Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 4.4e-53 211.1 109 100.0
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 3.4e-29 131.7 89 77.5
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-28 129.4 102 62.7
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-28 129.4 102 62.7
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.8e-28 128.6 107 59.8
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-28 128.3 102 60.8
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-28 127.5 102 61.8
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-27 126.7 102 58.8
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-27 126.3 102 58.8
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-27 126.3 102 58.8
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-27 125.9 102 58.8
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 2.4e-27 125.6 102 58.8
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-27 124.4 110 58.2
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 5.4e-27 124.4 102 58.8
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-27 124.4 102 57.8
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.1e-27 123.6 104 59.6
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.1e-27 123.6 108 54.6
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 9.1e-27 123.6 102 57.8
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-27 123.6 102 57.8
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 1.2e-26 123.2 102 59.8
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 4.5e-26 121.3 102 56.9
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 5.9e-26 120.9 104 58.7
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-26 120.6 97 60.8
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-25 120.2 109 56.0
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-25 117.1 110 52.7
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-24 116.7 109 54.1
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-24 116.3 102 55.9
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 7.2e-24 114.0 101 54.5
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.2e-24 114.0 97 57.7
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-23 113.2 102 53.9
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.6e-23 112.8 106 52.8
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-23 112.8 97 56.7
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-23 112.5 97 58.8
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-23 112.5 109 51.4
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.7e-23 111.3 106 52.8
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-23 110.5 91 56.0
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 8.0e-23 110.5 106 51.9
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-22 109.8 110 49.1
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 1.8e-22 109.4 97 57.7
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-22 109.0 91 54.9
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-22 109.0 91 54.9
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-22 107.5 91 53.8
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-22 107.5 91 53.8
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-21 105.9 91 52.7
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 2.6e-21 105.5 83 61.4
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-21 105.5 91 52.7
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 3.4e-21 105.1 100 52.0
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-21 104.8 86 55.8
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-20 103.2 82 57.3
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-20 102.8 82 58.5
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 2.2e-20 102.4 86 58.1
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.8e-20 102.1 95 53.7
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 3.7e-20 101.7 81 60.5
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 4.9e-20 101.3 107 47.7
SHI43061 Sapria himalayana HOM05D000002 ORTHO05D004433 8.3e-20 100.5 82 56.1
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 1.1e-19 100.1 100 50.0
Oeu030662.1 Olea europaea HOM05D000002 ORTHO05D004433 1.1e-19 100.1 61 82.0
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-19 100.1 102 50.0
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-19 100.1 102 50.0
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.1e-19 98.6 95 50.5
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-19 98.6 101 51.5
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 4.1e-19 98.2 106 46.2
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-19 97.8 77 57.1
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 9.2e-19 97.1 107 45.8
Sopen12g018110 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-18 95.9 102 46.1
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-18 95.1 102 48.0
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-17 93.6 73 60.3
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 2.9e-17 92.0 105 41.0
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 6.6e-17 90.9 95 46.3
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 8.6e-17 90.5 107 43.0
SHI03641 Sapria himalayana HOM05D000002 ORTHO05D004433 8.6e-17 90.5 74 58.1
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.3e-16 88.2 105 45.7
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-16 87.8 88 47.7
PGSC0003DMG400001585 Solanum tuberosum HOM05D000002 ORTHO05D004433 5.6e-16 87.8 91 46.2
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-15 86.3 71 56.3
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-15 86.3 79 55.7
Oeu010596.1 Olea europaea HOM05D000002 ORTHO05D004433 1.4e-14 83.2 61 67.2
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-14 82.4 67 58.2
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-14 82.0 90 46.7
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 6.8e-14 80.9 68 61.8
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 8.9e-14 80.5 89 43.8
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-13 79.3 67 56.7
Thhalv10000559m.g Eutrema salsugineum HOM05D008571 ORTHO05D004433 3.4e-13 78.6 82 46.3
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.8e-13 77.8 97 44.3
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.8e-13 77.8 95 45.3
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 2.9e-12 75.5 108 39.8
Oeu044197.1 Olea europaea HOM05D000002 ORTHO05D004433 3.7e-12 75.1 54 66.7
CSS0036927 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 4.9e-12 74.7 92 44.6
Sopen05g008270 Solanum pennellii HOM05D000006 ORTHO05D000695 6.4e-12 74.3 105 38.1
CSS0010788 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 5.4e-11 71.2 54 59.3
SHI37107 Sapria himalayana HOM05D000002 ORTHO05D004433 5.4e-11 71.2 59 57.6
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 9.2e-11 70.5 100 42.0
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 1.6e-10 69.7 65 49.2
Ah.16g106890 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.0e-10 69.3 60 53.3
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-10 68.6 96 43.8
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 3.5e-10 68.6 52 71.2
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 6.0e-10 67.8 67 47.8
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 7.8e-10 67.4 54 66.7
Nn3g20325 Nelumbo nucifera HOM05D008571 ORTHO05D004433 1.0e-09 67.0 64 50.0
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 3.0e-09 65.5 70 44.3
CAN.G1829.1 Capsicum annuum HOM05D000583 ORTHO05D004433 5.0e-09 64.7 74 43.2
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.0e-09 64.7 53 64.2
Sed0004206 Sechium edule HOM05D000002 ORTHO05D004433 5.0e-09 64.7 43 67.4
PGSC0003DMG400024370 Solanum tuberosum HOM05D008571 ORTHO05D011280 5.0e-09 64.7 59 45.8
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-09 63.9 43 69.8
PGSC0003DMG400040582 Solanum tuberosum HOM05D008571 ORTHO05D011280 8.6e-09 63.9 72 40.3
Sopen02g010540 Solanum pennellii HOM05D008571 ORTHO05D011280 1.9e-08 62.8 59 44.1
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 2.5e-08 62.4 66 43.9
SHI07420 Sapria himalayana HOM05D000002 ORTHO05D004433 5.6e-08 61.2 65 46.2
Sopen05g024280 Solanum pennellii HOM05D008571 ORTHO05D011280 5.6e-08 61.2 59 44.1
Sopen08g023440 Solanum pennellii HOM05D003027 ORTHO05D011280 5.6e-08 61.2 59 42.4
SHI09918 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-07 60.1 50 56.0
Cpa.g.sc3.333 Carica papaya HOM05D000002 ORTHO05D004433 2.8e-07 58.9 102 38.2
CsaV3_6G015590 Cucumis sativus L. HOM05D000002 ORTHO05D004433 2.8e-07 58.9 52 50.0
PGSC0003DMG400034324 Solanum tuberosum HOM05D000002 ORTHO05D004433 2.8e-07 58.9 61 44.3
PGSC0003DMG400021964 Solanum tuberosum HOM05D008571 ORTHO05D011280 6.2e-07 57.8 59 40.7
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 1.1e-06 57.0 86 37.2
Oeu033717.1 Olea europaea HOM05D000002 ORTHO05D004433 3.1e-06 55.5 44 68.2
PGSC0003DMG400038206 Solanum tuberosum HOM05D008571 ORTHO05D011280 4.0e-06 55.1 66 40.9
SHI32312 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-06 54.3 77 39.0


User provided reference genes

Program Settings