Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 1.7e-129 466.1 246 100.0
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 1.2e-47 194.1 174 62.6
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 1.6e-47 193.7 224 54.9
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 2.1e-47 193.4 173 64.2
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 3.6e-47 192.6 169 65.1
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 1.1e-46 191.0 184 63.6
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 2.3e-46 189.9 178 62.9
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 2.3e-46 189.9 169 62.7
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 2.3e-46 189.9 169 62.7
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 3.1e-46 189.5 180 63.3
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 1.2e-45 187.6 179 63.7
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 1.5e-45 187.2 130 73.1
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 1.5e-45 187.2 180 62.8
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 2.0e-45 186.8 132 74.2
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 2.6e-45 186.4 180 62.8
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 4.4e-45 185.7 130 73.8
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 5.8e-45 185.3 180 61.1
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 7.5e-45 184.9 174 62.1
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 9.8e-45 184.5 174 62.1
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 1.3e-44 184.1 129 73.6
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 1.3e-44 184.1 178 60.7
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 1.3e-44 184.1 131 74.0
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 1.7e-44 183.7 132 73.5
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 2.2e-44 183.3 131 72.5
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 4.9e-44 182.2 184 60.3
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 8.3e-44 181.4 173 60.7
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 1.1e-43 181.0 170 59.4
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 1.1e-43 181.0 123 76.4
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 1.4e-43 180.6 178 59.0
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 1.4e-43 180.6 177 61.6
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 1.9e-43 180.3 161 62.1
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 5.4e-43 178.7 176 60.8
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 7.1e-43 178.3 141 68.1
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 9.2e-43 177.9 130 73.8
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 1.2e-42 177.6 129 72.1
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 1.2e-42 177.6 131 71.8
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 1.2e-42 177.6 130 71.5
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 1.6e-42 177.2 141 66.7
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 2.1e-42 176.8 121 76.0
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.7e-42 176.4 132 71.2
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 2.7e-42 176.4 118 76.3
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 3.5e-42 176.0 130 72.3
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 6.0e-42 175.3 128 72.7
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 7.8e-42 174.9 174 58.6
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 1.3e-41 174.1 132 70.5
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.7e-41 173.7 132 70.5
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 1.7e-41 173.7 179 58.1
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 1.7e-41 173.7 178 58.4
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 2.3e-41 173.3 132 69.7
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 3.9e-41 172.6 131 69.5
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 5.1e-41 172.2 127 71.7
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 8.6e-41 171.4 130 70.0
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 3.3e-40 169.5 167 56.3
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 3.3e-40 169.5 130 70.8
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 4.3e-40 169.1 175 58.3
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 5.6e-40 168.7 123 74.0
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 7.3e-40 168.3 180 56.1
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 9.5e-40 167.9 124 71.8
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 9.5e-40 167.9 124 71.8
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 9.5e-40 167.9 180 56.1
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 1.2e-39 167.5 170 58.2
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 1.2e-39 167.5 124 70.2
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 4.7e-39 165.6 130 65.4
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 6.2e-39 165.2 123 69.9
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 6.2e-39 165.2 124 68.5
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 1.2e-37 161.0 121 71.9
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 1.5e-37 160.6 174 56.9
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 5.8e-37 158.7 132 66.7
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 7.6e-37 158.3 144 61.1
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 9.9e-37 157.9 174 54.6
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 9.9e-37 157.9 175 57.1
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 1.7e-36 157.1 120 69.2
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 2.2e-36 156.8 186 52.7
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 2.2e-36 156.8 175 54.9
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 2.9e-36 156.4 175 57.1
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 4.9e-36 155.6 132 64.4
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 1.1e-35 154.5 121 70.2
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 5.4e-35 152.1 148 59.5
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 9.2e-35 151.4 124 66.9
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 1.2e-34 151.0 132 62.1
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 2.1e-34 150.2 132 62.1
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 2.1e-34 150.2 164 52.4
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 2.1e-34 150.2 162 53.7
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 2.1e-34 150.2 162 53.7
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 7.8e-34 148.3 171 54.4
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 1.3e-33 147.5 132 62.1
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 2.3e-33 146.7 162 53.1
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 2.3e-33 146.7 173 53.2
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 6.6e-33 145.2 162 52.5
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 2.5e-32 143.3 176 49.4
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 2.5e-32 143.3 125 58.4
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 3.3e-32 142.9 131 60.3
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 4.3e-32 142.5 172 51.2
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 4.3e-32 142.5 172 51.2
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 5.6e-32 142.1 117 65.8
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 1.2e-31 141.0 172 50.6
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 1.6e-31 140.6 177 49.2
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 4.7e-31 139.0 130 60.8
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 6.2e-31 138.7 129 60.5
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 3.1e-30 136.3 130 60.0
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.5e-29 134.0 132 59.8
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 9.9e-29 131.3 76 81.6
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 9.9e-29 131.3 131 58.0
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 3.8e-28 129.4 95 71.6
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 3.2e-27 126.3 122 59.8
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 5.4e-27 125.6 97 69.1
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 1.0e-25 121.3 124 57.3
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 1.0e-25 121.3 87 73.6
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 1.7e-25 120.6 126 54.8
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 3.0e-25 119.8 120 53.3
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 3.0e-25 119.8 171 50.3
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 3.9e-25 119.4 127 54.3
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 4.3e-24 115.9 93 68.8
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 2.8e-23 113.2 69 76.8
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 2.8e-23 113.2 69 76.8
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 8.1e-23 111.7 198 39.9
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 1.2e-21 107.8 72 69.4
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 9.9e-21 104.8 76 65.8
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 3.8e-20 102.8 103 54.4
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 1.4e-19 100.9 106 52.8
Zm00001eb414250 Zea mays HOM05D005654 ORTHO05D006438 4.2e-19 99.4 96 58.3
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 5.4e-19 99.0 68 69.1
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 6.0e-18 95.5 110 48.2
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 6.0e-18 95.5 126 51.6
SEGI_21166 Sequoiadendron giganteum HOM05D005654 ORTHO05D006438 1.8e-14 84.0 74 55.4
Zm00001eb355020 Zea mays HOM05D005654 ORTHO05D006438 2.4e-14 83.6 129 42.6
Zm00001eb035810 Zea mays HOM05D005654 ORTHO05D006438 2.2e-12 77.0 75 57.3
FAN15G1271 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.1e-11 74.7 64 68.8
Lalb_Chr02g0154671 Lupinus albus HOM05D005654 ORTHO05D006438 2.4e-11 73.6 84 47.6
Zm00001eb078300 Zea mays HOM05D000349 ORTHO05D010734 9.3e-11 71.6 75 52.0
Zm00001eb309330 Zea mays HOM05D000349 ORTHO05D006438 9.3e-11 71.6 75 52.0
MBI01_g11791_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 7.9e-10 68.6 146 39.7
SHI05467 Sapria himalayana HOM05D005654 ORTHO05D006438 3.9e-09 66.2 64 57.8
Zm00001eb093520 Zea mays HOM05D005654 ORTHO05D006438 5.6e-08 62.4 62 51.6
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 7.4e-08 62.0 46 60.9
Mapoly0001s0539 Marchantia polymorpha HOM05D024399 ORTHO05D023494 8.1e-07 58.5 87 41.4


User provided reference genes

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