Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033792.2 Olea europaea HOM05D007867 ORTHO05D009953 1.3e-128 463.0 225 100.0
FAN28G0366 Fragaria x ananassa HOM05D007867 ORTHO05D009953 1.2e-12 77.8 45 86.7
CSS0005733 Camellia sinensis var. sinensis HOM05D007867 ORTHO05D009953 1.6e-12 77.4 59 62.7
Thecc.01G083600 Theobroma cacao HOM05D007867 ORTHO05D009953 2.0e-12 77.0 38 92.1
Nn1g05680 Nelumbo nucifera HOM05D007867 ORTHO05D009953 4.5e-12 75.9 38 89.5
Sed0014306 Sechium edule HOM05D007867 ORTHO05D009953 1.7e-11 73.9 43 83.7
vmacro19595 Vaccinium macrocarpon HOM05D007867 ORTHO05D009953 1.7e-11 73.9 40 87.5
Actinidia36378 Actinidia chinensis HOM05D007867 ORTHO05D009953 8.5e-11 71.6 40 85.0
FvH4_1g18950 Fragaria vesca HOM05D007867 ORTHO05D009953 8.5e-11 71.6 43 86.0
RcHm_v2.0_Chr2g0109971 Rosa chinensis HOM05D007867 ORTHO05D009953 1.1e-10 71.2 41 87.8
Dinv36978 Davidia involucrata HOM05D007867 ORTHO05D009953 1.5e-10 70.9 41 82.9
Zm00001eb061250 Zea mays HOM05D007867 ORTHO05D009953 1.9e-10 70.5 42 81.0
DCAR_021457 Daucus carota HOM05D000419 ORTHO05D000692 4.2e-10 69.3 43 79.1
ATR0800G156 Amborella trichopoda HOM05D007867 ORTHO05D009953 5.5e-10 68.9 38 86.8
MD10G1057100 Malus domestica HOM05D007867 ORTHO05D009953 5.5e-10 68.9 40 90.0
Cc02_g20570 Coffea canephora HOM05D007867 ORTHO05D009953 7.2e-10 68.6 45 75.6
Lalb_Chr09g0325761 Lupinus albus HOM05D007867 ORTHO05D009953 7.2e-10 68.6 40 82.5
CiPaw.05G026800 Carya illinoinensis HOM05D007867 ORTHO05D009953 1.2e-09 67.8 44 77.3
Gohir.A11G209001 Gossypium hirsutum HOM05D007867 ORTHO05D009953 1.2e-09 67.8 38 78.9
Sc03g0000590 Simmondsia chinensis HOM05D007867 ORTHO05D009953 1.2e-09 67.8 43 76.7
CiPaw.08G145800 Carya illinoinensis HOM05D007867 ORTHO05D009953 2.1e-09 67.0 39 84.6
Hund00401 Selenicereus undatus HOM05D007867 ORTHO05D009953 4.0e-08 62.8 49 67.3
CiPaw.07G042200 Carya illinoinensis HOM05D007867 ORTHO05D009953 6.7e-08 62.0 38 76.3
Gohir.D03G034400 Gossypium hirsutum HOM05D007867 ORTHO05D009953 6.7e-08 62.0 38 76.3
Gorai.003G036100 Gossypium raimondii HOM05D007867 ORTHO05D009953 6.7e-08 62.0 38 76.3
Manes.13G104200 Manihot esculenta HOM05D007867 ORTHO05D009953 6.7e-08 62.0 38 76.3
Nn5g29770 Nelumbo nucifera HOM05D007867 ORTHO05D009953 6.7e-08 62.0 38 76.3
GSVIVG01006775001 Vitis vinifera HOM05D007867 ORTHO05D009953 6.7e-08 62.0 38 76.3
Cc07_g07830 Coffea canephora HOM05D007867 ORTHO05D009953 2.6e-07 60.1 45 66.7
FAN23G2231 Fragaria x ananassa HOM05D007867 ORTHO05D009953 2.6e-07 60.1 76 48.7
Gohir.D11G214500 Gossypium hirsutum HOM05D007867 ORTHO05D009953 3.3e-07 59.7 38 78.9
CiPaw.08G128500 Carya illinoinensis HOM05D007867 ORTHO05D009953 4.4e-07 59.3 41 73.2
Lalb_Chr16g0383101 Lupinus albus HOM05D007867 ORTHO05D009953 5.7e-07 58.9 39 82.1
RhsimUnG0066800 Rhododendron simsii HOM05D007867 ORTHO05D009953 5.7e-07 58.9 51 60.8
Peaxi162Scf00943g00415 Petunia axillaris HOM05D007867 ORTHO05D009953 9.7e-07 58.2 44 65.9
TPR.G40500 Trifolium pratense HOM05D007867 ORTHO05D009953 2.2e-06 57.0 26 96.2
CiPaw.08G145600 Carya illinoinensis HOM05D007867 ORTHO05D009953 4.8e-06 55.8 42 73.8
Hma1.2p1_0908F.1_g235690 Hydrangea macrophylla HOM05D007867 ORTHO05D009953 4.8e-06 55.8 42 64.3
Ca_13472_v3 Cicer arietinum L. HOM05D007867 ORTHO05D009953 8.2e-06 55.1 40 67.5


User provided reference genes

Program Settings