Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035281.1 Olea europaea HOM05D004039 ORTHO05D004573 1.4e-70 269.6 143 100.0
Oeu062519.1 Olea europaea HOM05D051843 ORTHO05D004573 3.3e-24 115.5 155 55.5
Cpa.g.sc686.1 Carica papaya HOM05D004039 ORTHO05D004573 3.5e-10 68.9 154 35.1
Manes.08G099400 Manihot esculenta HOM05D004039 ORTHO05D004573 3.0e-09 65.9 155 34.8
Hma1.2p1_0738F.1_g210940 Hydrangea macrophylla HOM05D004039 ORTHO05D004573 5.1e-09 65.1 159 35.8
RcHm_v2.0_Chr4g0428421 Rosa chinensis HOM05D004039 ORTHO05D004573 1.5e-08 63.5 158 34.2
Haze_12527 Corylus avellana HOM05D004039 ORTHO05D004573 2.5e-08 62.8 150 32.7
Oeu038334.1 Olea europaea HOM05D051843 ORTHO05D292794 3.3e-08 62.4 83 59.0
Prupe.1G211600 Prunus persica HOM05D004039 ORTHO05D004573 7.3e-08 61.2 164 33.5
THA.LOC104827510 Tarenaya hassleriana HOM05D004039 ORTHO05D004573 7.3e-08 61.2 154 32.5
HanXRQChr10g0319941 Helianthus annuus HOM05D004039 ORTHO05D004573 1.6e-07 60.1 160 33.8
COL.COLO4_07108 Corchorus olitorius HOM05D004039 ORTHO05D004573 2.8e-07 59.3 152 32.9
FvH4_4g22190 Fragaria vesca HOM05D004039 ORTHO05D004573 2.8e-07 59.3 154 37.0
FAN07G2708 Fragaria x ananassa HOM05D004039 ORTHO05D004573 2.8e-07 59.3 154 37.0
QL03p048351 Quercus lobata HOM05D004039 ORTHO05D004573 2.8e-07 59.3 160 35.0
CiPaw.05G098500 Carya illinoinensis HOM05D004039 ORTHO05D004573 3.6e-07 58.9 154 32.5
Cfa009471 Carpinus fangiana HOM05D004039 ORTHO05D004573 4.7e-07 58.5 151 31.1
TWI75G0895 Tripterygium wilfordii HOM05D004039 ORTHO05D004573 4.7e-07 58.5 150 35.3
BraA09t36066Z Brassica rapa HOM05D004039 ORTHO05D004573 6.2e-07 58.2 150 34.7
Sabra14G0105500 Salix brachista HOM05D000032 ORTHO05D009383 6.2e-07 58.2 171 32.2
HPP92_025084 Vanilla planifolia HOM05D004039 ORTHO05D004573 6.2e-07 58.2 161 36.6
Psat3g089920 Pisum sativum HOM05D004039 ORTHO05D004573 8.1e-07 57.8 169 31.4
PGR102G1502 Punica granatum HOM05D004039 ORTHO05D004573 8.1e-07 57.8 152 31.6
VMungo1302G0001 Vigna mungo HOM05D004039 ORTHO05D004573 8.1e-07 57.8 165 33.3
AUR62012365 Chenopodium quinoa HOM05D004039 ORTHO05D004573 1.1e-06 57.4 168 31.0
Manes.04G096800 Manihot esculenta HOM05D004039 ORTHO05D004573 1.1e-06 57.4 168 33.9
Thecc.04G052000 Theobroma cacao HOM05D004039 ORTHO05D004573 1.1e-06 57.4 174 35.6
Atru.chr12.1473 Acer truncatum HOM05D004039 ORTHO05D004573 1.4e-06 57.0 163 33.1
FAN17G1354 Fragaria x ananassa HOM05D004039 ORTHO05D004573 1.4e-06 57.0 154 36.4
Lalb_Chr14g0364131 Lupinus albus HOM05D004039 ORTHO05D004573 1.4e-06 57.0 171 32.7
Lalb_Chr21g0317001 Lupinus albus HOM05D004039 ORTHO05D004573 1.4e-06 57.0 172 30.8
GSVIVG01032947001 Vitis vinifera HOM05D004039 ORTHO05D004573 2.4e-06 56.2 156 34.0
AT5G13880 Arabidopsis thaliana HOM05D004039 ORTHO05D004573 3.1e-06 55.8 150 34.7
BcaB04g19545 Brassica carinata HOM05D004039 ORTHO05D004573 3.1e-06 55.8 150 32.0
A02p37190 Brassica napus HOM05D004039 ORTHO05D004573 3.1e-06 55.8 150 31.3
CiPaw.06G111200 Carya illinoinensis HOM05D004039 ORTHO05D004573 3.1e-06 55.8 168 35.1
COL.COLO4_13404 Corchorus olitorius HOM05D004039 ORTHO05D004573 3.1e-06 55.8 178 33.1
BcaB07g29998 Brassica carinata HOM05D004039 ORTHO05D004573 4.0e-06 55.5 150 31.3
Gorai.006G002900 Gossypium raimondii HOM05D004039 ORTHO05D004573 4.0e-06 55.5 151 35.1
Medtr7g084720 Medicago truncatula HOM05D004039 ORTHO05D004573 4.0e-06 55.5 160 33.1
CSS0018669 Camellia sinensis var. sinensis HOM05D004039 ORTHO05D004573 5.2e-06 55.1 173 33.5
Cpa.g.sc70.36 Carica papaya HOM05D004039 ORTHO05D004573 5.2e-06 55.1 142 32.4
Cfa007136 Carpinus fangiana HOM05D004039 ORTHO05D004573 5.2e-06 55.1 170 33.5
Gohir.D09G002400 Gossypium hirsutum HOM05D004039 ORTHO05D004573 5.2e-06 55.1 151 35.1
Gohir.D12G146700 Gossypium hirsutum HOM05D004039 ORTHO05D004573 5.2e-06 55.1 174 32.2
Manes.11G073200 Manihot esculenta HOM05D004039 ORTHO05D004573 5.2e-06 55.1 178 29.8
C03p07240 Brassica napus HOM05D004039 ORTHO05D004573 6.8e-06 54.7 143 32.9
BolC3t13225H Brassica oleracea HOM05D004039 ORTHO05D004573 6.8e-06 54.7 143 32.9
AUR62031493 Chenopodium quinoa HOM05D004039 ORTHO05D004573 6.8e-06 54.7 168 30.4
Ciclev10030001m.g Citrus clementina HOM05D004039 ORTHO05D004573 6.8e-06 54.7 162 32.7
Dinv06937 Davidia involucrata HOM05D004039 ORTHO05D004573 6.8e-06 54.7 156 32.7
Thhalv10005412m.g Eutrema salsugineum HOM05D004039 ORTHO05D004573 6.8e-06 54.7 152 32.9
BraA02t08705Z Brassica rapa HOM05D004039 ORTHO05D004573 8.9e-06 54.3 150 30.7
TWI12G1264 Tripterygium wilfordii HOM05D004039 ORTHO05D004573 8.9e-06 54.3 162 32.1


User provided reference genes

Program Settings