Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 4.4e-244 847.4 403 100.0
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 5.8e-220 767.3 403 90.3
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 7.9e-217 756.9 409 87.5
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.3e-216 756.1 403 88.3
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 5.6e-215 750.7 418 84.4
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.3e-214 749.6 403 88.1
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 6.2e-214 747.3 401 88.3
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 1.1e-213 746.5 401 86.5
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 1.4e-213 746.1 403 87.1
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 1.7e-211 739.2 403 87.1
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 2.9e-211 738.4 414 85.5
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 2.9e-211 738.4 402 86.1
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 6.5e-211 737.3 403 85.9
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 8.4e-211 736.9 402 86.6
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 8.4e-211 736.9 403 86.4
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.1e-210 736.5 402 86.6
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 1.4e-210 736.1 402 85.8
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 2.5e-210 735.3 403 86.8
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 3.2e-210 734.9 391 89.0
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 1.6e-209 732.6 414 85.3
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 2.1e-209 732.3 404 84.9
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 2.7e-209 731.9 402 86.8
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 6.0e-209 730.7 403 86.6
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 1.0e-208 729.9 403 84.9
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 1.8e-208 729.2 390 86.7
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 3.0e-208 728.4 404 85.9
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 3.0e-208 728.4 391 88.5
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 5.1e-208 727.6 403 85.6
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 5.1e-208 727.6 402 84.8
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 8.7e-208 726.9 403 85.4
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 8.7e-208 726.9 403 85.4
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 1.1e-207 726.5 410 84.4
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 1.5e-207 726.1 404 84.2
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 1.9e-207 725.7 401 85.8
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 2.5e-207 725.3 403 85.4
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 3.3e-207 724.9 404 84.4
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 1.3e-206 723.0 404 83.9
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 1.6e-206 722.6 402 83.8
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.6e-206 722.6 403 83.9
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 2.1e-206 722.2 405 84.0
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 2.8e-206 721.8 389 86.6
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 2.8e-206 721.8 404 83.9
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 3.7e-206 721.5 403 84.4
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 3.7e-206 721.5 404 84.2
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 3.7e-206 721.5 402 84.3
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 2.4e-205 718.8 402 83.8
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 2.4e-205 718.8 402 84.1
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 3.1e-205 718.4 404 84.4
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 3.1e-205 718.4 395 85.1
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 3.1e-205 718.4 396 86.1
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 5.3e-205 717.6 404 83.7
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.2e-204 716.5 403 84.4
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 3.4e-204 714.9 402 83.3
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 2.2e-203 712.2 403 83.4
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 3.8e-203 711.4 397 84.6
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 1.1e-202 709.9 400 83.2
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 1.4e-202 709.5 402 82.6
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 1.4e-202 709.5 402 82.6
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.9e-202 709.1 409 82.9
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.2e-201 706.4 403 82.9
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 1.6e-201 706.1 402 83.6
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 2.1e-201 705.7 433 79.0
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 6.1e-201 704.1 402 83.3
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 1.0e-200 703.4 391 84.4
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 1.8e-200 702.6 391 85.4
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 1.8e-200 702.6 403 82.4
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 3.0e-200 701.8 403 82.6
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 6.7e-200 700.7 402 82.8
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 8.7e-200 700.3 403 80.6
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 1.9e-199 699.1 413 80.9
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 4.3e-199 698.0 403 82.1
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 7.4e-199 697.2 403 80.9
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 1.6e-198 696.0 403 80.6
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 1.6e-198 696.0 403 80.6
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 2.2e-198 695.7 403 80.6
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 2.2e-198 695.7 433 77.4
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 3.1e-197 691.8 404 80.9
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 6.9e-197 690.6 403 81.9
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 2.6e-196 688.7 401 82.8
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 3.4e-196 688.3 403 80.4
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 1.7e-195 686.0 402 81.8
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 5.0e-195 684.5 403 79.7
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 1.2e-193 679.9 406 79.6
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.3e-192 675.6 397 80.9
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 8.8e-192 673.7 385 83.1
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 4.3e-191 671.4 401 79.8
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 2.8e-190 668.7 387 79.8
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 2.8e-190 668.7 387 79.8
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 8.2e-190 667.2 420 77.9
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 5.3e-189 664.5 403 76.9
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 5.9e-188 661.0 389 79.2
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.0e-187 660.2 387 80.9
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 2.2e-187 659.1 402 78.6
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.1e-186 656.8 357 85.4
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.3e-184 649.0 380 81.3
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 2.3e-184 649.0 365 83.3
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 2.6e-183 645.6 410 74.9
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 2.6e-180 635.6 388 76.0
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 4.5e-180 634.8 388 76.0
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 3.8e-179 631.7 388 75.8
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 1.1e-178 630.2 411 75.9
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 4.2e-178 628.2 400 76.5
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 1.6e-177 626.3 403 77.2
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 2.1e-177 625.9 376 77.1
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 8.0e-177 624.0 341 85.0
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 2.2e-171 605.9 403 73.4
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 3.7e-166 588.6 325 83.7
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 8.3e-166 587.4 357 76.5
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 1.4e-165 586.6 398 70.9
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 2.4e-165 585.9 393 69.2
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.7e-163 579.7 395 68.4
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 8.5e-163 577.4 394 68.3
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 2.5e-162 575.9 305 88.9
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 9.5e-162 573.9 396 71.2
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 4.4e-159 565.1 306 87.6
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 7.3e-154 547.7 306 85.3
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 1.8e-149 533.1 346 73.7
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 4.1e-149 531.9 400 64.5
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 2.4e-141 506.1 393 61.8
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 1.4e-120 437.2 242 85.5
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 3.1e-104 382.9 207 87.4
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.2e-103 380.9 266 66.5
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 4.8e-89 332.4 372 52.2
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 6.3e-89 332.0 192 80.2
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 3.6e-84 316.2 218 72.9
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 1.8e-83 313.9 171 84.2
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 1.3e-81 307.8 157 87.9
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 1.2e-79 301.2 224 64.3
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 3.2e-77 293.1 435 39.3
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 6.5e-70 268.9 146 84.2
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 5.2e-59 232.6 173 65.3
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 7.5e-58 228.8 145 74.5
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 7.5e-42 175.6 190 51.6
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 5.0e-30 136.3 72 84.7
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 2.8e-20 104.0 204 38.7
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 1.7e-14 84.7 275 27.3
COL.COLO4_32114 Corchorus olitorius HOM05D000931 ORTHO05D002226 6.6e-06 56.2 51 54.9


User provided reference genes

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