Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033708.1 Olea europaea HOM05D000138 ORTHO05D290120 2.6e-59 231.9 120 100.0
Oeu053654.1 Olea europaea HOM05D000138 ORTHO05D000078 2.6e-38 162.2 144 67.4
Potri.005G148400 Populus trichocarpa HOM05D000138 ORTHO05D000078 3.7e-21 105.1 140 53.6
Sabra05G0117400 Salix brachista HOM05D000138 ORTHO05D000078 5.9e-19 97.8 140 50.7
CSS0002128 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 1.7e-18 96.3 118 54.2
Prupe.1G418600 Prunus persica HOM05D000138 ORTHO05D000078 2.9e-18 95.5 143 46.9
Duzib116G0358 Durio zibethinus HOM05D000138 ORTHO05D000078 3.8e-18 95.1 140 45.7
Thecc.08G084000 Theobroma cacao HOM05D000138 ORTHO05D000078 5.0e-18 94.7 138 46.4
Haze_22378 Corylus avellana HOM05D000138 ORTHO05D000078 1.9e-17 92.8 108 51.9
MD08G1077100 Malus domestica HOM05D000138 ORTHO05D000078 3.2e-17 92.0 141 46.8
Dinv44927 Davidia involucrata HOM05D000138 ORTHO05D000078 7.2e-17 90.9 142 50.0
Cfa013732 Carpinus fangiana HOM05D000138 ORTHO05D000078 1.6e-16 89.7 108 50.9
CiPaw.07G171600 Carya illinoinensis HOM05D000138 ORTHO05D000078 2.1e-16 89.4 140 47.1
Potri.002G114800 Populus trichocarpa HOM05D000138 ORTHO05D000078 3.6e-16 88.6 139 48.2
MD15G1064600 Malus domestica HOM05D000138 ORTHO05D000078 4.7e-16 88.2 142 45.1
Cc10_g07690 Coffea canephora HOM05D000138 ORTHO05D000078 6.1e-16 87.8 137 45.3
COL.COLO4_28455 Corchorus olitorius HOM05D000138 ORTHO05D000078 6.1e-16 87.8 139 46.0
RcHm_v2.0_Chr6g0310091 Rosa chinensis HOM05D000138 ORTHO05D000078 1.0e-15 87.0 145 44.1
Sabra02G0090800 Salix brachista HOM05D000138 ORTHO05D000078 5.2e-15 84.7 138 47.1
FvH4_2g32640 Fragaria vesca HOM05D000138 ORTHO05D000078 8.8e-15 84.0 145 44.8
FAN24G3384 Fragaria x ananassa HOM05D000138 ORTHO05D000078 8.8e-15 84.0 145 44.8
FAN20G2957 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.5e-14 83.2 145 44.8
Nitab4.5_0009818g0010 Nicotiana tabacum HOM05D000138 ORTHO05D000078 1.5e-14 83.2 99 51.5
Duzib093G0161 Durio zibethinus HOM05D000138 ORTHO05D000078 2.0e-14 82.8 140 43.6
Duzib041G0712 Durio zibethinus HOM05D000138 ORTHO05D000078 2.6e-14 82.4 129 45.7
FAN15G2787 Fragaria x ananassa HOM05D000138 ORTHO05D000078 4.4e-14 81.6 145 44.1
Atru.chr13.875 Acer truncatum HOM05D000138 ORTHO05D000078 7.5e-14 80.9 148 44.6
Phvul.001G031200 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 7.5e-14 80.9 131 44.3
Peaxi162Scf01161g00121 Petunia axillaris HOM05D000138 ORTHO05D000078 9.8e-14 80.5 139 45.3
Nitab4.5_0001494g0060 Nicotiana tabacum HOM05D000138 ORTHO05D000078 1.3e-13 80.1 99 50.5
VMungo0647G1302 Vigna mungo HOM05D000138 ORTHO05D000078 1.7e-13 79.7 119 47.1
Lalb_Chr11g0063041 Lupinus albus HOM05D000138 ORTHO05D000078 4.8e-13 78.2 132 41.7
Manes.05G184000 Manihot esculenta HOM05D000138 ORTHO05D000078 6.3e-13 77.8 138 43.5
CAN.G1559.1 Capsicum annuum HOM05D000138 ORTHO05D000078 1.1e-12 77.0 134 45.5
Glyma.14G089200 Glycine max HOM05D000138 ORTHO05D000078 1.1e-12 77.0 129 44.2
FAN27G0712 Fragaria x ananassa HOM05D000138 ORTHO05D000078 3.1e-12 75.5 146 43.2
Gohir.D06G023600 Gossypium hirsutum HOM05D000138 ORTHO05D000078 3.1e-12 75.5 139 41.7
Gorai.010G028100 Gossypium raimondii HOM05D000138 ORTHO05D000078 3.1e-12 75.5 139 41.7
CiPaw.08G052700 Carya illinoinensis HOM05D000138 ORTHO05D000078 4.1e-12 75.1 139 46.8
Lalb_Chr23g0267641 Lupinus albus HOM05D000138 ORTHO05D000078 4.1e-12 75.1 141 40.4
MSTRG.25020 Avicennia marina HOM05D000138 ORTHO05D000078 5.4e-12 74.7 129 43.4
Manes.18G050000 Manihot esculenta HOM05D000138 ORTHO05D000078 9.1e-12 73.9 114 46.5
Glyma.06G049200 Glycine max HOM05D000138 ORTHO05D000078 1.2e-11 73.6 154 39.6
Cpa.g.sc160.33 Carica papaya HOM05D000138 ORTHO05D000078 1.6e-11 73.2 139 41.0
ClCG08G016720 Citrullus lanatus HOM05D000138 ORTHO05D000078 2.0e-11 72.8 147 43.5
Glyma.17G232290 Glycine max HOM05D000138 ORTHO05D000078 2.0e-11 72.8 124 42.7
Nn6g34524 Nelumbo nucifera HOM05D000138 ORTHO05D000078 2.0e-11 72.8 138 40.6
Actinidia10225 Actinidia chinensis HOM05D000138 ORTHO05D000078 3.5e-11 72.0 125 44.8
Ca_15887_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 3.5e-11 72.0 129 43.4
PGSC0003DMG400004921 Solanum tuberosum HOM05D000138 ORTHO05D000078 5.9e-11 71.2 139 45.3
Aqoxy6G02447 Aquilegia oxysepala HOM05D000138 ORTHO05D000078 7.7e-11 70.9 137 42.3
Gohir.A06G026300 Gossypium hirsutum HOM05D000138 ORTHO05D000078 7.7e-11 70.9 139 40.3
Hma1.2p1_1678F.1_g297080 Hydrangea macrophylla HOM05D000138 ORTHO05D000078 7.7e-11 70.9 131 45.0
Lj4A752T18 Lonicera japonica HOM05D000138 ORTHO05D000078 1.0e-10 70.5 127 40.2
Medtr3g103460 Medicago truncatula HOM05D000138 ORTHO05D000078 1.0e-10 70.5 129 41.9
Oeu022008.1 Olea europaea HOM05D000138 ORTHO05D000078 1.0e-10 70.5 126 43.7
TAR376G0008 Trochodendron aralioides HOM05D000138 ORTHO05D000078 1.0e-10 70.5 138 42.0
VMungo1309G0528 Vigna mungo HOM05D000138 ORTHO05D000078 1.0e-10 70.5 138 44.2
Lj1g0019882 Lotus japonicus HOM05D000138 ORTHO05D000078 1.3e-10 70.1 134 41.0
MBI16_g32076_MAGBIO Magnolia biondii HOM05D000138 ORTHO05D000078 1.3e-10 70.1 129 42.6
Phvul.009G074300 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 1.3e-10 70.1 135 43.7
Glyma.04G047900 Glycine max HOM05D000138 ORTHO05D000078 1.7e-10 69.7 143 40.6
CsaV3_2G025900 Cucumis sativus L. HOM05D000138 ORTHO05D000078 3.8e-10 68.6 154 40.9
TWI12G1460 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 3.8e-10 68.6 140 41.4
Actinidia19292 Actinidia chinensis HOM05D000138 ORTHO05D000078 5.0e-10 68.2 131 45.0
DCAR_020067 Daucus carota HOM05D000138 ORTHO05D000078 5.0e-10 68.2 101 44.6
Lalb_Chr22g0355821 Lupinus albus HOM05D000138 ORTHO05D000078 5.0e-10 68.2 129 41.1
Nn5g30670 Nelumbo nucifera HOM05D000138 ORTHO05D000078 8.6e-10 67.4 142 38.0
MELO3C010784.2 Cucumis melo HOM05D000138 ORTHO05D000078 1.5e-09 66.6 153 40.5
Eucgr.F02223 Eucalyptus grandis HOM05D000138 ORTHO05D000078 1.5e-09 66.6 110 40.9
Lj5g0008412 Lotus japonicus HOM05D000138 ORTHO05D000078 1.5e-09 66.6 108 45.4
Solyc04g077490.3 Solanum lycopersicum HOM05D000138 ORTHO05D000078 1.9e-09 66.2 140 44.3
MSTRG.22206 Avicennia marina HOM05D000138 ORTHO05D000078 2.5e-09 65.9 129 42.6
DCAR_020068 Daucus carota HOM05D000138 ORTHO05D000078 2.5e-09 65.9 101 43.6
TPR.G30206 Trifolium pratense HOM05D000138 ORTHO05D000078 2.5e-09 65.9 121 42.1
Lj4A75G34 Lonicera japonica HOM05D000138 ORTHO05D000078 4.2e-09 65.1 122 41.0
Sed0011253 Sechium edule HOM05D000138 ORTHO05D000078 4.2e-09 65.1 108 43.5
TPR.G13083 Trifolium pratense HOM05D000138 ORTHO05D000078 7.2e-09 64.3 116 41.4
Sopen04g031090 Solanum pennellii HOM05D000138 ORTHO05D000078 9.5e-09 63.9 140 43.6
Glyma.01G195900 Glycine max HOM05D000138 ORTHO05D000078 1.2e-08 63.5 88 48.9
MBI16_g06072_MAGBIO Magnolia biondii HOM05D000138 ORTHO05D000078 1.6e-08 63.2 137 40.9
Ca_06982_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 2.8e-08 62.4 116 44.0
TAR628G1427 Trochodendron aralioides HOM05D000138 ORTHO05D000078 6.1e-08 61.2 138 40.6
VMungo1215G2344 Vigna mungo HOM05D000138 ORTHO05D000078 6.1e-08 61.2 105 44.8
Glyma.11G045800 Glycine max HOM05D000138 ORTHO05D000078 1.0e-07 60.5 133 37.6
TWI36G0342 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 1.0e-07 60.5 144 39.6
Phvul.002G009100 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 1.4e-07 60.1 87 44.8
Psat5g043760 Pisum sativum HOM05D000138 ORTHO05D000078 1.4e-07 60.1 136 36.8
Hund05273 Selenicereus undatus HOM05D000138 ORTHO05D000078 2.3e-07 59.3 121 40.5
Sabra07G0005700 Salix brachista HOM05D000138 ORTHO05D000078 3.0e-07 58.9 115 35.7
TWI56G0187 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 5.2e-07 58.2 144 40.3
DCAR_012824 Daucus carota HOM05D000138 ORTHO05D000078 6.8e-07 57.8 123 40.7
PSO170G4756 Papaver somniferum HOM05D000138 ORTHO05D000078 6.8e-07 57.8 124 36.3
Dinv26961 Davidia involucrata HOM05D000138 ORTHO05D000078 8.9e-07 57.4 131 39.7
Gorai.008G086000 Gossypium raimondii HOM05D000138 ORTHO05D000078 8.9e-07 57.4 132 35.6
Manes.12G117800 Manihot esculenta HOM05D000138 ORTHO05D000078 8.9e-07 57.4 134 42.5
PSO017G0015 Papaver somniferum HOM05D000138 ORTHO05D000078 8.9e-07 57.4 124 37.1
Rhsim07G0217000 Rhododendron simsii HOM05D000138 ORTHO05D000078 8.9e-07 57.4 111 42.3
Potri.007G007400 Populus trichocarpa HOM05D000138 ORTHO05D000078 1.5e-06 56.6 136 34.6
Thecc.01G076700 Theobroma cacao HOM05D000138 ORTHO05D000078 2.0e-06 56.2 133 36.8
TAR381G0918 Trochodendron aralioides HOM05D000138 ORTHO05D000078 2.6e-06 55.8 136 33.1
COL.COLO4_11619 Corchorus olitorius HOM05D000138 ORTHO05D000078 3.4e-06 55.5 137 39.4
Cfa004390 Carpinus fangiana HOM05D000138 ORTHO05D000078 4.4e-06 55.1 132 36.4
Glyma.17G158300 Glycine max HOM05D000138 ORTHO05D000078 4.4e-06 55.1 133 37.6
Psat6g017000 Pisum sativum HOM05D000138 ORTHO05D000078 4.4e-06 55.1 106 41.5
Aqoxy5G00813 Aquilegia oxysepala HOM05D000138 ORTHO05D000078 7.5e-06 54.3 133 39.1
Glyma.05G108600 Glycine max HOM05D000138 ORTHO05D000078 7.5e-06 54.3 130 35.4
Lalb_Chr14g0368041 Lupinus albus HOM05D000138 ORTHO05D000078 7.5e-06 54.3 122 38.5
PGR031G0323 Punica granatum HOM05D000138 ORTHO05D000078 7.5e-06 54.3 139 38.1
QL06p038836 Quercus lobata HOM05D000138 ORTHO05D000078 7.5e-06 54.3 129 38.0
QL04p074587 Quercus lobata HOM05D000138 ORTHO05D000078 9.8e-06 53.9 129 38.0
Sed0003498 Sechium edule HOM05D000138 ORTHO05D000078 9.8e-06 53.9 78 46.2


User provided reference genes

Program Settings