Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 1.3e-137 493.0 249 100.0
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 6.6e-89 331.3 230 70.9
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 4.4e-85 318.5 230 68.3
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 6.4e-84 314.7 233 67.0
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 4.1e-83 312.0 240 65.0
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 7.1e-83 311.2 230 66.1
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 2.7e-82 309.3 231 69.7
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 1.3e-81 307.0 231 64.9
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 1.7e-81 306.6 230 67.4
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 2.5e-80 302.8 230 66.5
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 4.3e-80 302.0 239 65.7
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 4.3e-80 302.0 236 66.5
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 7.3e-80 301.2 231 64.1
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 2.8e-79 299.3 240 63.8
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 3.6e-79 298.9 240 64.6
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 4.7e-79 298.5 232 63.4
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 4.7e-79 298.5 255 60.4
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 2.4e-78 296.2 231 61.9
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 5.2e-78 295.0 230 62.2
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 8.9e-78 294.3 239 64.9
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 3.4e-77 292.4 239 64.4
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 7.6e-77 291.2 230 63.5
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 1.3e-76 290.4 247 60.7
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 3.8e-76 288.9 239 61.5
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 4.9e-76 288.5 230 63.5
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 6.4e-76 288.1 230 60.9
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.1e-75 287.3 249 59.8
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 1.9e-75 286.6 230 60.9
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 1.9e-75 286.6 237 62.0
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 4.1e-75 285.4 230 62.2
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 7.1e-75 284.6 248 59.3
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 1.6e-74 283.5 230 62.6
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 2.1e-74 283.1 241 59.8
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 2.7e-74 282.7 229 62.4
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 3.9e-73 278.9 229 59.8
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 1.5e-72 276.9 229 60.7
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 1.9e-72 276.6 231 60.6
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 2.5e-72 276.2 227 65.6
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 3.3e-72 275.8 256 55.1
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 4.3e-72 275.4 229 59.0
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 4.3e-72 275.4 238 58.4
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 5.6e-72 275.0 229 59.4
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 5.6e-72 275.0 232 62.1
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 9.6e-72 274.2 234 59.0
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 1.2e-71 273.9 221 63.3
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 1.6e-71 273.5 229 57.6
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 1.6e-71 273.5 231 58.4
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 3.6e-71 272.3 241 59.3
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 1.4e-70 270.4 229 57.6
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 1.4e-70 270.4 258 57.0
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 2.4e-70 269.6 239 57.3
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 5.2e-70 268.5 219 63.5
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 5.2e-70 268.5 235 56.6
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 5.2e-70 268.5 238 59.7
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 5.2e-70 268.5 238 59.2
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 5.2e-70 268.5 235 61.7
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 6.9e-70 268.1 220 62.7
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 6.9e-70 268.1 239 56.9
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 6.9e-70 268.1 239 56.9
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 9.0e-70 267.7 241 54.4
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 1.2e-69 267.3 231 59.3
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 1.2e-69 267.3 246 54.9
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 1.5e-69 266.9 242 58.7
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 4.4e-69 265.4 229 56.3
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 5.8e-69 265.0 230 58.7
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 9.9e-69 264.2 229 55.9
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 1.7e-68 263.5 246 57.7
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 2.2e-68 263.1 231 57.6
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 1.1e-67 260.8 230 57.4
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 1.6e-66 256.9 230 58.7
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 4.6e-66 255.4 222 56.3
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 1.0e-65 254.2 247 52.6
CSS0007227 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 1.9e-64 250.0 187 65.8
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 1.9e-64 250.0 247 53.8
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.6e-63 246.9 208 61.5
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 8.1e-63 244.6 252 54.0
PSO063G7181 Papaver somniferum HOM05D006099 ORTHO05D007317 1.8e-62 243.4 194 63.9
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 4.0e-62 242.3 372 39.5
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 4.5e-61 238.8 239 54.4
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 9.3e-59 231.1 242 51.7
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 1.6e-58 230.3 233 51.9
Cpa.g.sc148.13 Carica papaya HOM05D006099 ORTHO05D007317 1.8e-57 226.9 190 57.4
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 1.8e-57 226.9 248 50.4
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 3.0e-57 226.1 240 50.4
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 3.9e-57 225.7 233 52.4
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 1.3e-55 220.7 237 52.3
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 3.1e-54 216.1 228 48.7
Hma1.2p1_1615F.1_g293700 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 6.9e-54 214.9 188 59.6
TWI32G0633 Tripterygium wilfordii HOM05D006099 ORTHO05D007317 3.4e-53 212.6 192 57.3
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 4.2e-51 205.7 243 46.5
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.9e-49 199.1 255 48.2
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.9e-49 199.1 255 48.2
HanXRQChr13g0419831 Helianthus annuus HOM05D006099 ORTHO05D007317 2.8e-47 193.0 145 62.8
unitig_32.g10951 Utricularia gibba HOM05D006099 ORTHO05D007317 4.0e-46 189.1 127 70.9
Ah.11g044160 Amaranthus hybridus HOM05D006099 ORTHO05D007317 9.0e-46 188.0 156 60.3
Os06g0663600 Oryza sativa ssp. japonica HOM05D006099 ORTHO05D007317 1.0e-44 184.5 150 59.3
Sc23g0004790 Simmondsia chinensis HOM05D006099 ORTHO05D007317 1.2e-42 177.6 256 44.1
Peaxi162Scf00876g00025 Petunia axillaris HOM05D006099 ORTHO05D007317 4.6e-42 175.6 230 48.3
HPP92_011639 Vanilla planifolia HOM05D006099 ORTHO05D007317 6.7e-41 171.8 157 55.4
Zm00001eb274500 Zea mays HOM05D006099 ORTHO05D007317 9.7e-40 167.9 158 53.8
Zm00001eb274550 Zea mays HOM05D006099 ORTHO05D007317 1.3e-39 167.5 158 53.8
vmacro05090 Vaccinium macrocarpon HOM05D006099 ORTHO05D007317 2.2e-39 166.8 122 63.9
Zm00001eb442290 Zea mays HOM05D006099 ORTHO05D007317 5.3e-38 162.2 128 60.9
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 2.0e-37 160.2 193 48.2
CDE06G2693 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 8.5e-36 154.8 214 40.7
Psat6g031520 Pisum sativum HOM05D006099 ORTHO05D007317 1.1e-35 154.5 120 63.3
BcaC08g44050 Brassica carinata HOM05D006099 ORTHO05D007317 5.1e-33 145.6 120 59.2
BolC6t36631H Brassica oleracea HOM05D006099 ORTHO05D007317 8.8e-33 144.8 119 59.7
C03p41630 Brassica napus HOM05D006099 ORTHO05D007317 4.3e-32 142.5 120 58.3
BcaC04g20481 Brassica carinata HOM05D006099 ORTHO05D007317 7.4e-32 141.7 120 58.3
C09p43040 Brassica napus HOM05D006099 ORTHO05D007317 7.4e-32 141.7 120 58.3
CARHR239060 Cardamine hirsuta HOM05D006099 ORTHO05D007317 1.3e-31 141.0 102 62.7
Prupe.1G463600 Prunus persica HOM05D006099 ORTHO05D007317 1.1e-30 137.9 108 64.8
Nitab4.5_0001327g0030 Nicotiana tabacum HOM05D006099 ORTHO05D007317 9.1e-30 134.8 117 59.8
MCO10G112 Micromonas commoda HOM05D006099 ORTHO05D007317 7.7e-29 131.7 242 36.8
Migut.A00464 Erythranthe guttata HOM05D006099 ORTHO05D007317 3.9e-25 119.4 135 47.4
Migut.A00463 Erythranthe guttata HOM05D006099 ORTHO05D007317 4.8e-23 112.5 89 65.2
MSTRG.11825 Avicennia marina HOM05D006099 ORTHO05D007317 1.1e-22 111.3 86 67.4
TPR.G30957 Trifolium pratense HOM05D006099 ORTHO05D007317 1.8e-22 110.5 82 64.6
TAR626G0599 Trochodendron aralioides HOM05D006099 ORTHO05D007317 2.6e-21 106.7 229 34.1
HPP92_011638 Vanilla planifolia HOM05D006099 ORTHO05D007317 7.7e-21 105.1 78 66.7
SHI15001 Sapria himalayana HOM05D006099 ORTHO05D007317 1.3e-20 104.4 86 58.1
unitig_32.g10950 Utricularia gibba HOM05D006099 ORTHO05D007317 1.3e-20 104.4 86 60.5
SHI15000 Sapria himalayana HOM05D000105 ORTHO05D000023 3.8e-20 102.8 109 49.5
Cre07.g346100 Chlamydomonas reinhardtii HOM05D006099 ORTHO05D007317 3.2e-19 99.8 288 29.2
TPR.G26527 Trifolium pratense HOM05D006099 ORTHO05D007317 4.7e-18 95.9 85 55.3
Zm00001eb274520 Zea mays HOM05D006099 ORTHO05D007317 4.4e-16 89.4 87 49.4
TPR.G3995 Trifolium pratense HOM05D006099 ORTHO05D007317 1.3e-15 87.8 63 63.5
CDE08G0278 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 1.7e-12 77.4 77 49.4
HPP92_011640 Vanilla planifolia HOM05D006099 ORTHO05D007317 1.7e-12 77.4 62 56.5
QL02p066379 Quercus lobata HOM05D006099 ORTHO05D007317 3.2e-11 73.2 58 60.3
SalBow8G2774 Salvia bowleyana HOM05D002799 ORTHO05D007076 3.3e-08 63.2 36 77.8


User provided reference genes

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