Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034874.1 Olea europaea HOM05D001900 ORTHO05D009822 5.9e-55 217.2 105 100.0
Oeu034875.1 Olea europaea HOM05D001900 ORTHO05D009822 5.9e-55 217.2 105 100.0
Oeu060679.1 Olea europaea HOM05D001900 ORTHO05D009822 1.7e-17 92.8 72 62.5
Migut.I00453 Erythranthe guttata HOM05D001900 ORTHO05D009822 1.6e-15 86.3 69 55.1
Lj9C614G16 Lonicera japonica HOM05D001900 ORTHO05D009822 1.6e-15 86.3 73 52.1
SalBow5G2409 Salvia bowleyana HOM05D001900 ORTHO05D009822 1.6e-15 86.3 55 65.5
PSO478G4208 Papaver somniferum HOM05D001900 ORTHO05D009822 2.2e-14 82.4 62 58.1
PSO478G4786 Papaver somniferum HOM05D001900 ORTHO05D009822 5.0e-14 81.3 68 52.9
Solyc01g081080.3 Solanum lycopersicum HOM05D001900 ORTHO05D009822 6.5e-14 80.9 68 54.4
Sopen01g032700 Solanum pennellii HOM05D001900 ORTHO05D009822 6.5e-14 80.9 68 54.4
Lsat_1_v5_gn_7_10680 Lactuca sativa HOM05D001900 ORTHO05D009822 1.1e-13 80.1 82 46.3
DCAR_025009 Daucus carota HOM05D001900 ORTHO05D009822 1.5e-13 79.7 92 45.7
Cpa.g.sc33.201 Carica papaya HOM05D001900 ORTHO05D009822 2.5e-13 79.0 59 59.3
GSVIVG01026718001 Vitis vinifera HOM05D001900 ORTHO05D009822 2.5e-13 79.0 55 61.8
Duzib068G0353 Durio zibethinus HOM05D001900 ORTHO05D009822 5.5e-13 77.8 68 54.4
Manes.09G009000 Manihot esculenta HOM05D001900 ORTHO05D009822 5.5e-13 77.8 52 63.5
Aqoxy3G02315 Aquilegia oxysepala HOM05D001900 ORTHO05D009822 7.2e-13 77.4 68 51.5
Cc02_g26280 Coffea canephora HOM05D001900 ORTHO05D009822 7.2e-13 77.4 69 52.2
DCAR_029556 Daucus carota HOM05D001900 ORTHO05D009822 7.2e-13 77.4 60 58.3
TAR629G0128 Trochodendron aralioides HOM05D001900 ORTHO05D009822 7.2e-13 77.4 68 54.4
Actinidia05814 Actinidia chinensis HOM05D001900 ORTHO05D009822 9.5e-13 77.0 69 52.2
Dinv43982 Davidia involucrata HOM05D001900 ORTHO05D009822 9.5e-13 77.0 72 50.0
MBI04_g33885_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 9.5e-13 77.0 57 61.4
Thecc.03G317800 Theobroma cacao HOM05D001900 ORTHO05D009822 1.2e-12 76.6 69 50.7
Atru.chr5.3 Acer truncatum HOM05D001900 ORTHO05D009822 2.7e-12 75.5 69 50.7
Lj9A612T47 Lonicera japonica HOM05D001900 ORTHO05D009822 2.7e-12 75.5 54 57.4
TWI23G0622 Tripterygium wilfordii HOM05D001900 ORTHO05D009822 2.7e-12 75.5 69 47.8
Lj7A558G40 Lonicera japonica HOM05D001900 ORTHO05D009822 3.6e-12 75.1 69 49.3
Gohir.D01G189200 Gossypium hirsutum HOM05D001900 ORTHO05D009822 8.0e-12 73.9 68 50.0
Gorai.002G232800 Gossypium raimondii HOM05D001900 ORTHO05D009822 8.0e-12 73.9 68 50.0
CSS0049577 Camellia sinensis var. sinensis HOM05D001900 ORTHO05D009822 1.0e-11 73.6 67 50.7
Duzib093G0448 Durio zibethinus HOM05D001900 ORTHO05D009822 1.0e-11 73.6 68 51.5
FAN01G1173 Fragaria x ananassa HOM05D001900 ORTHO05D009822 1.0e-11 73.6 51 58.8
FAN03G2269 Fragaria x ananassa HOM05D001900 ORTHO05D009822 1.0e-11 73.6 51 58.8
FAN10G3152 Fragaria x ananassa HOM05D001900 ORTHO05D009822 1.0e-11 73.6 51 58.8
RcHm_v2.0_Chr1g0341191 Rosa chinensis HOM05D001900 ORTHO05D009822 1.0e-11 73.6 51 60.8
FAN06G3246 Fragaria x ananassa HOM05D001900 ORTHO05D009822 1.8e-11 72.8 51 58.8
MBI04_g28367_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.8e-11 72.8 52 61.5
TPR.G38535 Trifolium pratense HOM05D001900 ORTHO05D009822 1.8e-11 72.8 69 47.8
Gohir.A01G199100 Gossypium hirsutum HOM05D001900 ORTHO05D009822 2.3e-11 72.4 68 48.5
Ciclev10024044m.g Citrus clementina HOM05D001900 ORTHO05D009822 3.0e-11 72.0 69 50.7
PGR083G1425 Punica granatum HOM05D001900 ORTHO05D009822 3.0e-11 72.0 69 49.3
CANSAT25G3499 Cannabis sativa HOM05D001900 ORTHO05D009822 5.2e-11 71.2 52 57.7
ECA236G3998 Erigeron canadensis HOM05D001900 ORTHO05D009822 6.8e-11 70.9 69 46.4
Lj1g0008985 Lotus japonicus HOM05D001900 ORTHO05D009822 6.8e-11 70.9 80 41.2
Medtr3g118160 Medicago truncatula HOM05D001900 ORTHO05D009822 6.8e-11 70.9 69 44.9
Prupe.2G108000 Prunus persica HOM05D001900 ORTHO05D009822 6.8e-11 70.9 51 58.8
CAN.G700.25 Capsicum annuum HOM05D001900 ORTHO05D009822 8.8e-11 70.5 48 62.5
TWI59G1258 Tripterygium wilfordii HOM05D001900 ORTHO05D009822 8.8e-11 70.5 69 44.9
HanXRQChr04g0123561 Helianthus annuus HOM05D001900 ORTHO05D009822 1.5e-10 69.7 57 56.1
Glyma.06G002200 Glycine max HOM05D001900 ORTHO05D009822 2.0e-10 69.3 69 43.5
VMungo1309G1285 Vigna mungo HOM05D001900 ORTHO05D009822 2.0e-10 69.3 69 43.5
Ca_15288_v3 Cicer arietinum L. HOM05D001900 ORTHO05D009822 3.4e-10 68.6 55 54.5
Os10g0574500 Oryza sativa ssp. japonica HOM05D001900 ORTHO05D009822 3.4e-10 68.6 79 40.5
Psat5g001640 Pisum sativum HOM05D001900 ORTHO05D009822 4.4e-10 68.2 69 44.9
Sed0002012 Sechium edule HOM05D001900 ORTHO05D009822 5.7e-10 67.8 51 51.0
Phvul.009G118000 Phaseolus vulgaris HOM05D001900 ORTHO05D009822 1.3e-09 66.6 69 42.0
ATR0665G407 Amborella trichopoda HOM05D001900 ORTHO05D009822 2.2e-09 65.9 61 47.5
Zm00001eb024430 Zea mays HOM05D001900 ORTHO05D009822 4.9e-09 64.7 79 35.4
Hma1.2p1_0915F.1_g236310 Hydrangea macrophylla HOM05D001900 ORTHO05D009822 6.3e-09 64.3 89 37.1
MELO3C006229.2 Cucumis melo HOM05D001900 ORTHO05D009822 8.3e-09 63.9 51 47.1
Hma1.2p1_2755F.1_g327980 Hydrangea macrophylla HOM05D001900 ORTHO05D009822 1.4e-08 63.2 88 37.5
AagrBONN_evm.TU.Sc2ySwM_117.1440 Anthoceros agrestis HOM05D001900 ORTHO05D003003 1.0e-06 57.0 81 40.7
Potri.003G093400 Populus trichocarpa HOM05D001900 ORTHO05D009822 2.9e-06 55.5 68 35.3


User provided reference genes

Program Settings