus albus HOM05D003667 ORTHO05D004397 3.7e-12 76.3 104 47.1
TPR.G36075 Trifolium pratense HOM05D003667 ORTHO05D004397 8.1e-12 75.1 53 66.0
HanXRQChr04g0115761 Helianthus annuus HOM05D003667 ORTHO05D004397 2.4e-11 73.6 53 69.8
C04p25660 Brassica napus HOM05D003667 ORTHO05D004397 3.1e-11 73.2 211 29.4
C05p50890 Brassica napus HOM05D003667 ORTHO05D004397 3.1e-11 73.2 211 29.4
Ah.08g213170 Amaranthus hybridus HOM05D003667 ORTHO05D004397 2.6e-10 70.1 93 45.2
COL.COLO4_28622 Corchorus olitorius HOM05D003667 ORTHO05D004397 4.9e-09 65.9 78 48.7
FvH4_3g32534 Fragaria vesca HOM05D003667 ORTHO05D004397 4.2e-08 62.8 94 41.5
Oeu032224.2 Olea europaea HOM05D003667 ORTHO05D004397 5.5e-08 62.4 44 68.2
VMungo0720G0063 Vigna mungo HOM05D003667 ORTHO05D004397 1.2e-07 61.2 79 40.5
BNapus_Darmor_BZH_scaffold_271p00010 Brassica napus HOM05D003667 ORTHO05D004397 3.5e-07 59.7 124 37.1
VMungo1383G0333 Vigna mungo HOM05D003667 ORTHO05D036049 3.9e-06 56.2 45 68.9


User provided reference genes

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