Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 4.9e-91 337.8 172 100.0
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 6.4e-75 284.3 183 82.5
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 6.0e-49 198.0 228 54.4
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 4.9e-43 178.3 228 46.9
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 1.4e-42 176.8 228 46.9
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 1.4e-42 176.8 228 46.5
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 4.2e-42 175.3 228 45.6
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 4.2e-42 175.3 228 45.6
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 4.2e-42 175.3 228 45.6
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 7.1e-42 174.5 228 47.4
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 3.5e-41 172.2 228 45.2
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 3.5e-41 172.2 228 45.2
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 7.9e-41 171.0 228 45.2
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.0e-40 170.6 228 44.7
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.8e-40 169.9 228 45.6
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 3.9e-40 168.7 228 44.3
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 5.1e-40 168.3 228 44.3
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 1.5e-39 166.8 228 44.3
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 1.9e-39 166.4 228 46.5
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 1.9e-39 166.4 228 45.2
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 2.5e-39 166.0 227 43.2
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 4.3e-39 165.2 228 44.7
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 5.6e-39 164.9 228 43.0
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 7.4e-39 164.5 228 43.9
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.6e-38 163.3 228 43.9
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.6e-38 163.3 228 43.9
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.6e-38 163.3 228 43.4
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 1.6e-38 163.3 227 43.6
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 1.6e-38 163.3 228 44.3
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 6.2e-38 161.4 228 42.5
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 8.2e-38 161.0 228 42.5
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 1.8e-37 159.8 228 44.3
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 2.4e-37 159.5 228 42.5
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 3.1e-37 159.1 227 43.2
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 4.0e-37 158.7 228 43.0
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 4.0e-37 158.7 228 43.0
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 4.0e-37 158.7 228 42.1
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 5.3e-37 158.3 228 43.4
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 5.3e-37 158.3 228 42.1
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 5.3e-37 158.3 228 44.3
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 9.0e-37 157.5 228 41.7
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 1.2e-36 157.1 228 41.7
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 1.5e-36 156.8 228 43.0
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 2.6e-36 156.0 228 42.5
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 3.4e-36 155.6 228 42.1
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 5.8e-36 154.8 214 44.9
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 7.6e-36 154.5 228 42.1
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 2.2e-35 152.9 228 44.3
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 6.5e-35 151.4 228 41.2
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 8.4e-35 151.0 228 42.1
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 8.4e-35 151.0 230 42.6
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 1.1e-34 150.6 228 42.1
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 1.9e-34 149.8 228 40.8
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 4.2e-34 148.7 228 42.1
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 5.5e-34 148.3 228 39.9
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.2e-33 147.1 228 41.2
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 2.7e-33 146.0 228 41.7
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 2.7e-33 146.0 228 41.7
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 2.7e-33 146.0 229 41.0
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 3.5e-33 145.6 228 39.5
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 4.6e-33 145.2 228 41.7
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 4.6e-33 145.2 211 45.5
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 5.1e-32 141.7 230 40.4
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 6.7e-32 141.4 169 52.1
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 6.7e-32 141.4 228 40.4
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.1e-31 140.6 228 37.3
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 1.5e-31 140.2 228 38.2
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 2.5e-31 139.4 99 74.7
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 2.5e-31 139.4 229 38.4
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 4.3e-31 138.7 229 38.9
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 5.7e-31 138.3 226 37.6
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 7.4e-31 137.9 228 37.7
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 1.6e-30 136.7 229 37.6
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 3.7e-30 135.6 228 36.0
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 4.8e-30 135.2 228 37.7
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 6.3e-30 134.8 228 38.2
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 1.8e-29 133.3 229 39.3
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 3.1e-29 132.5 228 35.1
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 4.1e-29 132.1 228 38.2
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 4.1e-29 132.1 228 37.7
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 2.6e-28 129.4 228 36.8
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.7e-27 126.7 230 36.1
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 2.9e-27 125.9 230 36.1
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 2.9e-27 125.9 230 36.5
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 5.0e-27 125.2 230 35.7
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 5.0e-27 125.2 184 42.9
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 1.1e-26 124.0 230 35.2
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 2.5e-26 122.9 230 34.3
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 3.2e-26 122.5 229 34.9
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 3.2e-26 122.5 229 34.9
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 7.2e-26 121.3 228 35.1
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 6.1e-25 118.2 204 39.2
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 3.0e-24 115.9 208 39.4
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 5.1e-24 115.2 228 34.2
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 1.1e-23 114.0 204 39.2
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 1.5e-23 113.6 230 32.6
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.5e-23 113.6 230 32.6
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.5e-23 113.6 230 32.6
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 3.3e-23 112.5 230 32.2
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 3.3e-23 112.5 230 32.2
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 7.4e-23 111.3 200 38.5
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 7.2e-18 94.7 230 32.2
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 1.8e-13 80.1 228 30.3
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.0e-11 74.3 182 32.4
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 5.0e-11 72.0 60 58.3
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.5e-10 69.7 78 46.2


User provided reference genes

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