Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034751.1 Olea europaea HOM05D005534 ORTHO05D006642 9.7e-217 756.5 379 100.0
Oeu034752.2 Olea europaea HOM05D005534 ORTHO05D006642 9.7e-217 756.5 379 100.0
MSTRG.6297 Avicennia marina HOM05D005534 ORTHO05D006642 4.7e-147 525.0 383 73.6
Nitab4.5_0006008g0020 Nicotiana tabacum HOM05D005534 ORTHO05D006642 9.2e-143 510.8 382 71.2
SalBow6G6434 Salvia bowleyana HOM05D005534 ORTHO05D006642 3.5e-142 508.8 400 68.0
PGSC0003DMG401019416 Solanum tuberosum HOM05D005534 ORTHO05D006642 1.0e-141 507.3 372 70.4
TAR381G0138 Trochodendron aralioides HOM05D005534 ORTHO05D006642 1.0e-141 507.3 384 69.3
Migut.J01545 Erythranthe guttata HOM05D005534 ORTHO05D006642 1.7e-141 506.5 359 74.1
Nitab4.5_0000731g0130 Nicotiana tabacum HOM05D005534 ORTHO05D006642 2.3e-141 506.1 380 71.3
Solyc10g012160.3 Solanum lycopersicum HOM05D005534 ORTHO05D006642 2.3e-141 506.1 372 70.7
Sopen10g005920 Solanum pennellii HOM05D005534 ORTHO05D006642 2.3e-141 506.1 372 70.4
Rhsim12G0004300 Rhododendron simsii HOM05D005534 ORTHO05D006642 1.2e-139 500.4 352 74.4
CAN.G911.34 Capsicum annuum HOM05D005534 ORTHO05D006642 6.2e-139 498.0 380 69.2
Cc00_g25290 Coffea canephora HOM05D005534 ORTHO05D006642 2.4e-138 496.1 363 71.3
Manes.18G119700 Manihot esculenta HOM05D005534 ORTHO05D006642 3.1e-138 495.7 370 71.1
Nn1g07947 Nelumbo nucifera HOM05D005534 ORTHO05D006642 1.5e-137 493.4 362 70.7
Duzib177G1161 Durio zibethinus HOM05D005534 ORTHO05D006642 5.8e-137 491.5 354 70.1
ECA234G3974 Erigeron canadensis HOM05D005534 ORTHO05D006642 2.2e-136 489.6 363 70.2
Sc19g0002770 Simmondsia chinensis HOM05D005534 ORTHO05D006642 3.8e-136 488.8 368 68.8
Duzib177G1179 Durio zibethinus HOM05D005534 ORTHO05D006642 1.1e-135 487.3 354 70.1
GSVIVG01036434001 Vitis vinifera HOM05D005534 ORTHO05D006642 1.1e-135 487.3 389 68.1
CSS0044704 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 1.9e-135 486.5 351 72.4
TWI18G0032 Tripterygium wilfordii HOM05D005534 ORTHO05D006642 4.2e-135 485.3 353 70.5
ClCG08G000650 Citrullus lanatus HOM05D005534 ORTHO05D006642 7.1e-135 484.6 359 70.2
Lsat_1_v5_gn_5_78481 Lactuca sativa HOM05D005534 ORTHO05D006642 7.1e-135 484.6 363 70.2
Actinidia23022 Actinidia chinensis HOM05D005534 ORTHO05D006642 1.2e-134 483.8 356 72.5
CsaV3_5G040210 Cucumis sativus L. HOM05D005534 ORTHO05D006642 1.6e-134 483.4 353 70.8
PGR044G1073 Punica granatum HOM05D005534 ORTHO05D006642 2.1e-134 483.0 386 66.3
Thecc.08G173200 Theobroma cacao HOM05D005534 ORTHO05D006642 2.7e-134 482.6 354 69.5
Gohir.D13G120700 Gossypium hirsutum HOM05D005534 ORTHO05D006642 3.5e-134 482.3 352 70.2
CiPaw.04G011000 Carya illinoinensis HOM05D005534 ORTHO05D006642 4.6e-134 481.9 379 68.1
Haze_13929 Corylus avellana HOM05D005534 ORTHO05D006642 6.0e-134 481.5 384 67.7
QL09p004039 Quercus lobata HOM05D005534 ORTHO05D006642 6.0e-134 481.5 352 69.3
AUR62026718 Chenopodium quinoa HOM05D005534 ORTHO05D006642 1.3e-133 480.3 386 64.8
Atru.chr13.2420 Acer truncatum HOM05D005534 ORTHO05D006642 1.7e-133 479.9 356 69.1
MD15G1399100 Malus domestica HOM05D005534 ORTHO05D006642 2.3e-133 479.6 368 66.8
Prupe.1G530500 Prunus persica HOM05D005534 ORTHO05D006642 2.3e-133 479.6 396 64.4
Hund26700 Selenicereus undatus HOM05D005534 ORTHO05D006642 1.5e-132 476.9 362 68.0
MD08G1215200 Malus domestica HOM05D005534 ORTHO05D006642 2.5e-132 476.1 367 66.5
Dinv18373 Davidia involucrata HOM05D005534 ORTHO05D006642 3.3e-132 475.7 415 63.1
Aqoxy2G03821 Aquilegia oxysepala HOM05D005534 ORTHO05D006642 1.3e-131 473.8 353 69.4
Ciclev10020832m.g Citrus clementina HOM05D005534 ORTHO05D006642 1.6e-131 473.4 362 66.9
RcHm_v2.0_Chr7g0231231 Rosa chinensis HOM05D005534 ORTHO05D006642 2.8e-131 472.6 363 67.2
Eucgr.F04073 Eucalyptus grandis HOM05D005534 ORTHO05D006642 3.6e-131 472.2 354 68.9
PSO017G6214 Papaver somniferum HOM05D005534 ORTHO05D006642 3.6e-131 472.2 365 68.5
FvH4_5g33060 Fragaria vesca HOM05D005534 ORTHO05D006642 8.1e-131 471.1 364 66.5
vmacro00924 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 8.1e-131 471.1 345 71.6
Potri.013G101700 Populus trichocarpa HOM05D005534 ORTHO05D006642 1.4e-130 470.3 369 67.2
Lj3g0019199 Lotus japonicus HOM05D005534 ORTHO05D006642 6.9e-130 468.0 375 66.1
Gorai.013G134900 Gossypium raimondii HOM05D005534 ORTHO05D006642 9.0e-130 467.6 379 65.2
MD04G1240000 Malus domestica HOM05D005534 ORTHO05D006642 1.5e-129 466.8 367 65.9
Medtr3g005730 Medicago truncatula HOM05D005534 ORTHO05D006642 1.5e-129 466.8 358 67.9
THA.LOC104800087 Tarenaya hassleriana HOM05D005534 ORTHO05D006642 3.4e-129 465.7 354 67.5
arahy.Tifrunner.gnm1.ann1.H1ATJ8 Arachis hypogaea HOM05D005534 ORTHO05D006642 7.6e-129 464.5 363 67.8
HPP92_005621 Vanilla planifolia HOM05D005534 ORTHO05D006642 9.9e-129 464.2 362 67.1
EL10Ac1g01529 Beta vulgaris HOM05D005534 ORTHO05D006642 3.8e-128 462.2 386 63.5
QL09p002970 Quercus lobata HOM05D005534 ORTHO05D006642 3.8e-128 462.2 337 69.4
CDE02G4760 Ceratophyllum demersum HOM05D005534 ORTHO05D006642 4.9e-128 461.8 389 64.0
MBI06_g06677_MAGBIO Magnolia biondii HOM05D005534 ORTHO05D006642 1.1e-127 460.7 346 69.1
Peaxi162Scf00065g00017 Petunia axillaris HOM05D005534 ORTHO05D006642 5.4e-127 458.4 364 65.7
COL.COLO4_05589 Corchorus olitorius HOM05D005534 ORTHO05D006642 1.6e-126 456.8 358 67.0
Glyma.04G257200 Glycine max HOM05D005534 ORTHO05D006642 2.7e-126 456.1 370 66.5
Sp1g20290 Schrenkiella parvula HOM05D005534 ORTHO05D006642 4.6e-126 455.3 352 67.0
VMungo1080G0932 Vigna mungo HOM05D005534 ORTHO05D006642 4.6e-126 455.3 382 63.6
AL1G36350 Arabidopsis lyrata HOM05D005534 ORTHO05D006642 7.9e-126 454.5 356 66.0
Glyma.12G242500 Glycine max HOM05D005534 ORTHO05D006642 7.9e-126 454.5 372 65.9
Carub.0001s2231 Capsella rubella HOM05D005534 ORTHO05D006642 1.0e-125 454.1 357 65.8
Lalb_Chr07g0177551 Lupinus albus HOM05D005534 ORTHO05D006642 1.0e-125 454.1 350 67.1
BcaNung06443 Brassica carinata HOM05D005534 ORTHO05D006642 6.7e-125 451.4 356 65.4
Thhalv10007396m.g Eutrema salsugineum HOM05D005534 ORTHO05D006642 6.7e-125 451.4 352 65.9
CARHR023160 Cardamine hirsuta HOM05D005534 ORTHO05D006642 1.5e-124 450.3 356 64.9
AT1G22800 Arabidopsis thaliana HOM05D005534 ORTHO05D006642 2.5e-124 449.5 356 65.2
Phvul.005G001600 Phaseolus vulgaris HOM05D005534 ORTHO05D006642 7.4e-124 448.0 364 64.3
Zm00001eb411080 Zea mays HOM05D005534 ORTHO05D006642 2.8e-123 446.0 351 66.1
TPR.G25542 Trifolium pratense HOM05D005534 ORTHO05D006642 8.1e-123 444.5 378 64.3
arahy.Tifrunner.gnm1.ann1.A8RPUL Arachis hypogaea HOM05D005534 ORTHO05D006642 6.9e-122 441.4 411 59.9
BcaNung06107 Brassica carinata HOM05D005534 ORTHO05D006642 1.2e-121 440.7 355 64.8
A09p41950 Brassica napus HOM05D005534 ORTHO05D006642 6.4e-120 434.9 368 62.8
MELO3C022197.2 Cucumis melo HOM05D005534 ORTHO05D006642 1.6e-115 420.2 370 61.6
BraA09t39683Z Brassica rapa HOM05D005534 ORTHO05D006642 2.1e-115 419.9 378 60.6
BolC5t30885H Brassica oleracea HOM05D005534 ORTHO05D006642 2.8e-115 419.5 357 62.5
DCAR_022334 Daucus carota HOM05D005534 ORTHO05D006642 3.1e-114 416.0 337 67.4
Gohir.A13G117400 Gossypium hirsutum HOM05D005534 ORTHO05D006642 9.0e-114 414.5 314 68.2
Psat1g000160 Pisum sativum HOM05D005534 ORTHO05D006642 3.4e-113 412.5 321 67.9
Aa31LG7G6790 Aethionema arabicum HOM05D005534 ORTHO05D006642 6.5e-112 408.3 380 58.9
PSO170G0367 Papaver somniferum HOM05D005534 ORTHO05D006642 2.1e-110 403.3 332 66.6
Ca_13980_v3 Cicer arietinum L. HOM05D005534 ORTHO05D006642 2.8e-107 392.9 316 66.1
AUR62013571 Chenopodium quinoa HOM05D005534 ORTHO05D006642 6.9e-106 388.3 323 62.5
SGA_v2.0_scaffold69G23189 Striga asiatica HOM05D005534 ORTHO05D006642 4.2e-103 379.0 319 66.5
Mapoly0125s0040 Marchantia polymorpha HOM05D005534 ORTHO05D006642 6.1e-102 375.2 350 57.7
Pp3c3_32560 Physcomitrium patens HOM05D005534 ORTHO05D006642 4.8e-99 365.5 347 56.5
HPP92_005624 Vanilla planifolia HOM05D005534 ORTHO05D006642 9.1e-98 361.3 283 67.8
Sabra13G0088100 Salix brachista HOM05D005534 ORTHO05D006642 1.2e-94 350.9 317 61.2
SMO232G0033 Selaginella moellendorffii HOM05D005534 ORTHO05D006642 4.7e-94 349.0 347 53.0
C05p21900 Brassica napus HOM05D005534 ORTHO05D006642 8.2e-91 338.2 287 62.0
Sed0013677 Sechium edule HOM05D005534 ORTHO05D006642 1.3e-88 330.9 265 66.4
unitig_899.g15650 Utricularia gibba HOM05D005534 ORTHO05D006642 1.2e-86 324.3 249 69.1
Lj1A290T42 Lonicera japonica HOM05D005534 ORTHO05D006642 6.1e-86 322.0 252 68.7
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 2.3e-85 320.1 380 48.2
ATR0681G326 Amborella trichopoda HOM05D005534 ORTHO05D006642 3.0e-85 319.7 262 61.5
Gohir.A13G117500 Gossypium hirsutum HOM05D005534 ORTHO05D006642 8.8e-85 318.2 313 58.1
SHI08987 Sapria himalayana HOM05D005534 ORTHO05D006642 7.4e-84 315.1 338 54.1
FAN18G2794 Fragaria x ananassa HOM05D005534 ORTHO05D006642 1.4e-82 310.8 307 55.4
Cpa.g.sc438.5 Carica papaya HOM05D005534 ORTHO05D006642 5.9e-81 305.4 367 49.3
vmacro22753 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 2.0e-76 290.4 358 50.3
HPP92_005612 Vanilla planifolia HOM05D005534 ORTHO05D006642 9.7e-76 288.1 247 64.4
Potri.013G101900 Populus trichocarpa HOM05D005534 ORTHO05D006642 4.5e-73 279.3 239 63.2
Cre13.g584750 Chlamydomonas reinhardtii HOM05D005534 ORTHO05D006642 3.6e-70 269.6 395 42.3
AagrBONN_evm.TU.Sc2ySwM_117.1319 Anthoceros agrestis HOM05D005534 ORTHO05D006642 1.7e-64 250.8 293 49.8
Lj1A297T60 Lonicera japonica HOM05D005534 ORTHO05D006642 9.2e-58 228.4 193 63.7
CANSAT25G1946 Cannabis sativa HOM05D005534 ORTHO05D006642 1.2e-54 218.0 163 68.1
Hma1.2p1_0708F.1_g207140 Hydrangea macrophylla HOM05D005534 ORTHO05D006642 3.7e-51 206.5 118 86.4
PRCOL_00005850 Prasinoderma coloniale HOM05D005534 ORTHO05D006642 4.9e-51 206.1 336 39.6
CANSAT25G1380 Cannabis sativa HOM05D005534 ORTHO05D006642 1.6e-49 201.1 177 59.9
TPR.G30718 Trifolium pratense HOM05D005534 ORTHO05D006642 6.0e-49 199.1 284 45.4
Hma1.2p1_0708F.1_g207130 Hydrangea macrophylla HOM05D005534 ORTHO05D006642 1.3e-48 198.0 121 81.8
Os12g0203100 Oryza sativa ssp. japonica HOM05D005534 ORTHO05D006642 3.4e-44 183.3 137 64.2
Zm00001eb320410 Zea mays HOM05D005534 ORTHO05D006642 7.5e-44 182.2 138 65.2
C07p20870 Brassica napus HOM05D005534 ORTHO05D006642 1.7e-43 181.0 134 70.9
BolC7t42620H Brassica oleracea HOM05D005534 ORTHO05D006642 1.7e-43 181.0 134 70.9
SEGI_21404 Sequoiadendron giganteum HOM05D005534 ORTHO05D006642 2.1e-41 174.1 121 69.4
BcaC06g34996 Brassica carinata HOM05D005534 ORTHO05D006642 4.6e-41 172.9 130 67.7
CSS0018807 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 1.7e-40 171.0 245 44.9
Cfa025826 Carpinus fangiana HOM05D005534 ORTHO05D006642 9.5e-39 165.2 381 31.5
CSS0033231 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 3.4e-36 156.8 209 47.8
Lj1A297G57 Lonicera japonica HOM05D005534 ORTHO05D006642 9.9e-36 155.2 91 83.5
A07p14190 Brassica napus HOM05D005534 ORTHO05D006642 2.8e-30 137.1 199 48.2
Glyma.04G256001 Glycine max HOM05D005534 ORTHO05D006642 1.1e-23 115.2 112 58.9
unitig_899.g15651 Utricularia gibba HOM05D005534 ORTHO05D006642 3.3e-23 113.6 82 67.1
FAN08G1090 Fragaria x ananassa HOM05D005534 ORTHO05D006642 1.6e-22 111.3 122 48.4
SEGI_02632 Sequoiadendron giganteum HOM05D005534 ORTHO05D006642 1.7e-19 101.3 72 63.9
CAN.G1062.3 Capsicum annuum HOM05D005534 ORTHO05D006642 1.0e-16 92.0 151 41.7
HanXRQChr11g0339001 Helianthus annuus HOM05D005534 ORTHO05D006642 6.6e-16 89.4 55 80.0
Lj1E297T0 Lonicera japonica HOM05D005534 ORTHO05D006642 4.8e-14 83.2 73 64.4
Lj1A290G37 Lonicera japonica HOM05D005534 ORTHO05D006642 8.1e-14 82.4 85 57.6
MCO12G480 Micromonas commoda HOM05D005534 ORTHO05D006642 1.1e-13 82.0 113 41.6
Lsat_1_v5_gn_2_74121 Lactuca sativa HOM05D000236 ORTHO05D000192 1.4e-13 81.6 59 71.2
A07p14200 Brassica napus HOM05D002040 ORTHO05D006642 3.1e-13 80.5 81 50.6
TPR.G30727 Trifolium pratense HOM05D005534 ORTHO05D006642 1.2e-09 68.6 62 59.7
HPP92_005611 Vanilla planifolia HOM05D000010 ORTHO05D429468 3.5e-09 67.0 57 56.1
Lj1A290T43 Lonicera japonica HOM05D005534 ORTHO05D006642 7.9e-09 65.9 38 73.7
BraA07t29177Z Brassica rapa HOM05D005534 ORTHO05D006642 5.1e-08 63.2 35 80.0
Lsat_1_v5_gn_4_32401 Lactuca sativa HOM05D000240 ORTHO05D001153 3.3e-07 60.5 39 79.5


User provided reference genes

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