Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034566.1 Olea europaea HOM05D000323 ORTHO05D000201 6.6e-21 103.2 56 100.0
Nn6g35039 Nelumbo nucifera HOM05D000323 ORTHO05D000201 5.2e-10 67.0 42 76.2
Peaxi162Scf00002g05210 Petunia axillaris HOM05D000323 ORTHO05D000201 5.2e-10 67.0 42 73.8
Hma1.2p1_0695F.1_g204390 Hydrangea macrophylla HOM05D000323 ORTHO05D000201 8.9e-10 66.2 42 73.8
Nitab4.5_0004296g0040 Nicotiana tabacum HOM05D000323 ORTHO05D000201 8.9e-10 66.2 42 73.8
Actinidia24181 Actinidia chinensis HOM05D000323 ORTHO05D000201 1.2e-09 65.9 42 78.6
Nn2g14009 Nelumbo nucifera HOM05D000323 ORTHO05D000201 1.2e-09 65.9 42 73.8
Actinidia07208 Actinidia chinensis HOM05D000323 ORTHO05D000201 1.5e-09 65.5 42 76.2
CAN.G644.28 Capsicum annuum HOM05D000323 ORTHO05D000201 1.5e-09 65.5 42 71.4
Solyc11g066900.2 Solanum lycopersicum HOM05D000323 ORTHO05D000201 1.5e-09 65.5 42 71.4
Sopen11g026610 Solanum pennellii HOM05D000323 ORTHO05D000201 1.5e-09 65.5 42 71.4
PGSC0003DMG400026537 Solanum tuberosum HOM05D000323 ORTHO05D000201 1.5e-09 65.5 42 71.4
vmacro03279 Vaccinium macrocarpon HOM05D000323 ORTHO05D000201 1.5e-09 65.5 42 76.2
CiPaw.14G103300 Carya illinoinensis HOM05D000323 ORTHO05D000201 2.0e-09 65.1 42 73.8
Dinv29427 Davidia involucrata HOM05D000323 ORTHO05D000201 2.0e-09 65.1 42 73.8
Duzib168G1847 Durio zibethinus HOM05D000323 ORTHO05D000201 2.0e-09 65.1 42 73.8
SalBow6G0634 Salvia bowleyana HOM05D000323 ORTHO05D000201 2.0e-09 65.1 42 73.8
MSTRG.21059 Avicennia marina HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 71.4
AUR62023930 Chenopodium quinoa HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 76.2
AUR62038310 Chenopodium quinoa HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 76.2
COL.COLO4_03353 Corchorus olitorius HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 71.4
Dinv12519 Davidia involucrata HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 71.4
Duzib170G0175 Durio zibethinus HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 71.4
Gohir.A07G107500 Gossypium hirsutum HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 71.4
Gohir.D07G111500 Gossypium hirsutum HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 71.4
Gorai.001G119800 Gossypium raimondii HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 71.4
Rhsim13G0105300 Rhododendron simsii HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 73.8
Thecc.09G291100 Theobroma cacao HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 71.4
TWI31G0620 Tripterygium wilfordii HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 71.4
TWI79G0349 Tripterygium wilfordii HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 71.4
HPP92_006798 Vanilla planifolia HOM05D000323 ORTHO05D000201 2.6e-09 64.7 42 76.2
ClCG01G012680 Citrullus lanatus HOM05D000323 ORTHO05D000201 3.4e-09 64.3 42 73.8
MELO3C004794.2 Cucumis melo HOM05D000323 ORTHO05D000201 3.4e-09 64.3 42 73.8
CsaV3_1G014520 Cucumis sativus L. HOM05D000323 ORTHO05D000201 3.4e-09 64.3 42 73.8
MD03G1135100 Malus domestica HOM05D000323 ORTHO05D000201 3.4e-09 64.3 42 71.4
Manes.04G008200 Manihot esculenta HOM05D000323 ORTHO05D000201 3.4e-09 64.3 42 71.4
QL01p013634 Quercus lobata HOM05D000323 ORTHO05D000201 3.4e-09 64.3 42 71.4
Hund00772 Selenicereus undatus HOM05D000323 ORTHO05D000201 3.4e-09 64.3 42 73.8
Hund07681 Selenicereus undatus HOM05D000323 ORTHO05D000201 3.4e-09 64.3 42 76.2
CANSAT54G1573 Cannabis sativa HOM05D000323 ORTHO05D000201 5.8e-09 63.5 42 71.4
Sc12g0004190 Simmondsia chinensis HOM05D000323 ORTHO05D000201 5.8e-09 63.5 42 69.0
SGA_v2.0_scaffold27G11619 Striga asiatica HOM05D000323 ORTHO05D000201 5.8e-09 63.5 42 69.0
Atru.chr3.3370 Acer truncatum HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 66.7
arahy.Tifrunner.gnm1.ann1.ETY13H Arachis hypogaea HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 69.0
arahy.Tifrunner.gnm1.ann1.N6J268 Arachis hypogaea HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 69.0
arahy.Tifrunner.gnm1.ann1.Y4C5ZF Arachis hypogaea HOM05D000323 ORTHO05D000201 7.5e-09 63.2 41 70.7
CiPaw.13G140800 Carya illinoinensis HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 69.0
DCAR_010395 Daucus carota HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 69.0
FvH4_3g24260 Fragaria vesca HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 69.0
FAN11G0741 Fragaria x ananassa HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 69.0
FAN21G1737 Fragaria x ananassa HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 69.0
Potri.004G187900 Populus trichocarpa HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 73.8
Potri.009G148600 Populus trichocarpa HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 73.8
Prupe.6G119500 Prunus persica HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 69.0
Sabra04G0126800 Salix brachista HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 73.8
Sabra09G0117100 Salix brachista HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 73.8
TAR369G1118 Trochodendron aralioides HOM05D000323 ORTHO05D000201 7.5e-09 63.2 42 71.4
EL10Ac9g21087 Beta vulgaris HOM05D000323 ORTHO05D000201 9.8e-09 62.8 42 71.4
FAN16G1069 Fragaria x ananassa HOM05D000323 ORTHO05D000201 9.8e-09 62.8 42 69.0
Lj1C222G10 Lonicera japonica HOM05D000323 ORTHO05D000201 9.8e-09 62.8 42 71.4
Lalb_Chr03g0027921 Lupinus albus HOM05D000323 ORTHO05D000201 9.8e-09 62.8 42 71.4
PSO063G6254 Papaver somniferum HOM05D000323 ORTHO05D000201 9.8e-09 62.8 39 76.9
PSO339G4663 Papaver somniferum HOM05D000323 ORTHO05D000201 9.8e-09 62.8 39 76.9
RcHm_v2.0_Chr5g0043401 Rosa chinensis HOM05D000323 ORTHO05D000201 9.8e-09 62.8 42 69.0
Aa31LG5G8200 Aethionema arabicum HOM05D000323 ORTHO05D000201 1.7e-08 62.0 42 66.7
Aqoxy1G00934 Aquilegia oxysepala HOM05D000323 ORTHO05D000201 1.7e-08 62.0 39 74.4
CDE08G1120 Ceratophyllum demersum HOM05D000323 ORTHO05D000201 1.7e-08 62.0 42 71.4
ATR0820G281 Amborella trichopoda HOM05D000323 ORTHO05D000201 2.2e-08 61.6 42 66.7
FAN25G0895 Fragaria x ananassa HOM05D000323 ORTHO05D000201 2.2e-08 61.6 42 69.0
FAN25G3106 Fragaria x ananassa HOM05D000323 ORTHO05D000201 2.2e-08 61.6 42 69.0
Lsat_1_v5_gn_2_95521 Lactuca sativa HOM05D000323 ORTHO05D000201 2.2e-08 61.6 39 74.4
GSVIVG01031396001 Vitis vinifera HOM05D000323 ORTHO05D000201 2.2e-08 61.6 42 69.0
Actinidia37096 Actinidia chinensis HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 69.0
BcaB06g28171 Brassica carinata HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 66.7
BcaC02g08228 Brassica carinata HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 66.7
A04p21150 Brassica napus HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 66.7
C04p56960 Brassica napus HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 66.7
BolC4t27233H Brassica oleracea HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 66.7
BraA04t17684Z Brassica rapa HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 66.7
CARHR120510 Cardamine hirsuta HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 64.3
Ca_01676_v3 Cicer arietinum L. HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 66.7
Ca_19374_v3 Cicer arietinum L. HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 69.0
Glyma.12G085600 Glycine max HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 69.0
Lalb_Chr14g0374191 Lupinus albus HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 66.7
Medtr2g084895 Medicago truncatula HOM05D000323 ORTHO05D000201 2.9e-08 61.2 42 69.0
C04p23770 Brassica napus HOM05D000323 ORTHO05D000201 3.7e-08 60.8 42 64.3
Glyma.12G181900 Glycine max HOM05D000323 ORTHO05D000201 3.7e-08 60.8 42 66.7
Lj3g0008838 Lotus japonicus HOM05D000323 ORTHO05D000201 3.7e-08 60.8 42 66.7
Lj3g0011449 Lotus japonicus HOM05D000323 ORTHO05D000201 3.7e-08 60.8 42 66.7
MD11G1157800 Malus domestica HOM05D000323 ORTHO05D000201 3.7e-08 60.8 42 69.0
Phvul.011G090500 Phaseolus vulgaris HOM05D000323 ORTHO05D000201 3.7e-08 60.8 42 66.7
TAR623G0469 Trochodendron aralioides HOM05D000323 ORTHO05D000201 3.7e-08 60.8 42 69.0
VMungo1127G2296 Vigna mungo HOM05D000323 ORTHO05D000201 3.7e-08 60.8 42 66.7
BcaC02g10909 Brassica carinata HOM05D000323 ORTHO05D000201 4.9e-08 60.5 42 64.3
CDE02G2702 Ceratophyllum demersum HOM05D000323 ORTHO05D000201 4.9e-08 60.5 42 69.0
Glyma.13G318900 Glycine max HOM05D000323 ORTHO05D000201 4.9e-08 60.5 42 64.3
Phvul.005G127000 Phaseolus vulgaris HOM05D000323 ORTHO05D000201 4.9e-08 60.5 42 64.3
PGR119G0240 Punica granatum HOM05D000323 ORTHO05D000201 4.9e-08 60.5 42 64.3
VMungo1080G1197 Vigna mungo HOM05D000323 ORTHO05D000201 4.9e-08 60.5 42 66.7
CSS0006212 Camellia sinensis var. sinensis HOM05D000323 ORTHO05D000201 6.4e-08 60.1 42 69.0
CSS0011021 Camellia sinensis var. sinensis HOM05D000323 ORTHO05D000201 6.4e-08 60.1 42 69.0
Cpa.g.sc47.67 Carica papaya HOM05D000323 ORTHO05D000201 6.4e-08 60.1 42 66.7
Thhalv10016327m.g Eutrema salsugineum HOM05D000323 ORTHO05D000201 8.3e-08 59.7 42 64.3
A07p18410 Brassica napus HOM05D000323 ORTHO05D000201 1.1e-07 59.3 42 61.9
BraA07t29557Z Brassica rapa HOM05D000323 ORTHO05D000201 1.1e-07 59.3 42 61.9
Cc01_g09770 Coffea canephora HOM05D000323 ORTHO05D000201 1.1e-07 59.3 42 69.0
ECA238G4318 Erigeron canadensis HOM05D000323 ORTHO05D000201 1.1e-07 59.3 39 71.8
Eucgr.J00429 Eucalyptus grandis HOM05D000323 ORTHO05D000201 1.1e-07 59.3 42 71.4
AT2G27810 Arabidopsis thaliana HOM05D000323 ORTHO05D000201 1.4e-07 58.9 42 61.9
Carub.0004s0857 Capsella rubella HOM05D000323 ORTHO05D000201 1.4e-07 58.9 42 61.9
Migut.D02338 Erythranthe guttata HOM05D000323 ORTHO05D000201 1.4e-07 58.9 42 66.7
AL4G22470 Arabidopsis lyrata HOM05D000323 ORTHO05D000201 1.9e-07 58.5 42 61.9
arahy.Tifrunner.gnm1.ann1.EPCZ74 Arachis hypogaea HOM05D000323 ORTHO05D000201 1.9e-07 58.5 42 64.3
Glyma.11G189000 Glycine max HOM05D000323 ORTHO05D000201 1.9e-07 58.5 42 64.3
Sp4g10650 Schrenkiella parvula HOM05D000323 ORTHO05D000201 1.9e-07 58.5 42 61.9
Cfa010079 Carpinus fangiana HOM05D000323 ORTHO05D000201 2.4e-07 58.2 42 64.3
Lsat_1_v5_gn_6_41321 Lactuca sativa HOM05D000323 ORTHO05D000201 2.4e-07 58.2 39 71.8
SMO201G0183 Selaginella moellendorffii HOM05D000323 ORTHO05D000201 2.4e-07 58.2 42 64.3
Haze_23445 Corylus avellana HOM05D000323 ORTHO05D000201 3.2e-07 57.8 42 66.7
Psat5g255640 Pisum sativum HOM05D000323 ORTHO05D000201 4.1e-07 57.4 42 64.3
Ciclev10027911m.g Citrus clementina HOM05D000323 ORTHO05D000201 5.4e-07 57.0 42 69.0
Medtr4g055290 Medicago truncatula HOM05D000323 ORTHO05D000201 7.0e-07 56.6 42 61.9
Os01g0857500 Oryza sativa ssp. japonica HOM05D000323 ORTHO05D000201 7.0e-07 56.6 42 64.3
Pp3c13_10930 Physcomitrium patens HOM05D000323 ORTHO05D000201 7.0e-07 56.6 42 59.5
Psat7g191080 Pisum sativum HOM05D000323 ORTHO05D000201 7.0e-07 56.6 42 66.7
Medtr2g103510 Medicago truncatula HOM05D000323 ORTHO05D000201 9.2e-07 56.2 39 66.7
TPR.G32392 Trifolium pratense HOM05D000323 ORTHO05D000201 9.2e-07 56.2 42 66.7
HanXRQChr14g0452011 Helianthus annuus HOM05D000323 ORTHO05D000201 1.2e-06 55.8 39 74.4
HanXRQChr07g0197771 Helianthus annuus HOM05D000323 ORTHO05D000201 1.6e-06 55.5 39 69.2
Mapoly0091s0002 Marchantia polymorpha HOM05D000323 ORTHO05D000201 1.6e-06 55.5 40 60.0
Pp3c3_8470 Physcomitrium patens HOM05D000323 ORTHO05D000201 2.1e-06 55.1 42 61.9
unitig_747.g21956 Utricularia gibba HOM05D000323 ORTHO05D000201 2.1e-06 55.1 42 64.3
Zm00001eb367000 Zea mays HOM05D000323 ORTHO05D000201 2.1e-06 55.1 42 64.3
Zm00001eb111040 Zea mays HOM05D000323 ORTHO05D000201 2.7e-06 54.7 42 61.9
unitig_0.g1489 Utricularia gibba HOM05D000323 ORTHO05D000201 3.5e-06 54.3 42 64.3
TPR.G15585 Trifolium pratense HOM05D000323 ORTHO05D000201 6.0e-06 53.5 42 64.3


User provided reference genes

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