Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 2.5e-93 345.5 181 100.0
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 1.1e-74 283.5 179 81.6
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.5e-74 283.1 176 81.2
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 5.7e-74 281.2 180 82.2
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 5.7e-74 281.2 178 80.3
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 1.1e-72 276.9 179 78.2
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 5.3e-72 274.6 183 77.0
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 1.2e-71 273.5 174 81.6
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 7.7e-71 270.8 180 79.4
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 1.0e-70 270.4 180 76.7
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 1.3e-70 270.0 178 76.4
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 5.0e-70 268.1 180 76.7
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 6.5e-70 267.7 179 76.0
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 2.1e-68 262.7 194 73.7
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 2.7e-68 262.3 178 74.7
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 6.1e-68 261.2 173 78.0
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 1.4e-67 260.0 179 74.3
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 3.0e-67 258.8 178 74.2
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 5.2e-67 258.1 179 73.7
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 8.8e-67 257.3 178 74.7
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 1.5e-66 256.5 174 75.3
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 2.0e-66 256.1 181 74.0
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 3.3e-66 255.4 179 72.1
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 3.3e-66 255.4 176 73.9
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 4.4e-66 255.0 177 74.6
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 9.7e-66 253.8 174 72.4
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 2.2e-65 252.7 176 73.9
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 1.1e-64 250.4 172 76.2
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 5.3e-64 248.1 181 70.7
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 5.3e-64 248.1 177 72.3
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 5.3e-64 248.1 176 70.5
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 9.1e-64 247.3 178 69.7
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 9.1e-64 247.3 179 72.6
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 2.0e-63 246.1 179 70.9
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 2.0e-63 246.1 176 69.9
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 3.5e-63 245.4 177 71.2
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 3.5e-63 245.4 178 69.7
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 4.5e-63 245.0 178 70.2
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 4.5e-63 245.0 180 71.1
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 7.7e-63 244.2 176 69.3
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 1.7e-62 243.0 173 72.8
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 2.2e-62 242.7 174 72.4
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 1.1e-61 240.4 178 68.5
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 1.1e-61 240.4 180 70.6
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 4.2e-61 238.4 174 69.5
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 9.4e-61 237.3 181 67.4
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 9.4e-61 237.3 175 69.7
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 1.6e-60 236.5 178 68.5
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 1.6e-60 236.5 175 67.4
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 2.1e-60 236.1 174 73.0
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 2.1e-60 236.1 175 69.7
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 2.7e-60 235.7 186 67.2
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 4.7e-60 235.0 178 68.5
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 1.0e-59 233.8 172 70.3
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 1.4e-59 233.4 178 68.0
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 1.4e-59 233.4 167 72.5
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 1.4e-59 233.4 178 68.0
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 2.3e-59 232.6 178 67.4
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 3.0e-59 232.3 179 68.7
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 3.0e-59 232.3 179 68.7
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 3.0e-59 232.3 178 68.0
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 6.7e-59 231.1 210 61.9
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 1.2e-58 230.3 179 68.2
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 1.2e-58 230.3 179 68.2
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 1.5e-58 229.9 172 69.2
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 1.5e-58 229.9 169 68.6
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 2.0e-58 229.6 176 68.2
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 3.3e-58 228.8 173 68.2
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 5.7e-58 228.0 165 72.7
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 1.1e-56 223.8 171 68.4
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 1.4e-56 223.4 178 65.2
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 1.8e-56 223.0 178 64.6
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 9.1e-56 220.7 166 67.5
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 1.2e-55 220.3 169 65.7
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 2.7e-55 219.2 253 53.4
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 3.5e-55 218.8 177 63.8
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 3.5e-55 218.8 179 64.2
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 5.0e-54 214.9 171 64.3
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 5.0e-54 214.9 140 76.4
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 8.5e-54 214.2 143 76.2
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 5.5e-53 211.5 143 74.1
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 2.7e-52 209.1 178 61.2
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 1.0e-51 207.2 142 73.2
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 1.8e-51 206.5 166 66.3
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 5.2e-51 204.9 149 73.2
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 2.0e-50 203.0 171 65.5
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 7.5e-50 201.1 168 63.7
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 6.3e-49 198.0 120 82.5
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 6.3e-49 198.0 142 70.4
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 1.1e-48 197.2 140 72.9
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 3.5e-47 192.2 177 58.2
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 5.9e-47 191.4 170 55.9
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 5.5e-45 184.9 118 78.8
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 2.0e-42 176.4 138 68.1
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 3.4e-42 175.6 195 50.8
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 1.7e-41 173.3 138 65.9
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 2.8e-41 172.6 171 51.5
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 4.1e-40 168.7 167 52.7
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 2.7e-39 166.0 169 47.9
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 5.0e-38 161.8 153 62.1
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 1.8e-35 153.3 123 65.0
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 5.2e-35 151.8 139 56.8
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 1.9e-29 133.3 163 42.3
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 2.5e-29 132.9 116 58.6
DCAR_021795 Daucus carota HOM05D001420 ORTHO05D009292 9.8e-26 120.9 88 69.3
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 1.1e-19 100.9 66 77.3
FAN02G0503 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.1e-13 80.9 70 61.4
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 1.9e-13 80.1 52 80.8
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 6.2e-12 75.1 40 82.5
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 2.4e-11 73.2 147 29.3
Actinidia30872 Actinidia chinensis HOM05D005765 ORTHO05D002313 1.1e-08 64.3 97 44.3


User provided reference genes

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