Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034799.1 Olea europaea HOM05D005029 ORTHO05D006052 7.2e-136 487.3 249 100.0
Dinv41171 Davidia involucrata HOM05D005029 ORTHO05D006052 3.0e-81 305.8 250 67.2
MSTRG.26542 Avicennia marina HOM05D005029 ORTHO05D006052 2.8e-79 299.3 251 66.1
Gohir.D13G213100 Gossypium hirsutum HOM05D005029 ORTHO05D006052 1.8e-78 296.6 250 65.6
Gorai.013G243400 Gossypium raimondii HOM05D005029 ORTHO05D006052 1.8e-78 296.6 250 65.6
Gohir.A13G208700 Gossypium hirsutum HOM05D005029 ORTHO05D006052 2.6e-77 292.7 250 64.8
COL.COLO4_08419 Corchorus olitorius HOM05D005029 ORTHO05D006052 1.3e-76 290.4 249 63.9
Duzib170G0048 Durio zibethinus HOM05D005029 ORTHO05D006052 3.5e-74 282.3 250 63.2
Nitab4.5_0000617g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 1.7e-73 280.0 251 62.9
Duzib150G1033 Durio zibethinus HOM05D005029 ORTHO05D006052 3.0e-73 279.3 250 63.2
SGA_v2.0_scaffold31G12759 Striga asiatica HOM05D005029 ORTHO05D006052 6.6e-73 278.1 251 63.3
Thecc.09G185600 Theobroma cacao HOM05D005029 ORTHO05D006052 1.9e-72 276.6 251 62.5
Haze_22015 Corylus avellana HOM05D005029 ORTHO05D006052 3.3e-72 275.8 250 63.2
EL10Ac8g18332 Beta vulgaris HOM05D005029 ORTHO05D006052 5.6e-72 275.0 248 61.3
Glyma.15G165600 Glycine max HOM05D005029 ORTHO05D006052 2.1e-71 273.1 247 61.5
Actinidia01279 Actinidia chinensis HOM05D005029 ORTHO05D006052 2.8e-71 272.7 254 61.4
Phvul.009G236500 Phaseolus vulgaris HOM05D005029 ORTHO05D006052 1.8e-70 270.0 247 59.1
CiPaw.08G032800 Carya illinoinensis HOM05D005029 ORTHO05D006052 2.4e-70 269.6 250 61.2
Cfa013448 Carpinus fangiana HOM05D005029 ORTHO05D006052 6.9e-70 268.1 250 62.0
Glyma.09G059300 Glycine max HOM05D005029 ORTHO05D006052 6.9e-70 268.1 247 60.7
CiPaw.07G196600 Carya illinoinensis HOM05D005029 ORTHO05D006052 1.2e-69 267.3 250 61.2
Cc00_g10760 Coffea canephora HOM05D005029 ORTHO05D006052 3.4e-69 265.8 252 63.1
VMungo1309G1415 Vigna mungo HOM05D005029 ORTHO05D006052 3.4e-69 265.8 247 58.7
Peaxi162Scf01600g00016 Petunia axillaris HOM05D005029 ORTHO05D006052 7.6e-69 264.6 251 61.0
AUR62021347 Chenopodium quinoa HOM05D005029 ORTHO05D006052 1.3e-68 263.8 249 56.2
Cpa.g.c27842.2 Carica papaya HOM05D005029 ORTHO05D006052 2.9e-68 262.7 252 58.7
TAR626G1810 Trochodendron aralioides HOM05D005029 ORTHO05D006052 2.9e-68 262.7 249 59.8
MD16G1249500 Malus domestica HOM05D005029 ORTHO05D006052 1.1e-67 260.8 251 59.4
Medtr2g037940 Medicago truncatula HOM05D005029 ORTHO05D006052 2.4e-67 259.6 248 60.1
Ca_02102_v3 Cicer arietinum L. HOM05D005029 ORTHO05D006052 4.2e-67 258.8 236 61.9
CANSAT11G1104 Cannabis sativa HOM05D005029 ORTHO05D006052 1.2e-66 257.3 253 59.3
Psat1g145480 Pisum sativum HOM05D005029 ORTHO05D006052 1.2e-66 257.3 247 58.7
Solyc07g008780.3 Solanum lycopersicum HOM05D005029 ORTHO05D006052 1.6e-66 256.9 251 59.8
Sopen07g004720 Solanum pennellii HOM05D005029 ORTHO05D006052 2.1e-66 256.5 251 60.2
AUR62033261 Chenopodium quinoa HOM05D005029 ORTHO05D006052 4.6e-66 255.4 250 58.0
Potri.006G075900 Populus trichocarpa HOM05D005029 ORTHO05D006052 4.6e-66 255.4 251 59.8
Nitab4.5_0008862g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 6.0e-66 255.0 252 59.1
Manes.06G020200 Manihot esculenta HOM05D005029 ORTHO05D006052 2.3e-65 253.1 250 60.0
DCAR_030818 Daucus carota HOM05D005029 ORTHO05D006052 3.0e-65 252.7 249 59.8
Migut.L01885 Erythranthe guttata HOM05D005029 ORTHO05D006052 3.9e-65 252.3 251 60.6
Lj6g0016757 Lotus japonicus HOM05D005029 ORTHO05D006052 3.9e-65 252.3 247 57.5
HanXRQChr13g0426591 Helianthus annuus HOM05D005029 ORTHO05D006052 6.6e-65 251.5 256 59.4
Lsat_1_v5_gn_3_137280 Lactuca sativa HOM05D005029 ORTHO05D006052 8.7e-65 251.1 256 57.0
Ah.09g230060 Amaranthus hybridus HOM05D005029 ORTHO05D006052 1.5e-64 250.4 258 57.4
Hund26310 Selenicereus undatus HOM05D005029 ORTHO05D006052 1.5e-64 250.4 248 56.0
Carub.0007s1068 Capsella rubella HOM05D005029 ORTHO05D006052 3.3e-64 249.2 250 62.4
PGSC0003DMG400028729 Solanum tuberosum HOM05D005029 ORTHO05D006052 4.3e-64 248.8 251 59.0
Prupe.1G076300 Prunus persica HOM05D005029 ORTHO05D006052 7.3e-64 248.1 254 58.3
TAR383G0036 Trochodendron aralioides HOM05D005029 ORTHO05D006052 1.6e-63 246.9 249 57.0
Sp7g27770 Schrenkiella parvula HOM05D005029 ORTHO05D006052 8.1e-63 244.6 251 61.8
AL7G22280 Arabidopsis lyrata HOM05D005029 ORTHO05D006052 1.1e-62 244.2 250 58.8
THA.LOC104803957 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 1.4e-62 243.8 249 57.8
THA.LOC104803983 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 1.4e-62 243.8 249 57.8
TPR.G7936 Trifolium pratense HOM05D005029 ORTHO05D006052 1.4e-62 243.8 235 59.6
BolC3t21207H Brassica oleracea HOM05D005029 ORTHO05D006052 1.8e-62 243.4 250 59.6
Thhalv10025919m.g Eutrema salsugineum HOM05D005029 ORTHO05D006052 1.8e-62 243.4 250 60.4
Lalb_Chr11g0074801 Lupinus albus HOM05D005029 ORTHO05D006052 2.4e-62 243.0 246 57.3
CARHR237880 Cardamine hirsuta HOM05D005029 ORTHO05D006052 5.3e-62 241.9 251 60.2
Eucgr.C00120 Eucalyptus grandis HOM05D005029 ORTHO05D006052 5.3e-62 241.9 249 56.2
BcaNung00506 Brassica carinata HOM05D005029 ORTHO05D006052 1.5e-61 240.4 252 63.1
FvH4_4g07340 Fragaria vesca HOM05D005029 ORTHO05D006052 2.0e-61 240.0 253 56.9
Nn7g36649 Nelumbo nucifera HOM05D005029 ORTHO05D006052 2.0e-61 240.0 249 55.4
Sabra18G0116800 Salix brachista HOM05D005029 ORTHO05D006052 2.6e-61 239.6 249 57.4
FAN07G2409 Fragaria x ananassa HOM05D005029 ORTHO05D006052 3.4e-61 239.2 250 57.2
FAN12G1304 Fragaria x ananassa HOM05D005029 ORTHO05D006052 5.8e-61 238.4 251 57.0
FAN17G0071 Fragaria x ananassa HOM05D005029 ORTHO05D006052 7.6e-61 238.0 259 54.1
Potri.018G143000 Populus trichocarpa HOM05D005029 ORTHO05D006052 7.6e-61 238.0 249 57.8
BcaC01g01206 Brassica carinata HOM05D005029 ORTHO05D006052 2.2e-60 236.5 253 58.5
Ah.14g083530 Amaranthus hybridus HOM05D005029 ORTHO05D006052 2.9e-60 236.1 250 55.2
Dinv25437 Davidia involucrata HOM05D005029 ORTHO05D006052 8.4e-60 234.6 229 59.4
GSVIVG01010867001 Vitis vinifera HOM05D005029 ORTHO05D006052 1.1e-59 234.2 250 55.2
Sabra06G0056600 Salix brachista HOM05D005029 ORTHO05D006052 1.4e-59 233.8 257 56.4
FAN22G0020 Fragaria x ananassa HOM05D005029 ORTHO05D006052 1.9e-59 233.4 253 53.8
RcHm_v2.0_Chr4g0399711 Rosa chinensis HOM05D005029 ORTHO05D006052 3.2e-59 232.6 253 56.1
TWI34G0612 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 4.2e-59 232.3 254 56.3
AT4G29960 Arabidopsis thaliana HOM05D005029 ORTHO05D006052 1.2e-58 230.7 250 57.2
TWI32G0396 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 2.7e-58 229.6 253 56.1
Aqoxy7G02787 Aquilegia oxysepala HOM05D005029 ORTHO05D006052 3.5e-58 229.2 250 54.4
Aa31LG2G20590 Aethionema arabicum HOM05D005029 ORTHO05D006052 6.0e-58 228.4 253 57.7
arahy.Tifrunner.gnm1.ann1.K38ATV Arachis hypogaea HOM05D005029 ORTHO05D006052 1.3e-57 227.3 254 54.3
CsaV3_1G031840 Cucumis sativus L. HOM05D005029 ORTHO05D006052 1.8e-57 226.9 257 53.7
MBI13_g01742_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 3.9e-57 225.7 249 52.2
QL02p046501 Quercus lobata HOM05D005029 ORTHO05D006052 2.5e-56 223.0 352 44.6
BraA08t33909Z Brassica rapa HOM05D005029 ORTHO05D006052 4.3e-56 222.2 235 58.7
THA.LOC104814654 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 5.6e-56 221.9 251 55.0
Oeu044675.2 Olea europaea HOM05D005029 ORTHO05D006052 9.6e-56 221.1 282 51.4
Sc16g0010440 Simmondsia chinensis HOM05D005029 ORTHO05D006052 9.6e-56 221.1 254 54.3
MBI19_g21652_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 1.6e-55 220.3 249 51.4
Nn2g14879 Nelumbo nucifera HOM05D005029 ORTHO05D006052 2.8e-55 219.5 249 54.6
PSO170G2568 Papaver somniferum HOM05D005029 ORTHO05D006052 1.1e-54 217.6 258 52.7
SHI09006 Sapria himalayana HOM05D005029 ORTHO05D006052 1.1e-54 217.6 247 55.1
unitig_27.g24759 Utricularia gibba HOM05D005029 ORTHO05D006052 1.4e-54 217.2 252 51.6
Ciclev10009010m.g Citrus clementina HOM05D005029 ORTHO05D006052 2.4e-54 216.5 250 52.8
Atru.chr7.763 Acer truncatum HOM05D005029 ORTHO05D006052 4.0e-54 215.7 251 54.2
Atru.chr7.783 Acer truncatum HOM05D005029 ORTHO05D006052 4.0e-54 215.7 251 54.2
PSO063G5693 Papaver somniferum HOM05D005029 ORTHO05D006052 1.2e-53 214.2 258 52.3
unitig_699.g19404 Utricularia gibba HOM05D005029 ORTHO05D006052 4.5e-53 212.2 252 48.8
Lalb_Chr13g0300031 Lupinus albus HOM05D005029 ORTHO05D006052 1.3e-52 210.7 246 54.1
A08p19470 Brassica napus HOM05D005029 ORTHO05D006052 2.2e-52 209.9 239 56.9
ECA240G3783 Erigeron canadensis HOM05D005029 ORTHO05D006052 1.1e-51 207.6 237 56.5
Sed0026503 Sechium edule HOM05D005029 ORTHO05D006052 1.6e-50 203.8 255 50.2
BcaC09g51777 Brassica carinata HOM05D000106 ORTHO05D000160 2.7e-50 203.0 253 53.8
BraA01t00761Z Brassica rapa HOM05D005029 ORTHO05D006052 2.7e-50 203.0 255 53.3
CSS0012939 Camellia sinensis var. sinensis HOM05D005029 ORTHO05D006052 1.0e-49 201.1 258 51.2
BcaC09g51764 Brassica carinata HOM05D005029 ORTHO05D006052 1.8e-49 200.3 256 52.0
C03p88970 Brassica napus HOM05D005029 ORTHO05D006052 1.3e-47 194.1 249 51.8
MELO3C017433.2 Cucumis melo HOM05D005029 ORTHO05D006052 3.7e-47 192.6 257 48.2
A01p08140 Brassica napus HOM05D005029 ORTHO05D006052 4.8e-47 192.2 250 51.6
PGR142G1735 Punica granatum HOM05D005029 ORTHO05D006052 6.2e-47 191.8 212 55.7
C01p09110 Brassica napus HOM05D005029 ORTHO05D006052 8.2e-47 191.4 253 50.6
BolC1t00902H Brassica oleracea HOM05D005029 ORTHO05D006052 8.2e-47 191.4 253 50.6
ATR0626G110 Amborella trichopoda HOM05D005029 ORTHO05D006052 6.9e-46 188.3 253 45.8
CDE04G3679 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 6.9e-46 188.3 248 45.2
arahy.Tifrunner.gnm1.ann1.J7B49U Arachis hypogaea HOM05D005029 ORTHO05D006052 1.2e-45 187.6 195 57.4
BcaC07g37961 Brassica carinata HOM05D005029 ORTHO05D006052 1.5e-45 187.2 253 51.8
CDE02G0552 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 4.2e-43 179.1 245 44.5
Migut.J00802 Erythranthe guttata HOM05D005029 ORTHO05D006052 2.3e-41 173.3 251 45.8
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 5.7e-40 168.7 254 44.9
Os04g0606800 Oryza sativa ssp. japonica HOM05D005029 ORTHO05D006052 6.9e-38 161.8 248 42.7
Zm00001eb071460 Zea mays HOM05D005029 ORTHO05D006052 3.4e-37 159.5 254 43.3
HPP92_004703 Vanilla planifolia HOM05D005029 ORTHO05D006052 2.9e-36 156.4 239 44.8
C07p57380 Brassica napus HOM05D005029 ORTHO05D006052 5.0e-36 155.6 185 55.1
Lj5A672T26 Lonicera japonica HOM05D005029 ORTHO05D006052 8.5e-36 154.8 168 53.6
Zm00001eb430500 Zea mays HOM05D005029 ORTHO05D006052 2.5e-35 153.3 254 42.5
Rhsim01G0118000 Rhododendron simsii HOM05D005029 ORTHO05D006052 1.0e-33 147.9 233 42.5
SEGI_23735 Sequoiadendron giganteum HOM05D005029 ORTHO05D006052 3.0e-33 146.4 241 41.9
Duzib168G1982 Durio zibethinus HOM05D005029 ORTHO05D006052 3.3e-32 142.9 196 51.5
AagrBONN_evm.TU.Sc2ySwM_368.2110 Anthoceros agrestis HOM05D005029 ORTHO05D006052 2.2e-31 140.2 272 37.5
SMO358G0278 Selaginella moellendorffii HOM05D005029 ORTHO05D006052 3.1e-30 136.3 253 39.1
Mapoly0076s0086 Marchantia polymorpha HOM05D005029 ORTHO05D006052 5.9e-29 132.1 284 34.2
BcaB06g28011 Brassica carinata HOM05D005029 ORTHO05D006052 4.8e-23 112.5 92 64.1
Pp3c9_8340 Physcomitrium patens HOM05D005029 ORTHO05D006052 1.8e-22 110.5 274 32.1
A03p59350 Brassica napus HOM05D005029 ORTHO05D006052 3.2e-19 99.8 270 37.0
BcaC05g25672 Brassica carinata HOM05D005029 ORTHO05D006052 4.7e-18 95.9 169 43.8
BolC6t39910H Brassica oleracea HOM05D005029 ORTHO05D006052 4.1e-14 82.8 168 38.7
Lj5C672T2 Lonicera japonica HOM05D005029 ORTHO05D006052 7.0e-14 82.0 56 73.2
vmacro20818 Vaccinium macrocarpon HOM05D005029 ORTHO05D006052 9.1e-14 81.6 66 56.1
BcaB04g18770 Brassica carinata HOM05D005029 ORTHO05D006052 2.7e-10 70.1 71 56.3
Pp3c9_14880 Physcomitrium patens HOM05D005029 ORTHO05D006052 1.8e-09 67.4 119 37.0
CBR_g52634 Chara braunii HOM05D005029 ORTHO05D006052 2.8e-07 60.1 142 31.0
BcaB06g26390 Brassica carinata HOM05D005029 ORTHO05D006052 8.2e-07 58.5 71 46.5


User provided reference genes

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