Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.0e-178 629.0 326 100.0
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 9.3e-75 284.6 593 37.8
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 7.9e-58 228.4 591 33.5
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 8.7e-57 224.9 488 36.1
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 9.6e-56 221.5 576 32.6
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.3e-55 221.1 593 32.7
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 2.1e-55 220.3 585 32.5
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 3.1e-54 216.5 582 33.2
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 5.3e-54 215.7 595 32.1
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 6.9e-54 215.3 577 32.1
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 2.0e-53 213.8 211 57.3
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 3.4e-53 213.0 209 59.3
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.3e-52 211.1 575 31.7
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.3e-52 211.1 211 56.4
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.3e-52 211.1 592 31.8
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 2.9e-52 209.9 203 59.1
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 4.9e-52 209.1 201 59.7
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 6.5e-52 208.8 193 60.6
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 6.5e-52 208.8 578 32.4
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 6.5e-52 208.8 193 59.6
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 2.5e-51 206.8 202 58.9
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 2.5e-51 206.8 204 57.4
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 2.5e-51 206.8 190 63.2
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 2.5e-51 206.8 211 55.0
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.2e-51 206.5 175 65.7
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.2e-51 206.5 205 59.5
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.2e-51 206.1 175 65.7
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.5e-51 205.7 175 65.7
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.2e-50 204.5 211 55.0
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.6e-50 204.1 593 30.7
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 2.1e-50 203.8 214 54.2
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 2.7e-50 203.4 237 51.9
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 3.5e-50 203.0 211 54.5
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.5e-50 203.0 210 57.1
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 6.0e-50 202.2 205 56.1
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 6.0e-50 202.2 192 59.4
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 6.0e-50 202.2 202 57.4
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 7.9e-50 201.8 175 64.6
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.9e-50 201.8 175 64.6
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.9e-50 201.8 175 64.6
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 7.9e-50 201.8 175 64.6
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.0e-49 201.4 189 60.3
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 1.0e-49 201.4 257 49.8
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.3e-49 201.1 176 63.6
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.3e-49 201.1 214 55.1
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.3e-49 201.1 252 48.4
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.8e-49 200.7 222 54.5
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 2.3e-49 200.3 211 54.0
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 2.3e-49 200.3 204 56.4
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 3.0e-49 199.9 209 56.0
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 3.0e-49 199.9 205 56.6
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.0e-49 199.9 193 60.6
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 3.0e-49 199.9 203 57.6
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 3.9e-49 199.5 170 65.9
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 5.1e-49 199.1 313 43.5
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 6.7e-49 198.7 233 52.4
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 6.7e-49 198.7 214 54.2
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 6.7e-49 198.7 193 57.5
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 8.7e-49 198.4 176 63.1
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.1e-48 198.0 223 54.3
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.1e-48 198.0 198 57.1
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 1.1e-48 198.0 206 54.9
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 1.5e-48 197.6 193 57.0
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.5e-48 196.8 193 57.0
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 2.5e-48 196.8 173 62.4
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 2.2e-47 193.7 195 57.9
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 3.7e-47 193.0 174 63.2
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 8.2e-47 191.8 193 56.0
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 8.2e-47 191.8 174 63.2
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 8.2e-47 191.8 192 57.3
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 8.2e-47 191.8 176 61.9
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.4e-46 191.0 205 52.7
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 2.4e-46 190.3 266 47.4
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.4e-46 190.3 189 57.7
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 3.1e-46 189.9 208 52.9
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 6.9e-46 188.7 214 53.3
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.5e-45 187.6 212 50.9
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 2.6e-45 186.8 177 60.5
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 2.6e-45 186.8 177 60.5
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 5.9e-45 185.7 208 51.4
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 5.9e-45 185.7 214 50.0
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 5.9e-45 185.7 213 51.6
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.7e-44 184.1 193 53.4
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.7e-44 184.1 193 53.9
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 3.8e-44 183.0 193 52.3
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 5.0e-44 182.6 176 59.1
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 5.0e-44 182.6 224 50.0
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 8.5e-44 181.8 193 52.8
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 8.5e-44 181.8 193 52.8
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 8.5e-44 181.8 193 52.8
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 8.5e-44 181.8 193 52.8
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 8.5e-44 181.8 193 52.8
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 8.5e-44 181.8 218 49.1
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 1.1e-43 181.4 193 51.8
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 2.5e-43 180.3 193 52.8
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 1.4e-41 174.5 207 49.3
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 3.7e-39 166.4 178 55.6
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 6.3e-39 165.6 208 48.6
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.4e-38 163.7 167 55.7
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 3.8e-36 156.4 152 59.2
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 3.4e-29 133.3 142 57.0
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.8e-25 120.9 174 48.9
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 2.0e-24 117.5 194 36.6
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 7.4e-24 115.5 188 39.9
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.8e-22 110.9 173 39.3
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 3.1e-22 110.2 185 38.4
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.1e-19 101.7 323 29.7
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 7.2e-19 99.0 137 44.5
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 5.2e-17 92.8 99 51.5
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 4.8e-15 86.3 175 33.7
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 3.8e-12 76.6 54 74.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.6e-10 70.1 115 40.9
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 1.4e-09 68.2 115 39.1
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.8e-09 67.8 115 39.1
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 1.7e-07 61.2 115 35.7


User provided reference genes

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