Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034339.1 Olea europaea HOM05D005781 ORTHO05D006835 5.1e-50 200.7 95 100.0
Oeu052918.1 Olea europaea HOM05D005781 ORTHO05D006835 1.0e-37 159.8 95 81.1
Cc05_g05310 Coffea canephora HOM05D005781 ORTHO05D006835 2.0e-30 135.6 96 66.7
Ciclev10023034m.g Citrus clementina HOM05D005781 ORTHO05D006835 4.5e-30 134.4 98 69.4
Manes.01G244300 Manihot esculenta HOM05D005781 ORTHO05D006835 4.5e-30 134.4 98 69.4
Sopen07g026470 Solanum pennellii HOM05D005781 ORTHO05D006835 5.9e-30 134.0 96 65.6
Manes.02G161400 Manihot esculenta HOM05D005781 ORTHO05D006835 7.7e-30 133.7 98 67.3
Hund27185 Selenicereus undatus HOM05D005781 ORTHO05D006835 1.3e-29 132.9 96 70.8
CiPaw.06G025900 Carya illinoinensis HOM05D005781 ORTHO05D006835 1.7e-29 132.5 96 66.7
Dinv12261 Davidia involucrata HOM05D005781 ORTHO05D006835 1.7e-29 132.5 96 69.8
Thecc.01G232600 Theobroma cacao HOM05D005781 ORTHO05D006835 5.0e-29 131.0 98 67.3
Eucgr.D02385 Eucalyptus grandis HOM05D005781 ORTHO05D006835 6.5e-29 130.6 97 66.0
ClCG05G000700 Citrullus lanatus HOM05D005781 ORTHO05D006835 8.5e-29 130.2 95 63.2
TWI63G1301 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 1.5e-28 129.4 98 64.3
Sed0023332 Sechium edule HOM05D005781 ORTHO05D006835 2.5e-28 128.6 95 62.1
Sed0027756 Sechium edule HOM05D005781 ORTHO05D006835 2.5e-28 128.6 95 62.1
TWI38G0894 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 2.5e-28 128.6 98 64.3
Cfa015971 Carpinus fangiana HOM05D005781 ORTHO05D006835 3.2e-28 128.3 94 66.0
PGR031G1812 Punica granatum HOM05D005781 ORTHO05D006835 3.2e-28 128.3 96 65.6
Sc01g0002510 Simmondsia chinensis HOM05D005781 ORTHO05D006835 3.2e-28 128.3 93 65.6
COL.COLO4_20773 Corchorus olitorius HOM05D005781 ORTHO05D006835 4.2e-28 127.9 98 66.3
ECA247G2075 Erigeron canadensis HOM05D005781 ORTHO05D006835 5.5e-28 127.5 96 63.5
Duzib138G0305 Durio zibethinus HOM05D005781 ORTHO05D006835 7.2e-28 127.1 98 64.3
THA.LOC104825391 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 7.2e-28 127.1 98 62.2
PGSC0003DMG400026192 Solanum tuberosum HOM05D005781 ORTHO05D006835 9.4e-28 126.7 96 62.5
COL.COLO4_33816 Corchorus olitorius HOM05D005781 ORTHO05D006835 1.2e-27 126.3 98 64.3
Lsat_1_v5_gn_9_14361 Lactuca sativa HOM05D005781 ORTHO05D006835 1.2e-27 126.3 97 64.9
Nn6g33491 Nelumbo nucifera HOM05D005781 ORTHO05D006835 1.2e-27 126.3 96 62.5
Rhsim06G0009100 Rhododendron simsii HOM05D005781 ORTHO05D006835 1.2e-27 126.3 97 64.9
Dinv36923 Davidia involucrata HOM05D005781 ORTHO05D006835 2.7e-27 125.2 84 70.2
Nn8g40131 Nelumbo nucifera HOM05D005781 ORTHO05D006835 2.7e-27 125.2 96 61.5
Potri.001G082000 Populus trichocarpa HOM05D005781 ORTHO05D006835 2.7e-27 125.2 98 65.3
Atru.chr1.3778 Acer truncatum HOM05D005781 ORTHO05D006835 3.6e-27 124.8 98 62.2
Migut.H01206 Erythranthe guttata HOM05D005781 ORTHO05D006835 4.7e-27 124.4 96 62.5
Gohir.A08G193000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 4.7e-27 124.4 98 63.3
Rhsim13G0061400 Rhododendron simsii HOM05D005781 ORTHO05D006835 4.7e-27 124.4 97 64.9
Gohir.D07G208300 Gossypium hirsutum HOM05D005781 ORTHO05D006835 6.1e-27 124.0 98 64.3
Prupe.6G320800 Prunus persica HOM05D005781 ORTHO05D006835 6.1e-27 124.0 92 62.0
Ah.04g154640 Amaranthus hybridus HOM05D005781 ORTHO05D006835 1.0e-26 123.2 97 62.9
Gohir.D08G211000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.0e-26 123.2 98 63.3
Gorai.004G223700 Gossypium raimondii HOM05D005781 ORTHO05D006835 1.0e-26 123.2 98 63.3
Gohir.A07G202100 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.4e-26 122.9 98 62.2
MD04G1200700 Malus domestica HOM05D005781 ORTHO05D006835 1.4e-26 122.9 95 60.0
CANSAT54G0055 Cannabis sativa HOM05D005781 ORTHO05D006835 1.8e-26 122.5 96 60.4
Gorai.001G235000 Gossypium raimondii HOM05D005781 ORTHO05D006835 4.0e-26 121.3 98 62.2
MBI09_g43998_MAGBIO Magnolia biondii HOM05D005781 ORTHO05D006835 5.2e-26 120.9 96 62.5
MD12G1213200 Malus domestica HOM05D005781 ORTHO05D006835 5.2e-26 120.9 91 58.2
Nitab4.5_0001134g0180 Nicotiana tabacum HOM05D005781 ORTHO05D006835 1.2e-25 119.8 92 59.8
Aqoxy5G00270 Aquilegia oxysepala HOM05D005781 ORTHO05D006835 1.5e-25 119.4 95 58.9
EL10Ac7g17336 Beta vulgaris HOM05D005781 ORTHO05D006835 1.5e-25 119.4 95 63.2
MELO3C006010.2 Cucumis melo HOM05D005781 ORTHO05D006835 1.5e-25 119.4 104 54.8
CsaV3_3G007920 Cucumis sativus L. HOM05D005781 ORTHO05D006835 1.5e-25 119.4 104 55.8
DCAR_022248 Daucus carota HOM05D005781 ORTHO05D006835 2.6e-25 118.6 94 61.7
CSS0000543 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 4.4e-25 117.9 84 72.6
CSS0033648 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 4.4e-25 117.9 84 72.6
Lj4g0019743 Lotus japonicus HOM05D005781 ORTHO05D006835 5.7e-25 117.5 96 59.4
Lj4g0026259 Lotus japonicus HOM05D005781 ORTHO05D006835 7.5e-25 117.1 96 59.4
Hma1.2p1_0841F.1_g227020 Hydrangea macrophylla HOM05D005781 ORTHO05D006835 2.8e-24 115.2 85 69.4
Peaxi162Scf00007g01414 Petunia axillaris HOM05D005781 ORTHO05D006835 3.7e-24 114.8 84 61.9
CDE02G0151 Ceratophyllum demersum HOM05D005781 ORTHO05D006835 4.8e-24 114.4 96 57.3
Medtr4g115740 Medicago truncatula HOM05D005781 ORTHO05D006835 4.8e-24 114.4 88 61.4
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 6.3e-24 114.0 96 57.3
Nitab4.5_0003429g0070 Nicotiana tabacum HOM05D005781 ORTHO05D006835 6.3e-24 114.0 83 60.2
RcHm_v2.0_Chr3g0455721 Rosa chinensis HOM05D005781 ORTHO05D006835 6.3e-24 114.0 96 57.3
Lj3g0001466 Lotus japonicus HOM05D005781 ORTHO05D006835 1.4e-23 112.8 96 58.3
Zm00001eb109340 Zea mays HOM05D005781 ORTHO05D006835 1.4e-23 112.8 92 59.8
arahy.Tifrunner.gnm1.ann1.EVJW84 Arachis hypogaea HOM05D005781 ORTHO05D006835 1.8e-23 112.5 96 59.4
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.8e-23 112.5 96 56.2
FAN09G0731 Fragaria x ananassa HOM05D005781 ORTHO05D006835 1.8e-23 112.5 96 56.2
Lalb_Chr13g0300501 Lupinus albus HOM05D005781 ORTHO05D006835 2.4e-23 112.1 96 55.2
SalBow1G0716 Salvia bowleyana HOM05D005781 ORTHO05D006835 2.4e-23 112.1 98 56.1
Cpa.g.c32851 Carica papaya HOM05D005781 ORTHO05D006835 3.1e-23 111.7 86 67.4
Glyma.05G129800 Glycine max HOM05D005781 ORTHO05D006835 4.1e-23 111.3 96 58.3
Cfa011814 Carpinus fangiana HOM05D005781 ORTHO05D006835 7.0e-23 110.5 96 60.4
DCAR_003312 Daucus carota HOM05D005781 ORTHO05D006835 7.0e-23 110.5 97 58.8
Glyma.08G084500 Glycine max HOM05D005781 ORTHO05D006835 7.0e-23 110.5 96 57.3
Atru.chr5.698 Acer truncatum HOM05D005781 ORTHO05D006835 2.0e-22 109.0 95 58.9
Nitab4.5_0008807g0010 Nicotiana tabacum HOM05D005781 ORTHO05D006835 2.0e-22 109.0 81 60.5
Haze_00504 Corylus avellana HOM05D005781 ORTHO05D006835 4.5e-22 107.8 84 64.3
Os01g0258600 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 4.5e-22 107.8 96 55.2
Solyc07g052913.1 Solanum lycopersicum HOM05D005781 ORTHO05D006835 4.5e-22 107.8 82 61.0
Ca_21653_v3 Cicer arietinum L. HOM05D005781 ORTHO05D006835 7.7e-22 107.1 96 54.2
Phvul.002G194100 Phaseolus vulgaris HOM05D005781 ORTHO05D006835 7.7e-22 107.1 92 54.3
vmacro02893 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 1.3e-21 106.3 95 57.9
unitig_0.g2200 Utricularia gibba HOM05D005781 ORTHO05D006835 1.7e-21 105.9 91 60.4
THA.LOC104825885 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 3.8e-21 104.8 86 59.3
Psat4g033600 Pisum sativum HOM05D005781 ORTHO05D006835 6.5e-21 104.0 96 52.1
Sabra01G0058900 Salix brachista HOM05D005781 ORTHO05D006835 1.5e-20 102.8 82 63.4
QL04p074672 Quercus lobata HOM05D005781 ORTHO05D006835 1.9e-20 102.4 93 54.8
RcHm_v2.0_Chr1g0322091 Rosa chinensis HOM05D005781 ORTHO05D006835 3.2e-20 101.7 86 54.7
arahy.Tifrunner.gnm1.ann1.V38LZ0 Arachis hypogaea HOM05D005781 ORTHO05D006835 4.0e-18 94.7 132 43.2
Os06g0184100 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 5.2e-18 94.4 84 54.8
vmacro12515 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 5.2e-18 94.4 85 57.6
Atru.chr1.3777 Acer truncatum HOM05D005781 ORTHO05D006835 8.8e-18 93.6 77 59.7
Gorai.009G291400 Gossypium raimondii HOM05D005781 ORTHO05D006835 8.8e-18 93.6 86 55.8
SalBow1G0213 Salvia bowleyana HOM05D005781 ORTHO05D006835 2.0e-17 92.4 83 54.2
Zm00001eb374690 Zea mays HOM05D005781 ORTHO05D006835 3.4e-17 91.7 64 62.5
HanXRQChr08g0228461 Helianthus annuus HOM05D005781 ORTHO05D006835 5.7e-17 90.9 58 70.7
Rhsim06G0009300 Rhododendron simsii HOM05D005781 ORTHO05D006835 5.7e-17 90.9 73 58.9
ATR0626G090 Amborella trichopoda HOM05D005781 ORTHO05D006835 7.5e-17 90.5 82 52.4
Gohir.D05G278050 Gossypium hirsutum HOM05D005781 ORTHO05D006835 7.5e-17 90.5 86 54.7
Medtr5g009535 Medicago truncatula HOM05D005781 ORTHO05D006835 1.3e-16 89.7 77 54.5
Haze_11591 Corylus avellana HOM05D005781 ORTHO05D006835 1.7e-16 89.4 73 61.6
Thhalv10022933m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 1.7e-16 89.4 99 45.5
Sp6g27160 Schrenkiella parvula HOM05D005781 ORTHO05D006835 1.7e-16 89.4 97 45.4
SGA_v2.0_scaffold57G20299 Striga asiatica HOM05D005781 ORTHO05D006835 2.8e-16 88.6 85 52.9
Actinidia11611 Actinidia chinensis HOM05D005781 ORTHO05D006835 8.3e-16 87.0 62 66.1
Thhalv10015111m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 8.3e-16 87.0 99 47.5
CARHR196210 Cardamine hirsuta HOM05D005781 ORTHO05D006835 1.4e-15 86.3 99 45.5
TPR.G40143 Trifolium pratense HOM05D005781 ORTHO05D006835 1.4e-15 86.3 84 50.0
AL6G27950 Arabidopsis lyrata HOM05D005781 ORTHO05D006835 1.8e-15 85.9 99 46.5
Gohir.A05G276166 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.8e-15 85.9 86 51.2
AT5G16950 Arabidopsis thaliana HOM05D005781 ORTHO05D006835 2.4e-15 85.5 94 44.7
BcaB01g05237 Brassica carinata HOM05D005781 ORTHO05D006835 2.4e-15 85.5 64 59.4
C03p09360 Brassica napus HOM05D005781 ORTHO05D006835 2.4e-15 85.5 64 59.4
BolC3t13430H Brassica oleracea HOM05D005781 ORTHO05D006835 2.4e-15 85.5 64 59.4
BcaB07g31735 Brassica carinata HOM05D005781 ORTHO05D006835 4.1e-15 84.7 98 44.9
A03p08090 Brassica napus HOM05D005781 ORTHO05D006835 4.1e-15 84.7 64 59.4
BraA03t10134Z Brassica rapa HOM05D005781 ORTHO05D006835 4.1e-15 84.7 64 59.4
BcaB01g04964 Brassica carinata HOM05D005781 ORTHO05D006835 7.0e-15 84.0 64 57.8
Carub.0006s1516 Capsella rubella HOM05D005781 ORTHO05D006835 1.6e-14 82.8 64 56.2
Aa31LG11G12650 Aethionema arabicum HOM05D005781 ORTHO05D006835 2.0e-14 82.4 102 43.1
VMungo0251G3003 Vigna mungo HOM05D005781 ORTHO05D006835 6.8e-10 67.4 69 47.8
Mapoly0010s0158 Marchantia polymorpha HOM05D005781 ORTHO05D006835 1.5e-09 66.2 57 50.9
A09p11320 Brassica napus HOM05D005781 ORTHO05D006835 7.5e-09 63.9 87 39.1
BraA09t36770Z Brassica rapa HOM05D005781 ORTHO05D006835 7.5e-09 63.9 87 39.1
Pp3c9_710 Physcomitrium patens HOM05D005781 ORTHO05D006835 2.8e-08 62.0 53 47.2
Zm00001eb217150 Zea mays HOM05D000360 ORTHO05D006835 4.9e-08 61.2 52 53.8
CBR_g25869 Chara braunii HOM05D005781 ORTHO05D006835 2.4e-07 58.9 84 38.1
Zm00001eb352440 Zea mays HOM05D000360 ORTHO05D006835 3.1e-07 58.5 52 51.9
BcaC04g22979 Brassica carinata HOM05D005781 ORTHO05D006835 2.7e-06 55.5 49 46.9


User provided reference genes

Program Settings