Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034359.1 Olea europaea HOM05D002960 ORTHO05D003632 4.9e-109 397.9 214 100.0
Oeu040525.2 Olea europaea HOM05D002960 ORTHO05D003632 6.5e-93 344.4 214 86.4
SalBow3G4009 Salvia bowleyana HOM05D002960 ORTHO05D003632 5.3e-71 271.6 210 71.0
MSTRG.5818 Avicennia marina HOM05D002960 ORTHO05D003632 1.3e-69 266.9 216 71.3
Cc06_g05410 Coffea canephora HOM05D002960 ORTHO05D003632 9.7e-65 250.8 218 67.9
Migut.J00974 Erythranthe guttata HOM05D002960 ORTHO05D003632 4.8e-64 248.4 216 65.7
TAR627G0210 Trochodendron aralioides HOM05D002960 ORTHO05D003632 8.2e-64 247.7 217 63.6
Peaxi162Scf00820g00510 Petunia axillaris HOM05D002960 ORTHO05D003632 7.0e-63 244.6 212 67.5
TAR636G2825 Trochodendron aralioides HOM05D002960 ORTHO05D003632 7.0e-63 244.6 215 60.5
PGSC0003DMG400002680 Solanum tuberosum HOM05D002960 ORTHO05D003632 9.1e-63 244.2 211 66.8
unitig_744.g24693 Utricularia gibba HOM05D002960 ORTHO05D003632 1.6e-62 243.4 212 66.0
Nitab4.5_0011344g0010 Nicotiana tabacum HOM05D002960 ORTHO05D003632 2.0e-62 243.0 211 66.8
Solyc09g009180.3 Solanum lycopersicum HOM05D002960 ORTHO05D003632 2.0e-62 243.0 212 66.0
Sopen09g003910 Solanum pennellii HOM05D002960 ORTHO05D003632 2.0e-62 243.0 212 66.0
Nitab4.5_0004686g0030 Nicotiana tabacum HOM05D002960 ORTHO05D003632 3.5e-62 242.3 212 66.0
Nitab4.5_0009950g0010 Nicotiana tabacum HOM05D002960 ORTHO05D003632 3.5e-62 242.3 212 66.0
CAN.G824.20 Capsicum annuum HOM05D002960 ORTHO05D003632 4.5e-62 241.9 213 65.7
Lj2A132T53 Lonicera japonica HOM05D002960 ORTHO05D003632 5.9e-62 241.5 217 65.9
Nitab4.5_0008581g0010 Nicotiana tabacum HOM05D002960 ORTHO05D003632 5.9e-62 241.5 212 66.0
PSO266G0049 Papaver somniferum HOM05D002960 ORTHO05D003632 1.7e-61 240.0 218 62.4
Actinidia08427 Actinidia chinensis HOM05D002960 ORTHO05D003632 8.5e-61 237.7 215 64.2
Hma1.2p1_0084F.1_g043400 Hydrangea macrophylla HOM05D002960 ORTHO05D003632 1.1e-60 237.3 218 63.8
Nn1g01680 Nelumbo nucifera HOM05D002960 ORTHO05D003632 4.2e-60 235.3 216 63.0
Dinv21238 Davidia involucrata HOM05D002960 ORTHO05D003632 5.5e-60 235.0 215 63.3
Actinidia05449 Actinidia chinensis HOM05D002960 ORTHO05D003632 2.7e-59 232.6 165 69.1
PSO478G2229 Papaver somniferum HOM05D002960 ORTHO05D003632 4.7e-59 231.9 221 60.6
CSS0012044 Camellia sinensis var. sinensis HOM05D002960 ORTHO05D003632 6.1e-59 231.5 216 64.4
Aqoxy1G00557 Aquilegia oxysepala HOM05D002960 ORTHO05D003632 8.0e-59 231.1 164 69.5
CsaV3_3G017580 Cucumis sativus L. HOM05D002960 ORTHO05D003632 3.0e-58 229.2 217 60.8
CDE04G1460 Ceratophyllum demersum HOM05D002960 ORTHO05D003632 6.8e-58 228.0 212 60.8
ClCG05G008490 Citrullus lanatus HOM05D002960 ORTHO05D003632 1.2e-57 227.3 218 60.6
CSS0002001 Camellia sinensis var. sinensis HOM05D002960 ORTHO05D003632 3.7e-56 222.2 214 55.1
CDE02G1775 Ceratophyllum demersum HOM05D002960 ORTHO05D003632 6.3e-56 221.5 212 60.8
Aqoxy3G00494 Aquilegia oxysepala HOM05D002960 ORTHO05D003632 1.1e-55 220.7 214 59.3
vmacro07383 Vaccinium macrocarpon HOM05D002960 ORTHO05D003632 1.8e-55 219.9 219 59.4
Ah.15g089750 Amaranthus hybridus HOM05D002960 ORTHO05D003632 2.4e-55 219.5 214 59.3
Ah.15g089760 Amaranthus hybridus HOM05D002960 ORTHO05D003632 2.4e-55 219.5 214 59.3
Ah.15g089770 Amaranthus hybridus HOM05D002960 ORTHO05D003632 2.4e-55 219.5 214 59.3
CiPaw.03G199900 Carya illinoinensis HOM05D002960 ORTHO05D003632 2.4e-55 219.5 217 57.1
Gohir.A12G253400 Gossypium hirsutum HOM05D002960 ORTHO05D003632 2.4e-55 219.5 214 58.9
Sed0004875 Sechium edule HOM05D002960 ORTHO05D003632 3.1e-55 219.2 215 60.0
RcHm_v2.0_Chr1g0378591 Rosa chinensis HOM05D002960 ORTHO05D003632 7.0e-55 218.0 217 57.1
COL.COLO4_29794 Corchorus olitorius HOM05D002960 ORTHO05D003632 9.1e-55 217.6 213 60.6
Gohir.D04G102900 Gossypium hirsutum HOM05D002960 ORTHO05D003632 9.1e-55 217.6 162 66.0
Ah.05g171480 Amaranthus hybridus HOM05D002960 ORTHO05D003632 2.0e-54 216.5 214 58.4
Ciclev10030891m.g Citrus clementina HOM05D002960 ORTHO05D003632 2.0e-54 216.5 159 62.3
Os04g0307200 Oryza sativa ssp. japonica HOM05D002960 ORTHO05D003632 2.0e-54 216.5 212 60.4
QL07p039962 Quercus lobata HOM05D002960 ORTHO05D003632 2.0e-54 216.5 208 61.1
Gorai.008G273800 Gossypium raimondii HOM05D002960 ORTHO05D003632 2.7e-54 216.1 214 58.4
Gorai.009G406200 Gossypium raimondii HOM05D002960 ORTHO05D003632 2.7e-54 216.1 162 66.0
AUR62021103 Chenopodium quinoa HOM05D002960 ORTHO05D003632 4.5e-54 215.3 215 59.5
MD01G1210000 Malus domestica HOM05D002960 ORTHO05D003632 5.9e-54 214.9 218 56.9
Lj6g0018011 Lotus japonicus HOM05D002960 ORTHO05D003632 7.7e-54 214.5 165 62.4
Hund11709 Selenicereus undatus HOM05D002960 ORTHO05D003632 7.7e-54 214.5 215 57.2
Duzib205G1208 Durio zibethinus HOM05D002960 ORTHO05D003632 1.0e-53 214.2 214 56.5
QL11p003257 Quercus lobata HOM05D002960 ORTHO05D003632 1.0e-53 214.2 214 56.1
Manes.06G153311 Manihot esculenta HOM05D002960 ORTHO05D003632 1.3e-53 213.8 216 58.8
Gohir.A04G065342 Gossypium hirsutum HOM05D002960 ORTHO05D003632 1.7e-53 213.4 163 64.4
Gohir.D12G255700 Gossypium hirsutum HOM05D002960 ORTHO05D003632 1.7e-53 213.4 214 57.9
Cpa.g.sc107.126 Carica papaya HOM05D002960 ORTHO05D003632 2.2e-53 213.0 218 58.3
Haze_05396 Corylus avellana HOM05D002960 ORTHO05D003632 2.2e-53 213.0 216 57.4
CANSAT11G1379 Cannabis sativa HOM05D002960 ORTHO05D003632 2.9e-53 212.6 219 57.5
Potri.017G148800 Populus trichocarpa HOM05D002960 ORTHO05D003632 2.9e-53 212.6 215 57.7
Rhsim03G0078900 Rhododendron simsii HOM05D002960 ORTHO05D003632 3.8e-53 212.2 165 63.6
arahy.Tifrunner.gnm1.ann1.0GK98G Arachis hypogaea HOM05D002960 ORTHO05D003632 5.0e-53 211.8 165 61.2
arahy.Tifrunner.gnm1.ann1.LVPM4A Arachis hypogaea HOM05D002960 ORTHO05D003632 5.0e-53 211.8 165 61.2
Carub.0002s2756 Capsella rubella HOM05D002960 ORTHO05D003632 5.0e-53 211.8 148 66.2
Sp5g35840 Schrenkiella parvula HOM05D002960 ORTHO05D003632 5.0e-53 211.8 148 64.9
THA.LOC104811944 Tarenaya hassleriana HOM05D002960 ORTHO05D003632 5.0e-53 211.8 152 66.4
HanXRQChr07g0202321 Helianthus annuus HOM05D002960 ORTHO05D003632 6.5e-53 211.5 162 63.6
Actinidia03141 Actinidia chinensis HOM05D002960 ORTHO05D003632 8.5e-53 211.1 224 54.5
AUR62031437 Chenopodium quinoa HOM05D002960 ORTHO05D003632 8.5e-53 211.1 153 64.7
COL.COLO4_30293 Corchorus olitorius HOM05D002960 ORTHO05D003632 1.1e-52 210.7 216 57.4
Glyma.15G183400 Glycine max HOM05D002960 ORTHO05D003632 1.1e-52 210.7 162 59.9
AT1G79940 Arabidopsis thaliana HOM05D002960 ORTHO05D003632 1.5e-52 210.3 148 65.5
CiPaw.04G140400 Carya illinoinensis HOM05D002960 ORTHO05D003632 1.5e-52 210.3 220 54.1
FAN10G1974 Fragaria x ananassa HOM05D002960 ORTHO05D003632 1.5e-52 210.3 218 55.0
FAN10G3414 Fragaria x ananassa HOM05D002960 ORTHO05D003632 1.5e-52 210.3 218 55.0
Glyma.09G075400 Glycine max HOM05D002960 ORTHO05D003632 1.9e-52 209.9 216 54.6
Sabra04G0047600 Salix brachista HOM05D002960 ORTHO05D003632 1.9e-52 209.9 213 56.8
Cfa019929 Carpinus fangiana HOM05D002960 ORTHO05D003632 2.5e-52 209.5 216 56.9
Ca_02287_v3 Cicer arietinum L. HOM05D002960 ORTHO05D003632 3.2e-52 209.1 161 62.1
Thhalv10018223m.g Eutrema salsugineum HOM05D002960 ORTHO05D003632 3.2e-52 209.1 148 64.9
ATR0564G109 Amborella trichopoda HOM05D002960 ORTHO05D003632 4.2e-52 208.8 220 51.4
Lalb_Chr01g0018271 Lupinus albus HOM05D002960 ORTHO05D003632 4.2e-52 208.8 207 57.0
Manes.14G021200 Manihot esculenta HOM05D002960 ORTHO05D003632 4.2e-52 208.8 215 56.7
Phvul.009G223000 Phaseolus vulgaris HOM05D002960 ORTHO05D003632 4.2e-52 208.8 214 55.6
PGR042G1381 Punica granatum HOM05D002960 ORTHO05D003632 4.2e-52 208.8 214 55.6
Duzib106G0653 Durio zibethinus HOM05D002960 ORTHO05D003632 5.5e-52 208.4 211 58.8
DCAR_008897 Daucus carota HOM05D002960 ORTHO05D003632 7.2e-52 208.0 216 57.9
Medtr2g044580 Medicago truncatula HOM05D002960 ORTHO05D003632 9.4e-52 207.6 162 61.7
Sabra17G0124100 Salix brachista HOM05D002960 ORTHO05D003632 9.4e-52 207.6 212 57.1
GSVIVG01028825001 Vitis vinifera HOM05D002960 ORTHO05D003632 9.4e-52 207.6 143 66.4
FvH4_7g30440 Fragaria vesca HOM05D002960 ORTHO05D003632 1.2e-51 207.2 217 54.8
FAN01G2731 Fragaria x ananassa HOM05D002960 ORTHO05D003632 1.2e-51 207.2 217 54.8
FAN03G0384 Fragaria x ananassa HOM05D002960 ORTHO05D003632 1.2e-51 207.2 217 54.8
FAN03G1579 Fragaria x ananassa HOM05D002960 ORTHO05D003632 1.2e-51 207.2 217 54.8
FAN06G4953 Fragaria x ananassa HOM05D002960 ORTHO05D003632 1.2e-51 207.2 217 54.8
Sed0001248 Sechium edule HOM05D002960 ORTHO05D003632 1.2e-51 207.2 202 58.9
VMungo1309G1262 Vigna mungo HOM05D002960 ORTHO05D003632 1.6e-51 206.8 214 55.6
Psat1g137760 Pisum sativum HOM05D002960 ORTHO05D003632 2.1e-51 206.5 162 61.1
SEGI_20479 Sequoiadendron giganteum HOM05D002960 ORTHO05D003632 2.1e-51 206.5 145 64.8
A07p26400 Brassica napus HOM05D002960 ORTHO05D003632 2.7e-51 206.1 148 63.5
BolC6t38049H Brassica oleracea HOM05D002960 ORTHO05D003632 2.7e-51 206.1 148 63.5
BraA07t30284Z Brassica rapa HOM05D002960 ORTHO05D003632 2.7e-51 206.1 148 63.5
CARHR074540 Cardamine hirsuta HOM05D002960 ORTHO05D003632 3.6e-51 205.7 148 63.5
Lj1A1006G38 Lonicera japonica HOM05D002960 ORTHO05D003632 3.6e-51 205.7 217 53.5
FAN06G3309 Fragaria x ananassa HOM05D002960 ORTHO05D003632 4.7e-51 205.3 217 54.4
EL10Ac3g05404 Beta vulgaris HOM05D002960 ORTHO05D003632 6.1e-51 204.9 222 56.3
Duzib084G0224 Durio zibethinus HOM05D002960 ORTHO05D003632 6.1e-51 204.9 220 55.9
Aa31LG4G250 Aethionema arabicum HOM05D002960 ORTHO05D003632 8.0e-51 204.5 200 57.0
Atru.chr8.1225 Acer truncatum HOM05D002960 ORTHO05D003632 1.0e-50 204.1 216 53.7
DCAR_020274 Daucus carota HOM05D002960 ORTHO05D003632 1.0e-50 204.1 216 53.2
Prupe.2G302300 Prunus persica HOM05D002960 ORTHO05D003632 1.0e-50 204.1 222 55.4
Lalb_Chr08g0232801 Lupinus albus HOM05D002960 ORTHO05D003632 1.4e-50 203.8 211 55.0
Hund04797 Selenicereus undatus HOM05D002960 ORTHO05D003632 1.4e-50 203.8 215 56.3
Zm00001eb086520 Zea mays HOM05D002960 ORTHO05D003632 1.4e-50 203.8 211 57.8
C06p28790 Brassica napus HOM05D002960 ORTHO05D003632 2.3e-50 203.0 178 61.2
Hma1.2p1_1713F.1_g298870 Hydrangea macrophylla HOM05D002960 ORTHO05D003632 2.3e-50 203.0 215 55.3
Potri.004G072200 Populus trichocarpa HOM05D002960 ORTHO05D003632 3.0e-50 202.6 216 55.6
Thecc.05G083700 Theobroma cacao HOM05D002960 ORTHO05D003632 4.0e-50 202.2 132 69.7
TPR.G20789 Trifolium pratense HOM05D002960 ORTHO05D003632 5.2e-50 201.8 213 53.5
vmacro14679 Vaccinium macrocarpon HOM05D002960 ORTHO05D003632 5.2e-50 201.8 163 59.5
Cfa019431 Carpinus fangiana HOM05D002960 ORTHO05D003632 6.8e-50 201.4 214 50.5
AL2G41600 Arabidopsis lyrata HOM05D002960 ORTHO05D003632 3.4e-49 199.1 218 56.9
TWI14G0129 Tripterygium wilfordii HOM05D002960 ORTHO05D003632 3.4e-49 199.1 210 55.7
Lalb_Chr11g0073951 Lupinus albus HOM05D002960 ORTHO05D003632 4.4e-49 198.7 210 54.3
Sc13g0009270 Simmondsia chinensis HOM05D002960 ORTHO05D003632 7.5e-49 198.0 215 55.3
Thecc.03G185900 Theobroma cacao HOM05D002960 ORTHO05D003632 7.5e-49 198.0 214 54.7
Dinv09615 Davidia involucrata HOM05D002960 ORTHO05D003632 1.3e-48 197.2 215 54.9
Rhsim09G0201000 Rhododendron simsii HOM05D002960 ORTHO05D003632 2.2e-48 196.4 153 60.8
CSS0035474 Camellia sinensis var. sinensis HOM05D002960 ORTHO05D003632 3.7e-48 195.7 214 51.4
ECA232G0210 Erigeron canadensis HOM05D002960 ORTHO05D003632 3.7e-48 195.7 162 59.3
TWI39G0419 Tripterygium wilfordii HOM05D002960 ORTHO05D003632 8.3e-48 194.5 223 54.7
HanXRQChr14g0433471 Helianthus annuus HOM05D002960 ORTHO05D003632 2.0e-46 189.9 156 55.8
MD07G1280100 Malus domestica HOM05D002960 ORTHO05D003632 2.0e-46 189.9 174 55.7
Eucgr.A00001 Eucalyptus grandis HOM05D002960 ORTHO05D003632 3.5e-46 189.1 214 53.3
SHI09095 Sapria himalayana HOM05D002960 ORTHO05D003632 7.7e-46 188.0 162 56.2
Lalb_Chr23g0276131 Lupinus albus HOM05D002960 ORTHO05D003632 1.0e-45 187.6 165 54.5
MSTRG.8700 Avicennia marina HOM05D002960 ORTHO05D003632 2.3e-45 186.4 147 61.2
SGA_v2.0_scaffold2945G54246 Striga asiatica HOM05D002960 ORTHO05D003632 2.3e-45 186.4 121 70.2
Lsat_1_v5_gn_9_56821 Lactuca sativa HOM05D002960 ORTHO05D003632 2.9e-45 186.0 146 58.2
Pp3c20_22800 Physcomitrium patens HOM05D002960 ORTHO05D003632 3.8e-45 185.7 159 54.1
Cc02_g02260 Coffea canephora HOM05D002960 ORTHO05D003632 5.0e-45 185.3 182 56.6
SalBow4G0209 Salvia bowleyana HOM05D002960 ORTHO05D003632 5.0e-45 185.3 220 50.0
unitig_37.g11973 Utricularia gibba HOM05D002960 ORTHO05D003632 1.9e-44 183.3 148 59.5
ECA238G2360 Erigeron canadensis HOM05D002960 ORTHO05D003632 4.3e-44 182.2 181 53.6
Lsat_1_v5_gn_2_22661 Lactuca sativa HOM05D002960 ORTHO05D003632 4.3e-44 182.2 158 56.3
Mapoly0090s0076 Marchantia polymorpha HOM05D002960 ORTHO05D003632 4.3e-44 182.2 165 56.4
Nitab4.5_0000472g0060 Nicotiana tabacum HOM05D002960 ORTHO05D003632 4.3e-44 182.2 161 54.7
CAN.G2487.1 Capsicum annuum HOM05D002960 ORTHO05D003632 7.3e-44 181.4 162 53.7
Dinv35266 Davidia involucrata HOM05D002960 ORTHO05D003632 7.3e-44 181.4 165 54.5
HPP92_013501 Vanilla planifolia HOM05D002960 ORTHO05D003632 7.3e-44 181.4 162 54.9
Nitab4.5_0001331g0010 Nicotiana tabacum HOM05D002960 ORTHO05D003632 1.2e-43 180.6 159 53.5
AL7G32940 Arabidopsis lyrata HOM05D002960 ORTHO05D003632 1.6e-43 180.3 161 57.8
Carub.0007s2025 Capsella rubella HOM05D002960 ORTHO05D003632 4.7e-43 178.7 142 60.6
Oeu027867.1 Olea europaea HOM05D002960 ORTHO05D003632 8.0e-43 177.9 216 51.9
CARHR227760 Cardamine hirsuta HOM05D002960 ORTHO05D003632 1.4e-42 177.2 142 59.2
Migut.F00279 Erythranthe guttata HOM05D002960 ORTHO05D003632 1.8e-42 176.8 143 59.4
Solyc03g007610.4 Solanum lycopersicum HOM05D002960 ORTHO05D003632 1.8e-42 176.8 164 53.7
Sopen03g003560 Solanum pennellii HOM05D002960 ORTHO05D003632 2.3e-42 176.4 159 53.5
PGSC0003DMG402009494 Solanum tuberosum HOM05D002960 ORTHO05D003632 2.0e-41 173.3 159 52.8
Thhalv10024622m.g Eutrema salsugineum HOM05D002960 ORTHO05D003632 4.4e-41 172.2 141 57.4
BcaC09g51249 Brassica carinata HOM05D002960 ORTHO05D003632 9.8e-41 171.0 149 56.4
C01p15120 Brassica napus HOM05D002960 ORTHO05D003632 9.8e-41 171.0 149 56.4
BolC1t01461H Brassica oleracea HOM05D002960 ORTHO05D003632 9.8e-41 171.0 149 56.4
AT4G21180 Arabidopsis thaliana HOM05D002960 ORTHO05D003632 1.3e-40 170.6 164 53.7
Sp7g19260 Schrenkiella parvula HOM05D002960 ORTHO05D003632 1.7e-40 170.2 142 56.3
BcaNung03836 Brassica carinata HOM05D002960 ORTHO05D003632 4.9e-40 168.7 149 55.7
A01p12530 Brassica napus HOM05D002960 ORTHO05D003632 6.4e-40 168.3 156 53.8
BraA01t01198Z Brassica rapa HOM05D002960 ORTHO05D003632 1.4e-39 167.2 149 54.4
CBR_g22342 Chara braunii HOM05D002960 ORTHO05D003632 2.4e-39 166.4 163 47.2
SGA_v2.0_scaffold60G21120 Striga asiatica HOM05D002960 ORTHO05D003632 2.0e-38 163.3 142 54.9
AagrBONN_evm.TU.Sc2ySwM_117.2502 Anthoceros agrestis HOM05D002960 ORTHO05D003632 2.3e-37 159.8 162 49.4
SMO364G0140 Selaginella moellendorffii HOM05D002960 ORTHO05D003632 4.3e-36 155.6 199 44.2
Dinv31654 Davidia involucrata HOM05D002960 ORTHO05D003632 2.1e-35 153.3 218 52.3
HPP92_021751 Vanilla planifolia HOM05D002960 ORTHO05D003632 6.2e-35 151.8 117 65.8
Peaxi162Scf00444g00247 Petunia axillaris HOM05D002960 ORTHO05D003632 5.8e-33 145.2 121 52.9
Haze_26075 Corylus avellana HOM05D002960 ORTHO05D003632 5.0e-29 132.1 107 59.8
HPP92_026054 Vanilla planifolia HOM05D002960 ORTHO05D003632 1.8e-26 123.6 102 56.9
Actinidia31843 Actinidia chinensis HOM05D002960 ORTHO05D003632 2.3e-26 123.2 168 52.4
C06p54330 Brassica napus HOM05D002960 ORTHO05D003632 2.3e-26 123.2 99 60.6
BolC6t40444H Brassica oleracea HOM05D002960 ORTHO05D003632 2.3e-26 123.2 99 60.6
BcaC08g47593 Brassica carinata HOM05D002960 ORTHO05D024096 2.7e-22 109.8 79 64.6
CAN.G126.39 Capsicum annuum HOM05D002960 ORTHO05D003632 1.5e-12 77.4 52 63.5
CDE02G1624 Ceratophyllum demersum HOM05D002960 ORTHO05D024096 2.1e-11 73.6 54 57.4
BcaC08g47592 Brassica carinata HOM05D002960 ORTHO05D003632 2.7e-06 56.6 29 79.3


User provided reference genes

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