Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034151.1 Olea europaea HOM05D000499 ORTHO05D006980 3.0e-84 315.1 153 100.0
Oeu031270.1 Olea europaea HOM05D000499 ORTHO05D006980 5.7e-67 257.7 153 79.7
Dinv30743 Davidia involucrata HOM05D000499 ORTHO05D006980 3.0e-60 235.3 151 74.2
Nitab4.5_0009341g0010 Nicotiana tabacum HOM05D000499 ORTHO05D006980 7.0e-57 224.2 150 71.3
Nitab4.5_0000420g0130 Nicotiana tabacum HOM05D000499 ORTHO05D006980 3.5e-56 221.9 150 71.3
CSS0022306 Camellia sinensis var. sinensis HOM05D000499 ORTHO05D006980 2.2e-55 219.2 152 71.1
Haze_05593 Corylus avellana HOM05D000499 ORTHO05D006980 1.5e-54 216.5 151 68.9
Cfa000947 Carpinus fangiana HOM05D000499 ORTHO05D006980 1.9e-54 216.1 150 68.7
Cc09_g03370 Coffea canephora HOM05D000499 ORTHO05D006980 2.5e-54 215.7 144 70.8
Peaxi162Scf01211g00135 Petunia axillaris HOM05D000499 ORTHO05D006980 2.5e-54 215.7 146 69.2
MSTRG.13252 Avicennia marina HOM05D000499 ORTHO05D006980 5.5e-54 214.5 152 65.8
Actinidia39571 Actinidia chinensis HOM05D000499 ORTHO05D006980 7.2e-54 214.2 152 69.7
CiPaw.09G123800 Carya illinoinensis HOM05D000499 ORTHO05D006980 1.2e-53 213.4 149 69.1
Rhsim02G0171100 Rhododendron simsii HOM05D000499 ORTHO05D006980 2.1e-53 212.6 152 71.1
DCAR_027913 Daucus carota HOM05D000499 ORTHO05D006980 4.7e-53 211.5 146 68.5
Migut.C00430 Erythranthe guttata HOM05D000499 ORTHO05D006980 1.4e-52 209.9 153 66.0
GSVIVG01021450001 Vitis vinifera HOM05D000499 ORTHO05D006980 1.4e-52 209.9 152 67.1
QL05p058242 Quercus lobata HOM05D000499 ORTHO05D006980 2.3e-52 209.1 151 65.6
PGSC0003DMG402031505 Solanum tuberosum HOM05D000499 ORTHO05D006980 3.0e-52 208.8 149 67.1
PSO675G0856 Papaver somniferum HOM05D000499 ORTHO05D006980 5.2e-52 208.0 151 64.9
TAR626G0015 Trochodendron aralioides HOM05D000499 ORTHO05D006980 5.2e-52 208.0 152 67.1
Hma1.2p1_0286F.1_g113970 Hydrangea macrophylla HOM05D000499 ORTHO05D006980 2.0e-51 206.1 146 69.2
Sed0009411 Sechium edule HOM05D000499 ORTHO05D006980 2.6e-51 205.7 155 67.1
Actinidia07693 Actinidia chinensis HOM05D000499 ORTHO05D006980 3.4e-51 205.3 152 68.4
TWI73G0839 Tripterygium wilfordii HOM05D000499 ORTHO05D006980 7.5e-51 204.1 153 63.4
MSTRG.16242 Avicennia marina HOM05D000499 ORTHO05D006980 1.3e-50 203.4 152 66.4
CAN.G176.6 Capsicum annuum HOM05D000499 ORTHO05D006980 2.2e-50 202.6 146 64.4
RcHm_v2.0_Chr5g0014101 Rosa chinensis HOM05D000499 ORTHO05D006980 2.2e-50 202.6 151 63.6
Solyc08g016620.3 Solanum lycopersicum HOM05D000499 ORTHO05D006980 2.2e-50 202.6 145 66.9
Manes.17G069800 Manihot esculenta HOM05D000499 ORTHO05D006980 3.7e-50 201.8 152 63.8
Prupe.4G080400 Prunus persica HOM05D000499 ORTHO05D006980 3.7e-50 201.8 151 63.6
MD10G1262300 Malus domestica HOM05D000499 ORTHO05D006980 4.8e-50 201.4 151 62.3
Sopen08g006990 Solanum pennellii HOM05D000499 ORTHO05D006980 1.4e-49 199.9 145 65.5
TWI09G0924 Tripterygium wilfordii HOM05D000499 ORTHO05D006980 1.4e-49 199.9 153 64.1
ClCG01G024610 Citrullus lanatus HOM05D000499 ORTHO05D006980 2.4e-49 199.1 155 63.9
Lalb_Chr15g0086801 Lupinus albus HOM05D000499 ORTHO05D006980 2.4e-49 199.1 153 62.7
Ciclev10018291m.g Citrus clementina HOM05D000499 ORTHO05D006980 7.0e-49 197.6 145 62.8
Lj6g0004000 Lotus japonicus HOM05D000499 ORTHO05D006980 7.0e-49 197.6 153 62.1
MD05G1284000 Malus domestica HOM05D000499 ORTHO05D006980 1.2e-48 196.8 151 62.3
PSO541G2836 Papaver somniferum HOM05D000499 ORTHO05D006980 2.0e-48 196.1 152 62.5
Potri.018G107800 Populus trichocarpa HOM05D000499 ORTHO05D006980 2.0e-48 196.1 152 61.8
FvH4_3g05570 Fragaria vesca HOM05D000499 ORTHO05D006980 3.5e-48 195.3 151 59.6
Lj4g0006097 Lotus japonicus HOM05D000499 ORTHO05D006980 5.9e-48 194.5 153 63.4
PGR042G2003 Punica granatum HOM05D000499 ORTHO05D006980 1.3e-47 193.4 156 62.2
CsaV3_6G051730 Cucumis sativus L. HOM05D000499 ORTHO05D006980 1.7e-47 193.0 155 61.9
Manes.15G121500 Manihot esculenta HOM05D000499 ORTHO05D006980 1.7e-47 193.0 147 60.5
Sabra18G0091700 Salix brachista HOM05D000499 ORTHO05D006980 1.7e-47 193.0 151 61.6
MELO3C007134.2 Cucumis melo HOM05D000499 ORTHO05D006980 3.8e-47 191.8 155 60.6
Duzib235G0289 Durio zibethinus HOM05D000499 ORTHO05D006980 3.8e-47 191.8 153 62.7
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 3.8e-47 191.8 151 58.9
AT5G46220 Arabidopsis thaliana HOM05D000499 ORTHO05D006980 5.0e-47 191.4 155 59.4
Lalb_Chr18g0055441 Lupinus albus HOM05D000499 ORTHO05D006980 5.0e-47 191.4 153 61.4
Duzib192G0858 Durio zibethinus HOM05D000499 ORTHO05D006980 6.5e-47 191.0 153 61.4
Carub.0008s0169 Capsella rubella HOM05D000499 ORTHO05D006980 1.9e-46 189.5 155 56.1
Aa31LG9G6650 Aethionema arabicum HOM05D000499 ORTHO05D006980 2.5e-46 189.1 146 61.0
Nn3g20776 Nelumbo nucifera HOM05D000499 ORTHO05D006980 2.5e-46 189.1 146 61.6
AL8G12240 Arabidopsis lyrata HOM05D000499 ORTHO05D006980 4.2e-46 188.3 155 58.7
Thhalv10000873m.g Eutrema salsugineum HOM05D000499 ORTHO05D006980 4.2e-46 188.3 156 59.0
Glyma.15G094100 Glycine max HOM05D000499 ORTHO05D006980 5.5e-46 188.0 153 60.1
Thecc.06G150900 Theobroma cacao HOM05D000499 ORTHO05D006980 1.2e-45 186.8 153 60.1
TPR.G26666 Trifolium pratense HOM05D000499 ORTHO05D006980 1.2e-45 186.8 153 60.1
C07p29440 Brassica napus HOM05D000499 ORTHO05D006980 1.6e-45 186.4 155 57.4
Medtr2g019450 Medicago truncatula HOM05D000499 ORTHO05D006980 2.1e-45 186.0 153 60.1
Psat1g189080 Pisum sativum HOM05D000499 ORTHO05D006980 2.1e-45 186.0 153 58.8
Aqoxy7G03973 Aquilegia oxysepala HOM05D000499 ORTHO05D006980 2.7e-45 185.7 152 61.8
THA.LOC104827717 Tarenaya hassleriana HOM05D000499 ORTHO05D006980 2.7e-45 185.7 155 58.1
Atru.chr10.1229 Acer truncatum HOM05D000499 ORTHO05D006980 3.6e-45 185.3 153 57.5
BcaC06g31490 Brassica carinata HOM05D000499 ORTHO05D006980 3.6e-45 185.3 155 58.1
A06p46080 Brassica napus HOM05D000499 ORTHO05D006980 8.0e-45 184.1 155 56.8
Gohir.D10G041400 Gossypium hirsutum HOM05D000499 ORTHO05D006980 1.0e-44 183.7 153 60.8
Gorai.011G043700 Gossypium raimondii HOM05D000499 ORTHO05D006980 1.0e-44 183.7 153 60.8
VMungo0540G1569 Vigna mungo HOM05D000499 ORTHO05D006980 1.4e-44 183.3 153 58.2
A02p29780 Brassica napus HOM05D000499 ORTHO05D006980 1.8e-44 183.0 155 56.8
BraA02t08000Z Brassica rapa HOM05D000499 ORTHO05D006980 1.8e-44 183.0 155 56.8
Gohir.A10G040600 Gossypium hirsutum HOM05D000499 ORTHO05D006980 1.8e-44 183.0 153 60.1
CARHR175570 Cardamine hirsuta HOM05D000499 ORTHO05D006980 2.3e-44 182.6 155 56.1
Lsat_1_v5_gn_7_31260 Lactuca sativa HOM05D000499 ORTHO05D006980 2.3e-44 182.6 155 58.7
SalBow8G2947 Salvia bowleyana HOM05D000499 ORTHO05D006980 2.3e-44 182.6 152 59.9
C02p47180 Brassica napus HOM05D000499 ORTHO05D006980 3.0e-44 182.2 155 58.1
BolC2t10762H Brassica oleracea HOM05D000499 ORTHO05D006980 3.0e-44 182.2 155 58.1
Cpa.g.sc166.7 Carica papaya HOM05D000499 ORTHO05D006980 4.0e-44 181.8 155 59.4
Lsat_1_v5_gn_7_28860 Lactuca sativa HOM05D000499 ORTHO05D006980 4.0e-44 181.8 155 60.0
arahy.Tifrunner.gnm1.ann1.DA38EV Arachis hypogaea HOM05D000499 ORTHO05D006980 6.8e-44 181.0 158 59.5
Eucgr.E02395 Eucalyptus grandis HOM05D000499 ORTHO05D006980 6.8e-44 181.0 155 58.7
CANSAT35G0862 Cannabis sativa HOM05D000499 ORTHO05D006980 1.2e-43 180.3 152 61.2
Ciclev10015169m.g Citrus clementina HOM05D000499 ORTHO05D006980 3.4e-43 178.7 148 58.8
BcaC03g16839 Brassica carinata HOM05D000499 ORTHO05D006980 9.8e-43 177.2 155 56.8
Glyma.05G130400 Glycine max HOM05D000499 ORTHO05D006980 1.3e-42 176.8 147 60.5
Phvul.006G164800 Phaseolus vulgaris HOM05D000499 ORTHO05D006980 1.3e-42 176.8 153 56.9
BraA06t27473Z Brassica rapa HOM05D000499 ORTHO05D006980 1.7e-42 176.4 165 53.3
SGA_v2.0_scaffold1G00174 Striga asiatica HOM05D000499 ORTHO05D006980 2.8e-42 175.6 157 59.9
BolC7t43492H Brassica oleracea HOM05D000499 ORTHO05D006980 6.3e-42 174.5 169 52.7
Atru.chr10.1230 Acer truncatum HOM05D000499 ORTHO05D006980 1.1e-41 173.7 162 56.8
HanXRQChr04g0112071 Helianthus annuus HOM05D000499 ORTHO05D006980 2.4e-41 172.6 153 59.5
Sc05g0006190 Simmondsia chinensis HOM05D000499 ORTHO05D006980 1.6e-40 169.9 138 58.7
AUR62029098 Chenopodium quinoa HOM05D000499 ORTHO05D006980 1.0e-39 167.2 145 60.0
TAR624G0324 Trochodendron aralioides HOM05D000499 ORTHO05D006980 3.3e-38 162.2 120 61.7
AUR62015015 Chenopodium quinoa HOM05D000499 ORTHO05D006980 4.3e-38 161.8 145 58.6
SalBow7G2123 Salvia bowleyana HOM05D000499 ORTHO05D006980 2.1e-37 159.5 151 55.0
VMungo0251G0004 Vigna mungo HOM05D000499 ORTHO05D006980 3.6e-37 158.7 140 57.1
Ah.01g013750 Amaranthus hybridus HOM05D000499 ORTHO05D006980 8.9e-36 154.1 144 55.6
Phvul.002G193500 Phaseolus vulgaris HOM05D000499 ORTHO05D006980 1.2e-35 153.7 140 56.4
EL10Ac9g22688 Beta vulgaris HOM05D000499 ORTHO05D006980 4.9e-34 148.3 145 52.4
HPP92_024038 Vanilla planifolia HOM05D000499 ORTHO05D006980 3.5e-32 142.1 150 46.7
vmacro10946 Vaccinium macrocarpon HOM05D000499 ORTHO05D006980 1.5e-30 136.7 100 63.0
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 5.8e-27 124.8 102 51.0
ATR1091G084 Amborella trichopoda HOM05D000499 ORTHO05D006980 7.5e-27 124.4 142 49.3
FAN25G3270 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.7e-26 123.2 110 50.0
SGA_v2.0_scaffold333G48992 Striga asiatica HOM05D000499 ORTHO05D006980 9.2e-25 117.5 85 67.1
ECA236G0426 Erigeron canadensis HOM05D000499 ORTHO05D006980 4.6e-24 115.2 111 51.4
Zm00001eb120220 Zea mays HOM05D000499 ORTHO05D006980 6.0e-24 114.8 148 40.5
Os01g0210400 Oryza sativa ssp. japonica HOM05D000499 ORTHO05D006980 6.6e-23 111.3 169 39.6
MBI07_g37166_MAGBIO Magnolia biondii HOM05D000499 ORTHO05D006980 1.4e-17 93.6 146 41.1
Lj1A1187G43 Lonicera japonica HOM05D000499 ORTHO05D006980 3.5e-16 89.0 66 59.1
Ca_00542_v3 Cicer arietinum L. HOM05D000499 ORTHO05D006980 9.2e-09 64.3 43 62.8
unitig_578.g16132 Utricularia gibba HOM05D000499 ORTHO05D006980 2.5e-06 56.2 39 56.4


User provided reference genes

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