Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 2.2e-90 335.5 159 100.0
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 1.4e-68 263.1 180 73.9
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 1.0e-58 230.3 167 70.1
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 3.6e-48 195.3 179 60.3
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 8.1e-40 167.5 176 52.3
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 3.4e-38 162.2 176 52.3
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 6.4e-37 157.9 177 49.2
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 8.6e-34 147.5 180 48.9
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 4.3e-33 145.2 189 47.1
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 6.2e-32 141.4 158 49.4
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 1.4e-31 140.2 183 45.9
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 6.8e-31 137.9 182 44.0
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 8.9e-31 137.5 169 49.1
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 5.8e-30 134.8 182 50.0
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 2.9e-29 132.5 184 44.6
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 3.7e-29 132.1 191 42.9
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 6.4e-29 131.3 191 42.4
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.1e-28 130.6 155 49.0
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 1.1e-28 130.6 168 46.4
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 3.2e-28 129.0 191 42.4
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 7.8e-27 124.4 193 44.0
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.3e-26 123.6 162 51.2
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 5.1e-26 121.7 186 41.4
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 5.1e-26 121.7 186 41.4
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 5.1e-26 121.7 162 50.6
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 6.6e-26 121.3 183 41.5
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 8.6e-26 120.9 189 40.7
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 8.6e-26 120.9 189 40.7
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 1.1e-25 120.6 193 45.1
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 1.5e-25 120.2 175 45.7
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 3.3e-25 119.0 196 42.9
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 3.3e-25 119.0 189 40.2
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 4.3e-25 118.6 185 40.5
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.6e-24 116.7 183 45.9
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.6e-24 115.5 162 46.3
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 6.2e-24 114.8 183 45.9
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 6.2e-24 114.8 184 40.2
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 8.1e-24 114.4 183 45.9
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 1.1e-23 114.0 187 40.1
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 1.4e-23 113.6 190 44.2
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.8e-23 113.2 186 39.2
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 1.8e-23 113.2 185 41.1
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 3.1e-23 112.5 189 39.7
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 4.0e-23 112.1 172 43.6
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 5.2e-23 111.7 182 42.9
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 5.2e-23 111.7 181 42.0
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 6.8e-23 111.3 182 41.8
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.2e-22 110.5 186 38.2
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 1.2e-22 110.5 190 39.5
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 1.2e-22 110.5 189 39.7
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 1.5e-22 110.2 181 40.9
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 1.5e-22 110.2 190 43.2
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 2.6e-22 109.4 181 40.9
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 4.4e-22 108.6 185 42.7
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 7.6e-22 107.8 164 45.1
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 2.2e-21 106.3 182 39.6
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 2.2e-21 106.3 195 39.0
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 2.2e-21 106.3 189 39.2
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 2.9e-21 105.9 187 40.6
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 2.9e-21 105.9 184 39.1
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 2.9e-21 105.9 181 41.4
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 2.9e-21 105.9 194 40.2
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 2.9e-21 105.9 141 46.8
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 3.8e-21 105.5 171 45.0
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 4.9e-21 105.1 186 40.9
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 6.4e-21 104.8 179 40.8
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 8.4e-21 104.4 157 40.1
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 8.4e-21 104.4 181 39.2
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 8.4e-21 104.4 176 39.2
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 1.1e-20 104.0 186 41.4
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 2.4e-20 102.8 171 43.3
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 7.1e-20 101.3 195 39.5
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 9.3e-20 100.9 190 39.5
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 1.2e-19 100.5 198 35.4
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 1.2e-19 100.5 184 39.1
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 1.6e-19 100.1 166 41.6
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 1.6e-19 100.1 179 40.2
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 2.1e-19 99.8 177 41.2
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 3.5e-19 99.0 195 39.5
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 4.6e-19 98.6 197 39.1
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 6.0e-19 98.2 185 40.0
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 6.0e-19 98.2 172 42.4
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 1.3e-18 97.1 163 41.1
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 1.3e-18 97.1 193 38.9
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.7e-18 96.7 189 40.2
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 1.7e-18 96.7 171 40.4
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 2.3e-18 96.3 163 41.1
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 3.0e-18 95.9 166 41.0
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 3.0e-18 95.9 168 40.5
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 3.9e-18 95.5 179 39.7
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 5.1e-18 95.1 156 39.1
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 5.1e-18 95.1 193 36.8
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 8.7e-18 94.4 170 39.4
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 1.1e-17 94.0 171 38.6
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 1.5e-17 93.6 176 38.6
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.5e-17 92.8 185 38.9
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 3.3e-17 92.4 183 37.2
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 3.3e-17 92.4 183 37.2
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 3.3e-17 92.4 187 37.4
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 4.3e-17 92.0 182 40.7
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 4.3e-17 92.0 170 41.2
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 5.6e-17 91.7 159 37.7
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 5.6e-17 91.7 159 37.7
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 5.6e-17 91.7 169 40.8
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 7.3e-17 91.3 179 40.2
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 7.3e-17 91.3 192 39.1
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 9.6e-17 90.9 161 39.8
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 1.3e-16 90.5 166 38.6
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 2.1e-16 89.7 189 38.1
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 2.8e-16 89.4 139 43.2
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 2.8e-16 89.4 178 36.5
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 3.6e-16 89.0 193 35.8
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 3.6e-16 89.0 159 38.4
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 6.2e-16 88.2 183 36.6
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 8.1e-16 87.8 181 39.2
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.1e-15 87.4 181 37.6
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 1.4e-15 87.0 174 37.9
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.4e-15 87.0 183 37.2
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 6.9e-15 84.7 185 35.7
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 6.9e-15 84.7 171 36.8
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 1.5e-14 83.6 200 36.5
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 2.0e-14 83.2 180 34.4
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 2.0e-14 83.2 150 39.3
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 2.0e-14 83.2 154 38.3
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 2.6e-14 82.8 141 39.0
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 3.4e-14 82.4 126 41.3
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 3.4e-14 82.4 187 37.4
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 4.4e-14 82.0 190 35.3
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 5.8e-14 81.6 167 37.7
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 3.8e-13 79.0 181 34.3
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 6.4e-13 78.2 167 38.9
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 1.4e-12 77.0 126 39.7
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 2.4e-12 76.3 182 33.0
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 7.1e-12 74.7 181 34.3
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 7.1e-12 74.7 181 32.6
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 9.3e-12 74.3 173 36.4
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 1.2e-11 73.9 181 34.3
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 1.2e-11 73.9 145 36.6
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.6e-11 73.6 141 36.9
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 1.7e-10 70.1 159 36.5
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 2.3e-10 69.7 181 32.6
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 3.0e-10 69.3 186 34.9
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 6.6e-10 68.2 59 57.6
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.9e-09 66.6 81 53.1
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 2.5e-09 66.2 164 37.2
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 3.3e-09 65.9 155 34.2
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 4.3e-09 65.5 163 35.6
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 5.6e-09 65.1 158 34.8
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 9.6e-09 64.3 68 51.5
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 1.3e-08 63.9 159 34.0
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 3.6e-08 62.4 61 52.5
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 6.2e-08 61.6 108 39.8
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 1.4e-07 60.5 108 39.8
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 6.9e-07 58.2 213 26.8
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 1.2e-06 57.4 146 36.3
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 2.0e-06 56.6 58 51.7


User provided reference genes

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