Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 0.0e+00 1115.9 566 100.0
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 2.7e-186 656.0 486 68.3
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 2.7e-183 646.0 487 66.9
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 2.0e-173 613.2 494 63.4
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 7.0e-171 604.7 488 63.5
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 1.4e-166 590.5 489 60.5
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 1.4e-166 590.5 515 61.0
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 3.1e-166 589.3 488 60.7
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 1.2e-165 587.4 488 62.5
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 3.3e-160 569.3 489 59.1
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 4.3e-160 568.9 488 60.9
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 7.3e-160 568.2 440 64.8
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 4.7e-159 565.5 489 58.5
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 6.8e-158 561.6 486 58.2
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 2.0e-157 560.1 489 58.7
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 3.4e-157 559.3 496 59.1
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 1.7e-156 557.0 495 58.4
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 6.4e-156 555.1 486 57.6
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 1.4e-155 553.9 491 57.6
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.4e-155 553.9 489 59.9
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 2.4e-155 553.1 488 57.4
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 3.2e-155 552.7 496 58.1
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 9.2e-155 551.2 496 56.7
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 1.6e-154 550.4 492 57.7
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 6.0e-154 548.5 494 58.7
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 1.0e-153 547.7 485 57.1
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 8.6e-153 544.7 490 56.7
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 1.5e-152 543.9 485 56.9
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.9e-152 543.5 486 57.0
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 7.3e-152 541.6 489 56.4
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 2.1e-151 540.0 488 56.1
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 4.7e-151 538.9 488 56.6
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 1.8e-150 537.0 512 55.5
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 2.3e-150 536.6 487 55.6
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 2.3e-150 536.6 500 55.6
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 1.2e-149 534.3 447 59.5
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 1.3e-148 530.8 487 55.0
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 2.2e-148 530.0 513 54.8
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.2e-148 530.0 447 59.5
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 2.9e-148 529.6 488 58.4
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 3.7e-148 529.3 553 54.4
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 6.4e-148 528.5 487 55.9
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 1.9e-147 526.9 486 55.6
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 5.4e-147 525.4 484 56.6
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 1.6e-146 523.9 484 53.9
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 2.1e-146 523.5 489 54.0
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 2.7e-146 523.1 497 54.1
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 1.0e-145 521.2 486 54.7
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 1.3e-145 520.8 459 58.2
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 1.1e-144 517.7 490 54.7
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 3.3e-144 516.2 488 53.3
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 1.6e-143 513.8 461 56.4
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 2.0e-141 506.9 469 53.3
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 2.6e-141 506.5 488 53.9
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 6.4e-140 501.9 490 53.7
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 6.4e-140 501.9 499 51.5
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 1.1e-139 501.1 487 52.8
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 1.4e-139 500.7 487 52.4
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 3.2e-139 499.6 494 55.3
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 7.8e-138 495.0 565 47.8
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 7.8e-138 495.0 497 53.5
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 1.7e-137 493.8 497 53.3
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 3.0e-137 493.0 450 53.6
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 3.0e-137 493.0 485 53.8
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 3.9e-137 492.7 395 64.1
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 1.1e-136 491.1 471 53.9
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 1.9e-136 490.3 416 57.7
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 3.3e-136 489.6 487 52.2
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 3.3e-136 489.6 251 100.0
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 2.4e-134 483.4 488 53.5
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 3.1e-134 483.0 485 52.6
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 2.6e-133 479.9 492 51.0
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 4.4e-133 479.2 459 53.2
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 1.4e-131 474.2 489 53.0
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 7.9e-130 468.4 438 54.8
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 7.9e-130 468.4 489 50.3
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 5.6e-128 462.2 434 53.5
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 3.6e-127 459.5 490 50.4
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 6.2e-127 458.8 492 50.4
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 6.9e-126 455.3 487 48.5
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 6.9e-126 455.3 361 62.6
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 6.9e-126 455.3 365 62.7
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 1.2e-125 454.5 486 49.6
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 1.5e-125 454.1 489 49.3
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 2.0e-125 453.8 396 59.6
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 4.5e-125 452.6 490 49.6
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 4.9e-124 449.1 491 48.7
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.6e-122 444.1 542 48.5
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 3.5e-122 443.0 487 49.1
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 5.1e-121 439.1 489 49.9
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 2.1e-119 433.7 491 48.7
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 2.1e-119 433.7 491 48.7
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 2.4e-118 430.3 487 48.5
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 5.3e-118 429.1 490 47.8
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 6.9e-118 428.7 490 47.8
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 2.6e-117 426.8 384 55.5
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 1.7e-116 424.1 491 47.7
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.4e-115 421.0 488 46.9
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 2.5e-115 420.2 491 47.3
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 1.2e-106 391.3 358 54.7
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 2.4e-102 377.1 493 42.6
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 5.3e-102 375.9 490 46.1
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 1.0e-100 371.7 393 50.4
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 2.9e-100 370.2 484 42.8
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 3.8e-92 343.2 353 51.0
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 4.8e-87 326.2 250 62.0
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 4.4e-72 276.6 495 36.8
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 2.7e-69 267.3 474 36.9
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 9.8e-64 248.8 267 50.9
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.4e-62 245.0 230 57.4
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 3.5e-61 240.4 187 64.2
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 9.5e-59 232.3 170 67.1
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 7.5e-56 222.6 281 43.1
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 2.9e-55 220.7 356 39.3
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 6.4e-55 219.5 270 46.3
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 9.2e-54 215.7 414 36.0
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.0e-44 185.7 135 65.9
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 1.1e-41 175.6 108 77.8
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 9.9e-40 169.1 238 41.2
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 3.2e-38 164.1 136 55.9
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 1.0e-36 159.1 374 30.7
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 1.5e-35 155.2 266 38.0
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 6.2e-34 149.8 277 32.9
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 4.4e-32 143.7 133 54.1
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 4.9e-31 140.2 257 36.2
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 7.3e-27 126.3 140 50.7
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 3.1e-25 120.9 109 56.9
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 1.7e-23 115.2 127 49.6
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 1.3e-20 105.5 166 39.8
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 6.4e-15 86.7 518 21.4
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 1.0e-12 79.3 137 35.8
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 5.6e-11 73.6 109 40.4
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 1.9e-06 58.5 90 42.2
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 1.9e-06 58.5 90 42.2


User provided reference genes

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