Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035356.1 Olea europaea HOM05D007157 ORTHO05D037969 3.6e-73 278.1 137 100.0
SHI04033 Sapria himalayana HOM05D007157 ORTHO05D009045 1.8e-24 116.3 135 43.7
Actinidia05885 Actinidia chinensis HOM05D007157 ORTHO05D037969 1.3e-17 93.6 90 55.6
AUR62029427 Chenopodium quinoa HOM05D007157 ORTHO05D009045 1.4e-11 73.6 61 54.1
QL09p032747 Quercus lobata HOM05D000424 ORTHO05D000355 2.8e-09 65.9 104 31.7
PGR042G0958 Punica granatum HOM05D002007 ORTHO05D000355 6.3e-09 64.7 108 30.6
ECA238G4369 Erigeron canadensis HOM05D000891 ORTHO05D000761 8.3e-09 64.3 101 28.7
SalBow6G2371 Salvia bowleyana HOM05D006569 ORTHO05D007515 1.4e-08 63.5 135 28.9
Nn5g29238 Nelumbo nucifera HOM05D007157 ORTHO05D009045 2.4e-08 62.8 44 61.4
Solyc02g085650.4 Solanum lycopersicum HOM05D001985 ORTHO05D000761 2.4e-08 62.8 110 30.0
BcaB03g12377 Brassica carinata HOM05D000891 ORTHO05D000761 4.1e-08 62.0 108 28.7
BcaC01g00449 Brassica carinata HOM05D000891 ORTHO05D000761 4.1e-08 62.0 108 28.7
A08p22340 Brassica napus HOM05D000891 ORTHO05D000761 4.1e-08 62.0 108 28.7
C03p79970 Brassica napus HOM05D000891 ORTHO05D000761 4.1e-08 62.0 108 28.7
BolC3t20249H Brassica oleracea HOM05D000891 ORTHO05D000761 4.1e-08 62.0 108 28.7
BraA08t34190Z Brassica rapa HOM05D000891 ORTHO05D000761 4.1e-08 62.0 108 28.7
CAN.G358.118 Capsicum annuum HOM05D000891 ORTHO05D000761 5.4e-08 61.6 110 30.0
QL11p003913 Quercus lobata HOM05D002007 ORTHO05D000355 9.1e-08 60.8 126 26.2
Prupe.7G151800 Prunus persica HOM05D000891 ORTHO05D000761 1.6e-07 60.1 103 27.2
CDE09G1117 Ceratophyllum demersum HOM05D007173 ORTHO05D009151 2.0e-07 59.7 130 30.0
Ciclev10025762m.g Citrus clementina HOM05D000891 ORTHO05D000761 2.7e-07 59.3 105 25.7
Ah.11g048530 Amaranthus hybridus HOM05D002453 ORTHO05D002107 3.5e-07 58.9 95 32.6
CiPaw.11G043600 Carya illinoinensis HOM05D002453 ORTHO05D002107 3.5e-07 58.9 112 28.6
CDE09G0095 Ceratophyllum demersum HOM05D006232 ORTHO05D007746 3.5e-07 58.9 128 28.9
Sopen02g030210 Solanum pennellii HOM05D004651 ORTHO05D005761 4.5e-07 58.5 110 29.1
Lsat_1_v5_gn_2_76721 Lactuca sativa HOM05D000891 ORTHO05D000761 5.9e-07 58.2 101 26.7
MBI18_g03650_MAGBIO Magnolia biondii HOM05D004783 ORTHO05D243882 7.7e-07 57.8 132 22.7
ATR0564G068 Amborella trichopoda HOM05D000424 ORTHO05D009254 1.3e-06 57.0 119 28.6
AT2G17525 Arabidopsis thaliana HOM05D006556 ORTHO05D008146 1.3e-06 57.0 108 25.9
MSTRG.23026 Avicennia marina HOM05D002453 ORTHO05D002107 1.3e-06 57.0 100 29.0
Hma1.2p1_1765F.1_g301480 Hydrangea macrophylla HOM05D000424 ORTHO05D000355 1.3e-06 57.0 104 27.9
MD15G1265700 Malus domestica HOM05D000891 ORTHO05D000761 1.3e-06 57.0 103 27.2
Potri.010G234500 Populus trichocarpa HOM05D002453 ORTHO05D002107 1.7e-06 56.6 112 26.8
PGR031G1904 Punica granatum HOM05D007570 ORTHO05D009365 2.3e-06 56.2 120 28.3
Lsat_1_v5_gn_4_139241 Lactuca sativa HOM05D004783 ORTHO05D005581 2.9e-06 55.8 124 29.0
Psat6g071360 Pisum sativum HOM05D007145 ORTHO05D008952 2.9e-06 55.8 115 27.8
Aa31LG8G14820 Aethionema arabicum HOM05D006556 ORTHO05D008146 3.8e-06 55.5 124 23.4
FAN02G1074 Fragaria x ananassa HOM05D007157 ORTHO05D009045 5.0e-06 55.1 41 61.0
arahy.Tifrunner.gnm1.ann1.V8H6G7 Arachis hypogaea HOM05D029812 ORTHO05D016663 6.6e-06 54.7 109 29.4
ClCG03G008670 Citrullus lanatus HOM05D002007 ORTHO05D000355 6.6e-06 54.7 96 30.2
Duzib133G0117 Durio zibethinus HOM05D002007 ORTHO05D000355 6.6e-06 54.7 106 27.4
Migut.M00780 Erythranthe guttata HOM05D000424 ORTHO05D000355 6.6e-06 54.7 93 31.2
unitig_8.g2885 Utricularia gibba HOM05D001779 ORTHO05D001753 6.6e-06 54.7 99 29.3
Ah.03g138540 Amaranthus hybridus HOM05D007145 ORTHO05D008952 8.6e-06 54.3 87 33.3
arahy.Tifrunner.gnm1.ann1.LQ1LZI Arachis hypogaea HOM05D007409 ORTHO05D009264 8.6e-06 54.3 99 32.3
CDE07G1153 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 8.6e-06 54.3 125 26.4
CsaV3_3G041130 Cucumis sativus L. HOM05D000891 ORTHO05D011021 8.6e-06 54.3 114 22.8
Gohir.A05G212100 Gossypium hirsutum HOM05D002007 ORTHO05D000355 8.6e-06 54.3 108 25.9
PSO384G5041 Papaver somniferum HOM05D000424 ORTHO05D000355 8.6e-06 54.3 132 23.5


User provided reference genes

Program Settings