Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034749.1 Olea europaea HOM05D004369 ORTHO05D004907 2.4e-122 442.2 224 100.0
Oeu034750.1 Olea europaea HOM05D004369 ORTHO05D004907 4.8e-115 417.9 226 95.1
Oeu060762.1 Olea europaea HOM05D004369 ORTHO05D004907 8.0e-78 294.3 234 68.4
MSTRG.6296 Avicennia marina HOM05D004369 ORTHO05D004907 4.9e-43 178.7 224 48.7
MSTRG.19768 Avicennia marina HOM05D004369 ORTHO05D004907 1.4e-42 177.2 227 48.9
Oeu009515.1 Olea europaea HOM05D004369 ORTHO05D004907 1.6e-41 173.7 233 51.1
Oeu023004.1 Olea europaea HOM05D004369 ORTHO05D004907 6.0e-41 171.8 237 49.4
Migut.J01607 Erythranthe guttata HOM05D004369 ORTHO05D004907 2.3e-40 169.9 231 49.4
Oeu057811.1 Olea europaea HOM05D004369 ORTHO05D004907 1.3e-38 164.1 228 49.6
Oeu044231.1 Olea europaea HOM05D004369 ORTHO05D004907 1.1e-37 161.0 229 47.6
SalBow6G6868 Salvia bowleyana HOM05D004369 ORTHO05D004907 9.0e-37 157.9 220 48.2
Cc00_g08990 Coffea canephora HOM05D004369 ORTHO05D004907 2.0e-36 156.8 245 46.9
Nn7g37071 Nelumbo nucifera HOM05D004369 ORTHO05D004907 4.9e-35 152.1 231 46.8
TWI74G0038 Tripterygium wilfordii HOM05D004369 ORTHO05D004907 1.1e-34 151.0 249 43.8
Cpa.g.sc33.191 Carica papaya HOM05D004369 ORTHO05D004907 3.2e-34 149.4 239 46.9
Manes.08G065900 Manihot esculenta HOM05D004369 ORTHO05D004907 1.2e-33 147.5 242 44.6
CiPaw.09G052400 Carya illinoinensis HOM05D004369 ORTHO05D004907 2.1e-33 146.7 239 45.6
Solyc10g077130.1 Solanum lycopersicum HOM05D004369 ORTHO05D004907 2.7e-33 146.4 227 47.1
Nitab4.5_0000123g0220 Nicotiana tabacum HOM05D004369 ORTHO05D004907 4.6e-33 145.6 240 44.6
Glyma.03G120700 Glycine max HOM05D004369 ORTHO05D004907 6.0e-33 145.2 246 44.7
CSS0041918 Camellia sinensis var. sinensis HOM05D004369 ORTHO05D004907 7.9e-33 144.8 229 47.6
Peaxi162Scf00607g00054 Petunia axillaris HOM05D004369 ORTHO05D004907 1.3e-32 144.1 237 45.6
Cfa019946 Carpinus fangiana HOM05D004369 ORTHO05D004907 1.8e-32 143.7 243 44.4
Sopen10g028810 Solanum pennellii HOM05D004369 ORTHO05D004907 1.8e-32 143.7 227 47.1
PGSC0003DMG400007200 Solanum tuberosum HOM05D004369 ORTHO05D004907 1.8e-32 143.7 231 46.3
VMungo1383G1978 Vigna mungo HOM05D004369 ORTHO05D004907 1.8e-32 143.7 251 43.4
Migut.K00167 Erythranthe guttata HOM05D004369 ORTHO05D004907 2.3e-32 143.3 235 44.3
TWI53G1196 Tripterygium wilfordii HOM05D004369 ORTHO05D004907 2.3e-32 143.3 245 43.7
Dinv06038 Davidia involucrata HOM05D004369 ORTHO05D004907 3.0e-32 142.9 233 47.2
Haze_20292 Corylus avellana HOM05D004369 ORTHO05D004907 3.9e-32 142.5 242 43.8
SGA_v2.0_scaffold66G22309 Striga asiatica HOM05D004369 ORTHO05D004907 3.9e-32 142.5 239 41.8
TAR623G1559 Trochodendron aralioides HOM05D004369 ORTHO05D004907 3.9e-32 142.5 234 47.0
Nitab4.5_0001270g0170 Nicotiana tabacum HOM05D004369 ORTHO05D004907 5.1e-32 142.1 240 44.6
MSTRG.26187 Avicennia marina HOM05D004369 ORTHO05D004907 6.7e-32 141.7 233 48.5
Nitab4.5_0000062g0280 Nicotiana tabacum HOM05D004369 ORTHO05D004907 6.7e-32 141.7 233 45.9
Ciclev10012618m.g Citrus clementina HOM05D004369 ORTHO05D004907 1.1e-31 141.0 244 43.0
Prupe.6G310500 Prunus persica HOM05D004369 ORTHO05D004907 1.9e-31 140.2 263 41.8
Phvul.001G116900 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 2.5e-31 139.8 251 42.6
Potri.016G029600 Populus trichocarpa HOM05D004369 ORTHO05D004907 2.5e-31 139.8 262 42.4
MD04G1191900 Malus domestica HOM05D004369 ORTHO05D004907 3.3e-31 139.4 266 41.7
RhsimUnG0020900 Rhododendron simsii HOM05D004369 ORTHO05D004907 4.3e-31 139.0 245 45.7
Sabra16G0033500 Salix brachista HOM05D004369 ORTHO05D004907 4.3e-31 139.0 259 43.2
Duzib106G1975 Durio zibethinus HOM05D004369 ORTHO05D004907 9.6e-31 137.9 239 45.2
MSTRG.10776 Avicennia marina HOM05D004369 ORTHO05D004907 2.4e-29 133.3 226 42.9
Atru.chr1.1512 Acer truncatum HOM05D004369 ORTHO05D004907 3.1e-29 132.9 245 43.3
DCAR_013523 Daucus carota HOM05D004369 ORTHO05D004907 4.0e-29 132.5 227 43.6
Sabra06G0021600 Salix brachista HOM05D004369 ORTHO05D004907 5.3e-29 132.1 264 40.5
PGR042G0777 Punica granatum HOM05D004369 ORTHO05D004907 6.9e-29 131.7 235 43.0
ClCG10G016480 Citrullus lanatus HOM05D004369 ORTHO05D004907 9.0e-29 131.3 247 43.7
PGSC0003DMG400028198 Solanum tuberosum HOM05D004369 ORTHO05D004907 9.0e-29 131.3 235 43.4
Lsat_1_v5_gn_8_109221 Lactuca sativa HOM05D004369 ORTHO05D004907 1.5e-28 130.6 248 40.7
Phvul.002G069001 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 2.6e-28 129.8 234 42.7
Manes.09G001100 Manihot esculenta HOM05D004369 ORTHO05D004907 4.5e-28 129.0 241 40.7
MBI13_g13129_MAGBIO Magnolia biondii HOM05D004369 ORTHO05D004907 5.8e-28 128.6 236 42.4
PGR142G3989 Punica granatum HOM05D004369 ORTHO05D004907 5.8e-28 128.6 270 41.1
CsaV3_3G039860 Cucumis sativus L. HOM05D004369 ORTHO05D004907 7.6e-28 128.3 258 41.5
Medtr7g088620 Medicago truncatula HOM05D004369 ORTHO05D004907 7.6e-28 128.3 253 40.3
Lj1g0025044 Lotus japonicus HOM05D004369 ORTHO05D004907 2.2e-27 126.7 239 44.4
QL07p014155 Quercus lobata HOM05D004369 ORTHO05D004907 2.9e-27 126.3 256 40.2
SGA_v2.0_scaffold69G23192 Striga asiatica HOM05D004369 ORTHO05D004907 3.8e-27 125.9 241 38.6
Glyma.19G125300 Glycine max HOM05D004369 ORTHO05D004907 4.9e-27 125.6 246 40.7
MELO3C009728.2 Cucumis melo HOM05D004369 ORTHO05D004907 6.5e-27 125.2 256 41.8
Potri.006G032300 Populus trichocarpa HOM05D004369 ORTHO05D004907 6.5e-27 125.2 267 40.4
EL10Ac3g07333 Beta vulgaris HOM05D004369 ORTHO05D004907 8.4e-27 124.8 242 40.9
Lalb_Chr14g0365411 Lupinus albus HOM05D004369 ORTHO05D004907 3.2e-26 122.9 254 40.9
Psat0ss9348g0120 Pisum sativum HOM05D004369 ORTHO05D004907 4.2e-26 122.5 259 40.9
Sopen10g031550 Solanum pennellii HOM05D004369 ORTHO05D004907 4.2e-26 122.5 235 40.9
Actinidia37863 Actinidia chinensis HOM05D004369 ORTHO05D004907 5.5e-26 122.1 241 43.6
CANSAT80G1482 Cannabis sativa HOM05D004369 ORTHO05D004907 7.1e-26 121.7 213 41.3
AUR62018430 Chenopodium quinoa HOM05D004369 ORTHO05D004907 9.3e-26 121.3 244 41.4
Lalb_Chr22g0357981 Lupinus albus HOM05D004369 ORTHO05D004907 2.1e-25 120.2 251 41.4
SalBow1G6186 Salvia bowleyana HOM05D004369 ORTHO05D004907 2.1e-25 120.2 234 38.9
Thecc.05G119700 Theobroma cacao HOM05D004369 ORTHO05D004907 3.5e-25 119.4 257 39.7
FAN02G1899 Fragaria x ananassa HOM05D002683 ORTHO05D007757 6.0e-25 118.6 265 39.2
Ah.04g150390 Amaranthus hybridus HOM05D004369 ORTHO05D004907 1.0e-24 117.9 237 39.7
FAN14G1324 Fragaria x ananassa HOM05D002683 ORTHO05D007757 1.3e-24 117.5 262 39.3
CiPaw.10G044100 Carya illinoinensis HOM05D004369 ORTHO05D004907 1.8e-24 117.1 217 42.4
Duzib128G0931 Durio zibethinus HOM05D004369 ORTHO05D004907 2.3e-24 116.7 237 41.4
Ca_08356_v3 Cicer arietinum L. HOM05D004369 ORTHO05D004907 3.0e-24 116.3 254 40.9
FvH4_6g07790 Fragaria vesca HOM05D004369 ORTHO05D004907 3.0e-24 116.3 262 38.5
AUR62021003 Chenopodium quinoa HOM05D004369 ORTHO05D004907 3.9e-24 115.9 242 39.3
RcHm_v2.0_Chr3g0457501 Rosa chinensis HOM05D004369 ORTHO05D004907 8.7e-24 114.8 185 45.4
CiPaw.12G092400 Carya illinoinensis HOM05D004369 ORTHO05D004907 1.1e-23 114.4 178 47.8
Gorai.007G351100 Gossypium raimondii HOM05D004369 ORTHO05D004907 1.9e-23 113.6 226 40.7
BcaC07g40111 Brassica carinata HOM05D004369 ORTHO05D004907 3.3e-23 112.8 244 41.0
FAN09G2868 Fragaria x ananassa HOM05D004369 ORTHO05D004907 3.3e-23 112.8 261 37.2
Gohir.D11G320900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 3.3e-23 112.8 226 40.7
Peaxi162Scf00003g05315 Petunia axillaris HOM05D004369 ORTHO05D004907 3.3e-23 112.8 231 39.8
Ah.13g077330 Amaranthus hybridus HOM05D004369 ORTHO05D004907 4.3e-23 112.5 228 40.4
Aqoxy2G00033 Aquilegia oxysepala HOM05D004369 ORTHO05D004907 1.3e-22 110.9 266 36.8
A09p49750 Brassica napus HOM05D004369 ORTHO05D004907 1.3e-22 110.9 244 37.7
BraA09t40428Z Brassica rapa HOM05D004369 ORTHO05D004907 1.3e-22 110.9 244 37.7
Gohir.A11G305500 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.3e-22 110.9 226 40.3
BolC8t50831H Brassica oleracea HOM05D004369 ORTHO05D004907 2.8e-22 109.8 244 37.3
Eucgr.K01686 Eucalyptus grandis HOM05D004369 ORTHO05D004907 2.8e-22 109.8 282 33.7
Gohir.D01G183200 Gossypium hirsutum HOM05D004369 ORTHO05D004907 4.8e-22 109.0 233 41.6
Sc19g0007900 Simmondsia chinensis HOM05D004369 ORTHO05D004907 4.8e-22 109.0 233 40.8
BcaC07g40000 Brassica carinata HOM05D004369 ORTHO05D004907 8.2e-22 108.2 244 36.9
C08p32120 Brassica napus HOM05D004369 ORTHO05D004907 8.2e-22 108.2 244 36.9
Gorai.002G226300 Gossypium raimondii HOM05D004369 ORTHO05D004907 1.4e-21 107.5 233 41.6
HanXRQChr09g0258571 Helianthus annuus HOM05D004369 ORTHO05D004907 4.1e-21 105.9 221 39.8
BcaB02g08344 Brassica carinata HOM05D004369 ORTHO05D004907 1.5e-20 104.0 245 36.3
Gohir.A01G192900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 2.6e-20 103.2 234 40.6
CDE09G1065 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 4.5e-20 102.4 210 41.0
Sp5g05710 Schrenkiella parvula HOM05D004369 ORTHO05D004907 4.5e-20 102.4 259 34.7
THA.LOC104824387 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 4.5e-20 102.4 251 38.2
TPR.G22743 Trifolium pratense HOM05D004369 ORTHO05D004907 1.0e-19 101.3 172 44.8
AL5G38270 Arabidopsis lyrata HOM05D004369 ORTHO05D004907 1.3e-19 100.9 255 35.7
AT3G56880 Arabidopsis thaliana HOM05D004369 ORTHO05D004907 2.2e-19 100.1 251 34.3
SGA_v2.0_scaffold106G30551 Striga asiatica HOM05D004369 ORTHO05D004907 2.9e-19 99.8 229 38.0
A04p03590 Brassica napus HOM05D004369 ORTHO05D004907 6.5e-19 98.6 248 36.3
BraA04t16076Z Brassica rapa HOM05D004369 ORTHO05D004907 1.1e-18 97.8 248 36.3
THA.LOC104803243 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 2.5e-18 96.7 257 36.6
BcaC02g09876 Brassica carinata HOM05D004369 ORTHO05D004907 3.2e-18 96.3 243 35.8
C04p35650 Brassica napus HOM05D004369 ORTHO05D004907 3.2e-18 96.3 243 35.8
BolC4t25239H Brassica oleracea HOM05D004369 ORTHO05D004907 3.2e-18 96.3 243 35.8
Carub.0005s2361 Capsella rubella HOM05D004369 ORTHO05D004907 4.2e-18 95.9 259 32.8
CAN.G959.22 Capsicum annuum HOM05D004369 ORTHO05D004907 5.5e-18 95.5 146 45.2
HanXRQChr03g0086901 Helianthus annuus HOM05D004369 ORTHO05D004907 1.2e-17 94.4 235 37.9
Thhalv10006505m.g Eutrema salsugineum HOM05D004369 ORTHO05D004907 1.6e-17 94.0 248 34.7
DCAR_020610 Daucus carota HOM05D004369 ORTHO05D004907 2.1e-17 93.6 154 48.1
HPP92_012446 Vanilla planifolia HOM05D004369 ORTHO05D004907 4.6e-17 92.4 209 37.3
Aa31LG10G11730 Aethionema arabicum HOM05D004369 ORTHO05D004907 1.0e-16 91.3 170 39.4
BraA04t18590Z Brassica rapa HOM05D004369 ORTHO05D004907 1.0e-16 91.3 248 34.7
CARHR167030 Cardamine hirsuta HOM05D004369 ORTHO05D004907 1.3e-16 90.9 267 34.5
Gohir.A11G305600 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.3e-16 90.9 225 35.1
A04p31330 Brassica napus HOM05D004369 ORTHO05D004907 1.8e-16 90.5 246 35.4
Gorai.007G351200 Gossypium raimondii HOM05D004369 ORTHO05D004907 1.8e-16 90.5 226 35.4
Sc25g0005580 Simmondsia chinensis HOM05D004369 ORTHO05D004907 2.3e-16 90.1 129 51.9
CARHR136130 Cardamine hirsuta HOM05D004369 ORTHO05D004907 3.0e-16 89.7 247 32.8
Gohir.D11G321000 Gossypium hirsutum HOM05D004369 ORTHO05D004907 6.7e-16 88.6 226 35.0
THA.LOC104815333 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 8.7e-16 88.2 245 35.5
AT2G41010 Arabidopsis thaliana HOM05D004369 ORTHO05D004907 1.5e-15 87.4 217 36.9
BcaC02g12874 Brassica carinata HOM05D004369 ORTHO05D004907 1.5e-15 87.4 242 33.5
C04p68730 Brassica napus HOM05D004369 ORTHO05D004907 1.9e-15 87.0 238 34.5
BolC4t28378H Brassica oleracea HOM05D004369 ORTHO05D004907 1.9e-15 87.0 238 34.5
Sed0018866 Sechium edule HOM05D004369 ORTHO05D004907 1.9e-15 87.0 235 37.9
unitig_21.g20674 Utricularia gibba HOM05D004369 ORTHO05D004907 2.5e-15 86.7 250 34.0
PSO384G0208 Papaver somniferum HOM05D004369 ORTHO05D004907 3.3e-15 86.3 179 39.7
ECA236G2438 Erigeron canadensis HOM05D004369 ORTHO05D004907 4.3e-15 85.9 123 48.0
Thhalv10017173m.g Eutrema salsugineum HOM05D004369 ORTHO05D004907 5.7e-15 85.5 256 34.0
PSO339G3328 Papaver somniferum HOM05D004369 ORTHO05D004907 5.7e-15 85.5 179 39.7
Sp4g23330 Schrenkiella parvula HOM05D004369 ORTHO05D004907 7.4e-15 85.1 259 34.4
HPP92_014347 Vanilla planifolia HOM05D004369 ORTHO05D004907 9.7e-15 84.7 186 41.4
Eucgr.A02182 Eucalyptus grandis HOM05D004369 ORTHO05D004907 3.7e-14 82.8 251 33.5
Lalb_Chr24g0400611 Lupinus albus HOM05D004369 ORTHO05D004907 1.2e-12 77.8 189 39.7
AL4G38990 Arabidopsis lyrata HOM05D004369 ORTHO05D004907 1.5e-12 77.4 144 41.0
ATR1096G063 Amborella trichopoda HOM05D004369 ORTHO05D004907 1.3e-11 74.3 230 33.9
Carub.0004s2334 Capsella rubella HOM05D004369 ORTHO05D004907 2.2e-11 73.6 187 36.4
CDE08G1070 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 4.6e-09 65.9 145 41.4
CDE04G0994 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 6.1e-09 65.5 205 35.1
CAN.G128.96 Capsicum annuum HOM05D004369 ORTHO05D004907 7.9e-09 65.1 121 41.3
HPP92_028709 Vanilla planifolia HOM05D004369 ORTHO05D004907 1.0e-08 64.7 131 39.7
CDE02G4522 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 2.3e-08 63.5 180 33.9
Os01g0278000 Oryza sativa ssp. japonica HOM05D004369 ORTHO05D004907 1.5e-07 60.8 80 46.2
Zm00001eb128970 Zea mays HOM05D004369 ORTHO05D004907 4.4e-07 59.3 167 35.3
Os11g0131100 Oryza sativa ssp. japonica HOM05D004369 ORTHO05D004907 6.3e-06 55.5 137 34.3


User provided reference genes

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