Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035135.1 Olea europaea HOM05D000916 ORTHO05D007921 4.4e-121 438.0 220 100.0
Oeu051786.1 Olea europaea HOM05D000916 ORTHO05D007921 6.9e-66 254.6 200 73.0
SGA_v2.0_scaffold118G32559 Striga asiatica HOM05D000916 ORTHO05D007921 2.4e-58 229.6 200 65.0
Dinv09241 Davidia involucrata HOM05D000916 ORTHO05D007921 4.1e-58 228.8 197 65.5
Migut.C01319 Erythranthe guttata HOM05D000916 ORTHO05D007921 1.3e-56 223.8 210 60.0
MSTRG.25473 Avicennia marina HOM05D000916 ORTHO05D007921 1.1e-55 220.7 200 63.0
Actinidia09044 Actinidia chinensis HOM05D000916 ORTHO05D007921 1.9e-55 219.9 200 61.0
Ca_09901_v3 Cicer arietinum L. HOM05D000916 ORTHO05D007921 1.9e-55 219.9 210 57.6
GSVIVG01037084001 Vitis vinifera HOM05D000916 ORTHO05D007921 1.9e-55 219.9 197 60.9
Medtr1g076920 Medicago truncatula HOM05D000916 ORTHO05D007921 3.2e-55 219.2 210 58.1
Cc08_g11570 Coffea canephora HOM05D000916 ORTHO05D007921 4.2e-55 218.8 199 59.8
Thecc.02G150300 Theobroma cacao HOM05D000916 ORTHO05D007921 5.5e-55 218.4 210 57.6
SalBow7G2842 Salvia bowleyana HOM05D000916 ORTHO05D007921 9.4e-55 217.6 200 60.5
TPR.G16625 Trifolium pratense HOM05D000916 ORTHO05D007921 1.2e-54 217.2 210 57.1
Glyma.20G214000 Glycine max HOM05D000916 ORTHO05D007921 2.7e-54 216.1 210 57.6
TAR629G2069 Trochodendron aralioides HOM05D000916 ORTHO05D007921 2.7e-54 216.1 197 61.9
VMungo0720G0569 Vigna mungo HOM05D000916 ORTHO05D007921 2.7e-54 216.1 210 56.7
Psat6g112920 Pisum sativum HOM05D000916 ORTHO05D007921 4.7e-54 215.3 210 57.1
Rhsim12G0000100 Rhododendron simsii HOM05D006708 ORTHO05D007921 4.7e-54 215.3 202 60.9
Haze_13434 Corylus avellana HOM05D000916 ORTHO05D007921 6.1e-54 214.9 204 59.3
Phvul.007G113800 Phaseolus vulgaris HOM05D000916 ORTHO05D007921 6.1e-54 214.9 210 56.7
Aqoxy6G00009 Aquilegia oxysepala HOM05D000916 ORTHO05D007921 1.0e-53 214.2 200 59.5
Ciclev10021413m.g Citrus clementina HOM05D000916 ORTHO05D007921 1.0e-53 214.2 210 57.6
Eucgr.F04110 Eucalyptus grandis HOM05D000916 ORTHO05D007921 1.0e-53 214.2 204 57.4
Hma1.2p1_0278F.1_g111780 Hydrangea macrophylla HOM05D000916 ORTHO05D007921 1.0e-53 214.2 200 60.5
Hma1.2p1_0278F.1_g111790 Hydrangea macrophylla HOM05D000916 ORTHO05D007921 1.0e-53 214.2 200 60.5
COL.COLO4_08311 Corchorus olitorius HOM05D000916 ORTHO05D007921 1.8e-53 213.4 188 61.7
Lj7C414G3 Lonicera japonica HOM05D000916 ORTHO05D007921 1.8e-53 213.4 199 60.3
Lalb_Chr02g0149821 Lupinus albus HOM05D000916 ORTHO05D007921 1.8e-53 213.4 210 56.2
Ciclev10020551m.g Citrus clementina HOM05D000916 ORTHO05D007921 3.0e-53 212.6 210 57.1
PGR102G2105 Punica granatum HOM05D000916 ORTHO05D007921 3.0e-53 212.6 199 60.8
arahy.Tifrunner.gnm1.ann1.G72GGE Arachis hypogaea HOM05D000916 ORTHO05D007921 5.2e-53 211.8 210 55.2
arahy.Tifrunner.gnm1.ann1.Y677VA Arachis hypogaea HOM05D000916 ORTHO05D007921 5.2e-53 211.8 210 55.2
Potri.019G063900 Populus trichocarpa HOM05D000916 ORTHO05D007921 5.2e-53 211.8 200 59.5
Cfa022925 Carpinus fangiana HOM05D000916 ORTHO05D007921 1.1e-52 210.7 204 58.3
Ciclev10020543m.g Citrus clementina HOM05D000916 ORTHO05D007921 1.5e-52 210.3 210 56.2
Lj5g0015287 Lotus japonicus HOM05D000916 ORTHO05D007921 1.5e-52 210.3 210 56.7
QL08p042529 Quercus lobata HOM05D000916 ORTHO05D007921 1.5e-52 210.3 200 60.0
Nn5g27096 Nelumbo nucifera HOM05D000916 ORTHO05D007921 2.0e-52 209.9 200 60.0
CiPaw.03G193200 Carya illinoinensis HOM05D000916 ORTHO05D007921 2.6e-52 209.5 200 58.5
ATR1089G163 Amborella trichopoda HOM05D000916 ORTHO05D007921 3.3e-52 209.1 210 55.7
Ciclev10021411m.g Citrus clementina HOM05D000916 ORTHO05D007921 3.3e-52 209.1 210 56.2
Duzib052G0187 Durio zibethinus HOM05D000916 ORTHO05D007921 3.3e-52 209.1 210 56.7
Cpa.g.sc21.224 Carica papaya HOM05D000916 ORTHO05D007921 4.4e-52 208.8 198 61.6
Gohir.A13G063400 Gossypium hirsutum HOM05D000916 ORTHO05D007921 4.4e-52 208.8 210 56.7
Gohir.D13G058800 Gossypium hirsutum HOM05D000916 ORTHO05D007921 4.4e-52 208.8 210 56.7
Sabra19G0077100 Salix brachista HOM05D000916 ORTHO05D007921 7.4e-52 208.0 200 58.5
Sabra19G0079700 Salix brachista HOM05D000916 ORTHO05D007921 7.4e-52 208.0 200 58.5
Ciclev10021643m.g Citrus clementina HOM05D000916 ORTHO05D007921 9.7e-52 207.6 210 56.2
ECA232G4321 Erigeron canadensis HOM05D000916 ORTHO05D007921 9.7e-52 207.6 204 57.8
CsaV3_6G002450 Cucumis sativus L. HOM05D000916 ORTHO05D007921 1.3e-51 207.2 217 54.4
Nitab4.5_0002275g0030 Nicotiana tabacum HOM05D000916 ORTHO05D007921 1.3e-51 207.2 200 58.5
ClCG08G002000 Citrullus lanatus HOM05D000916 ORTHO05D007921 1.7e-51 206.8 197 57.9
Sed0003753 Sechium edule HOM05D000916 ORTHO05D007921 1.7e-51 206.8 210 54.8
Gorai.013G066300 Gossypium raimondii HOM05D000916 ORTHO05D007921 2.8e-51 206.1 210 56.2
vmacro00901 Vaccinium macrocarpon HOM05D000916 ORTHO05D007921 2.8e-51 206.1 225 54.2
Ciclev10024539m.g Citrus clementina HOM05D000916 ORTHO05D007921 3.7e-51 205.7 210 55.2
CSS0018791 Camellia sinensis var. sinensis HOM05D000916 ORTHO05D007921 6.3e-51 204.9 200 58.0
Sc16g0004220 Simmondsia chinensis HOM05D000916 ORTHO05D007921 6.3e-51 204.9 195 57.9
Manes.16G046800 Manihot esculenta HOM05D000916 ORTHO05D007921 1.1e-50 204.1 200 58.5
Peaxi162Scf00047g00074 Petunia axillaris HOM05D000916 ORTHO05D007921 1.4e-50 203.8 200 57.0
Atru.chr6.10 Acer truncatum HOM05D000916 ORTHO05D007921 1.8e-50 203.4 211 56.4
CAN.G702.36 Capsicum annuum HOM05D000916 ORTHO05D007921 1.8e-50 203.4 200 57.5
Nitab4.5_0002744g0010 Nicotiana tabacum HOM05D000916 ORTHO05D007921 2.4e-50 203.0 200 57.0
CSS0033181 Camellia sinensis var. sinensis HOM05D000916 ORTHO05D007921 5.3e-50 201.8 199 57.3
Solyc02g070490.4 Solanum lycopersicum HOM05D000916 ORTHO05D007921 5.3e-50 201.8 200 57.0
PGSC0003DMG400021092 Solanum tuberosum HOM05D000916 ORTHO05D007921 5.3e-50 201.8 200 57.0
Ciclev10024267m.g Citrus clementina HOM05D000916 ORTHO05D007921 1.2e-49 200.7 217 53.9
MELO3C025041.2 Cucumis melo HOM05D000916 ORTHO05D007921 1.2e-49 200.7 197 56.9
Sopen02g019580 Solanum pennellii HOM05D000916 ORTHO05D007921 1.2e-49 200.7 200 56.5
FvH4_2g37190 Fragaria vesca HOM05D000916 ORTHO05D007921 1.6e-49 200.3 200 58.0
MD08G1001000 Malus domestica HOM05D000916 ORTHO05D007921 2.0e-49 199.9 228 53.5
RcHm_v2.0_Chr6g0304501 Rosa chinensis HOM05D000916 ORTHO05D007921 2.0e-49 199.9 197 58.4
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.6e-49 199.5 200 57.5
FAN27G0203 Fragaria x ananassa HOM05D000916 ORTHO05D007921 2.6e-49 199.5 200 57.5
Ciclev10021704m.g Citrus clementina HOM05D000916 ORTHO05D007921 3.5e-49 199.1 208 55.8
Ah.02g128670 Amaranthus hybridus HOM05D000916 ORTHO05D007921 4.5e-49 198.7 197 56.3
DCAR_014544 Daucus carota HOM05D000916 ORTHO05D007921 1.0e-48 197.6 203 53.7
Zm00001eb349130 Zea mays HOM05D000916 ORTHO05D007921 1.0e-48 197.6 200 57.5
Prupe.1G353100 Prunus persica HOM05D000916 ORTHO05D007921 1.7e-48 196.8 200 58.0
AL7G52050 Arabidopsis lyrata HOM05D000916 ORTHO05D007921 5.0e-48 195.3 197 57.9
Ciclev10024042m.g Citrus clementina HOM05D000916 ORTHO05D007921 5.0e-48 195.3 210 54.8
THA.LOC104823867 Tarenaya hassleriana HOM05D000916 ORTHO05D007921 5.0e-48 195.3 200 55.5
TWI12G0975 Tripterygium wilfordii HOM05D000916 ORTHO05D007921 5.0e-48 195.3 201 57.2
BcaC08g44384 Brassica carinata HOM05D000916 ORTHO05D007921 8.5e-48 194.5 197 57.4
Os05g0419000 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D007921 8.5e-48 194.5 201 56.7
CDE07G1353 Ceratophyllum demersum HOM05D000916 ORTHO05D007921 1.5e-47 193.7 210 51.9
BcaB02g08004 Brassica carinata HOM05D000916 ORTHO05D007921 4.2e-47 192.2 197 56.9
Thhalv10027805m.g Eutrema salsugineum HOM05D000916 ORTHO05D007921 5.5e-47 191.8 197 56.9
AUR62017447 Chenopodium quinoa HOM05D000916 ORTHO05D007921 1.2e-46 190.7 197 54.8
AT5G38520 Arabidopsis thaliana HOM05D000916 ORTHO05D007921 1.6e-46 190.3 197 56.9
Sp7g03540 Schrenkiella parvula HOM05D000916 ORTHO05D007921 2.1e-46 189.9 197 56.9
A07p19750 Brassica napus HOM05D000916 ORTHO05D007921 3.6e-46 189.1 200 56.5
EL10Ac6g13919 Beta vulgaris HOM05D000916 ORTHO05D007921 1.0e-45 187.6 221 51.1
CARHR213920 Cardamine hirsuta HOM05D000916 ORTHO05D007921 1.4e-45 187.2 200 54.5
Carub.0007s3739 Capsella rubella HOM05D000916 ORTHO05D007921 1.8e-45 186.8 197 55.3
BraA07t29675Z Brassica rapa HOM05D000916 ORTHO05D007921 2.3e-45 186.4 204 55.4
BolC6t37027H Brassica oleracea HOM05D000916 ORTHO05D007921 4.0e-45 185.7 197 56.9
PSO017G2033 Papaver somniferum HOM05D000916 ORTHO05D007921 4.0e-45 185.7 200 51.5
HPP92_022006 Vanilla planifolia HOM05D000916 ORTHO05D007921 4.0e-45 185.7 190 51.6
PSO170G3269 Papaver somniferum HOM05D000916 ORTHO05D007921 1.5e-44 183.7 200 51.0
SEGI_01401 Sequoiadendron giganteum HOM05D000916 ORTHO05D007921 2.0e-44 183.3 200 49.5
C06p18170 Brassica napus HOM05D000916 ORTHO05D007921 7.5e-44 181.4 209 53.1
MBI03_g28954_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D007921 2.8e-43 179.5 201 55.2
Aa31LG9G17030 Aethionema arabicum HOM05D000916 ORTHO05D007921 4.8e-43 178.7 197 54.8
Pp3c9_30 Physcomitrium patens HOM05D000916 ORTHO05D007921 1.6e-41 173.7 199 50.3
SMO361G0114 Selaginella moellendorffii HOM05D000916 ORTHO05D007921 1.3e-40 170.6 212 46.2
SMO361G0121 Selaginella moellendorffii HOM05D000916 ORTHO05D007921 1.3e-40 170.6 212 46.2
AUR62032516 Chenopodium quinoa HOM05D000916 ORTHO05D007921 2.2e-40 169.9 197 50.8
AagrBONN_evm.TU.Sc2ySwM_344.3663 Anthoceros agrestis HOM05D000916 ORTHO05D007921 2.9e-40 169.5 211 44.5
Mapoly0003s0136 Marchantia polymorpha HOM05D000916 ORTHO05D007921 8.5e-40 167.9 210 45.7
Lsat_1_v5_gn_4_131361 Lactuca sativa HOM05D000916 ORTHO05D007921 1.8e-37 160.2 140 64.3
unitig_749.g13874 Utricularia gibba HOM05D000916 ORTHO05D007921 8.8e-37 157.9 161 53.4
HanXRQChr09g0266951 Helianthus annuus HOM05D000916 ORTHO05D007921 1.3e-35 154.1 131 59.5
CBR_g23820 Chara braunii HOM05D000916 ORTHO05D007921 2.2e-35 153.3 217 42.9
Ciclev10023871m.g Citrus clementina HOM05D000916 ORTHO05D007921 9.1e-34 147.9 224 44.6
Ciclev10023397m.g Citrus clementina HOM05D000916 ORTHO05D007921 8.5e-32 141.4 201 45.3
Ciclev10024073m.g Citrus clementina HOM05D000916 ORTHO05D007921 1.1e-31 141.0 201 45.3
Ciclev10021706m.g Citrus clementina HOM05D000916 ORTHO05D007921 4.7e-30 135.6 114 61.4
Pp3c8_3230 Physcomitrium patens HOM05D000916 ORTHO05D026700 2.8e-22 109.8 224 33.0
AagrBONN_evm.TU.Sc2ySwM_228.3619 Anthoceros agrestis HOM05D000916 ORTHO05D026700 3.6e-22 109.4 189 36.0
Cre16.g664350 Chlamydomonas reinhardtii HOM05D000916 ORTHO05D007921 1.8e-21 107.1 199 36.2
EL10Ac8g19622 Beta vulgaris HOM05D000916 ORTHO05D007921 6.8e-21 105.1 116 50.9
SMO358G0429 Selaginella moellendorffii HOM05D000916 ORTHO05D026700 2.6e-20 103.2 190 35.3
Mapoly0012s0184 Marchantia polymorpha HOM05D000916 ORTHO05D026700 2.9e-19 99.8 189 34.9
MCO16G278 Micromonas commoda HOM05D000916 ORTHO05D007921 3.2e-18 96.3 199 35.7
PRCOL_00005801 Prasinoderma coloniale HOM05D000916 ORTHO05D007921 5.9e-17 92.0 211 35.5
FAN27G0145 Fragaria x ananassa HOM05D000916 ORTHO05D007921 1.4e-13 80.9 87 56.3
Atru.chr6.5 Acer truncatum HOM05D000916 ORTHO05D007921 2.8e-06 56.6 37 67.6


User provided reference genes

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