Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033645.1 Olea europaea HOM05D005677 ORTHO05D006966 1.8e-102 375.9 188 100.0
Oeu041446.1 Olea europaea HOM05D005677 ORTHO05D006966 1.6e-71 273.1 182 79.7
Oeu042263.1 Olea europaea HOM05D005677 ORTHO05D006966 3.5e-66 255.4 255 58.4
Oeu009414.1 Olea europaea HOM05D005677 ORTHO05D006966 4.4e-53 211.8 103 99.0
Solyc02g085210.1 Solanum lycopersicum HOM05D005677 ORTHO05D006966 1.5e-48 196.8 177 58.2
Nitab4.5_0001385g0030 Nicotiana tabacum HOM05D005677 ORTHO05D006966 1.9e-48 196.4 176 58.5
PGSC0003DMG400003597 Solanum tuberosum HOM05D005677 ORTHO05D006966 1.9e-48 196.4 177 57.6
Sopen02g029910 Solanum pennellii HOM05D005677 ORTHO05D006966 7.3e-48 194.5 177 57.6
Nitab4.5_0000178g0070 Nicotiana tabacum HOM05D005677 ORTHO05D006966 2.8e-47 192.6 176 58.0
Peaxi162Scf00366g10014 Petunia axillaris HOM05D005677 ORTHO05D006966 2.3e-46 189.5 176 56.2
Lj2P453T29 Lonicera japonica HOM05D005677 ORTHO05D006966 5.2e-46 188.3 160 60.6
CAN.G358.85 Capsicum annuum HOM05D005677 ORTHO05D006966 8.9e-46 187.6 178 56.7
Migut.H00989 Erythranthe guttata HOM05D005677 ORTHO05D006966 1.3e-44 183.7 177 55.9
CSS0028163 Camellia sinensis var. sinensis HOM05D005677 ORTHO05D006966 1.4e-43 180.3 176 55.1
Cc06_g21220 Coffea canephora HOM05D005677 ORTHO05D006966 1.4e-43 180.3 180 55.0
Migut.L00520 Erythranthe guttata HOM05D005677 ORTHO05D006966 5.4e-43 178.3 177 56.5
Gorai.003G015000 Gossypium raimondii HOM05D005677 ORTHO05D006966 5.4e-43 178.3 205 47.8
Potri.007G025600 Populus trichocarpa HOM05D005677 ORTHO05D006966 1.6e-42 176.8 181 50.8
Sabra07G0022600 Salix brachista HOM05D005677 ORTHO05D006966 2.0e-42 176.4 181 50.8
AUR62007566 Chenopodium quinoa HOM05D005677 ORTHO05D006966 6.0e-42 174.9 161 54.7
arahy.Tifrunner.gnm1.ann1.6977IM Arachis hypogaea HOM05D005677 ORTHO05D006966 7.8e-42 174.5 185 50.3
CANSAT01G0942 Cannabis sativa HOM05D005677 ORTHO05D006966 7.8e-42 174.5 159 56.0
AUR62004051 Chenopodium quinoa HOM05D005677 ORTHO05D006966 7.8e-42 174.5 160 55.0
Gohir.D03G014700 Gossypium hirsutum HOM05D005677 ORTHO05D006966 1.0e-41 174.1 160 54.4
Actinidia19186 Actinidia chinensis HOM05D005677 ORTHO05D006966 1.3e-41 173.7 176 52.8
Lsat_1_v5_gn_4_152101 Lactuca sativa HOM05D005677 ORTHO05D006966 1.3e-41 173.7 181 53.0
Phvul.003G253400 Phaseolus vulgaris HOM05D005677 ORTHO05D006966 1.7e-41 173.3 182 51.1
Medtr8g077610 Medicago truncatula HOM05D005677 ORTHO05D006966 3.0e-41 172.6 174 52.9
Gohir.A02G165300 Gossypium hirsutum HOM05D005677 ORTHO05D006966 3.9e-41 172.2 160 54.4
VMungo0251G0356 Vigna mungo HOM05D005677 ORTHO05D006966 3.9e-41 172.2 182 51.1
arahy.Tifrunner.gnm1.ann1.V4VRBH Arachis hypogaea HOM05D005677 ORTHO05D006966 6.6e-41 171.4 187 49.7
Duzib147G0715 Durio zibethinus HOM05D005677 ORTHO05D006966 6.6e-41 171.4 177 51.4
EL10Ac6g15562 Beta vulgaris HOM05D005677 ORTHO05D006966 8.6e-41 171.0 161 55.3
SalBow5G4467 Salvia bowleyana HOM05D005677 ORTHO05D006966 8.6e-41 171.0 161 54.0
Psat4g079800 Pisum sativum HOM05D005677 ORTHO05D006966 1.1e-40 170.6 173 52.6
Atru.chr3.573 Acer truncatum HOM05D005677 ORTHO05D006966 1.5e-40 170.2 181 51.4
Carub.0005s1724 Capsella rubella HOM05D005677 ORTHO05D006966 1.5e-40 170.2 179 50.8
CiPaw.01G038100 Carya illinoinensis HOM05D005677 ORTHO05D006966 1.5e-40 170.2 187 50.3
Sed0020674 Sechium edule HOM05D005677 ORTHO05D006966 1.5e-40 170.2 176 50.6
MD15G1261800 Malus domestica HOM05D005677 ORTHO05D006966 1.9e-40 169.9 180 50.6
Psat4g092640 Pisum sativum HOM05D005677 ORTHO05D006966 1.9e-40 169.9 172 51.2
Prupe.7G154600 Prunus persica HOM05D005677 ORTHO05D006966 1.9e-40 169.9 181 50.3
Ah.03g140850 Amaranthus hybridus HOM05D005677 ORTHO05D006966 2.5e-40 169.5 157 56.1
Cfa004307 Carpinus fangiana HOM05D005677 ORTHO05D006966 2.5e-40 169.5 179 49.7
COL.COLO4_22080 Corchorus olitorius HOM05D005677 ORTHO05D006966 3.3e-40 169.1 177 50.8
HanXRQChr09g0261461 Helianthus annuus HOM05D005677 ORTHO05D006966 3.3e-40 169.1 157 57.3
TWI53G0229 Tripterygium wilfordii HOM05D005677 ORTHO05D006966 3.3e-40 169.1 165 54.5
Nn2g12315 Nelumbo nucifera HOM05D005677 ORTHO05D006966 5.6e-40 168.3 173 50.3
vmacro17831 Vaccinium macrocarpon HOM05D005677 ORTHO05D006966 5.6e-40 168.3 158 57.0
Haze_15089 Corylus avellana HOM05D005677 ORTHO05D006966 9.5e-40 167.5 178 50.0
CARHR281190 Cardamine hirsuta HOM05D005677 ORTHO05D006966 1.6e-39 166.8 179 49.7
Gohir.D11G190800 Gossypium hirsutum HOM05D005677 ORTHO05D006966 1.6e-39 166.8 166 50.6
Thecc.01G035800 Theobroma cacao HOM05D005677 ORTHO05D006966 1.6e-39 166.8 177 50.8
Ca_22266_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 2.8e-39 166.0 173 51.4
Ca_22280_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 2.8e-39 166.0 173 51.4
A01p21690 Brassica napus HOM05D005677 ORTHO05D006966 3.6e-39 165.6 176 49.4
BraA01t02078Z Brassica rapa HOM05D005677 ORTHO05D006966 3.6e-39 165.6 176 49.4
LjContig00448g0024692 Lotus japonicus HOM05D005677 ORTHO05D006966 3.6e-39 165.6 181 50.3
RcHm_v2.0_Chr2g0101571 Rosa chinensis HOM05D005677 ORTHO05D006966 3.6e-39 165.6 180 51.1
PGR102G2535 Punica granatum HOM05D005677 ORTHO05D006966 6.2e-39 164.9 182 48.9
AL8G23360 Arabidopsis lyrata HOM05D005677 ORTHO05D006966 8.1e-39 164.5 175 50.9
Glyma.02G057000 Glycine max HOM05D005677 ORTHO05D006966 8.1e-39 164.5 183 48.1
AT3G50850 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 1.1e-38 164.1 169 49.1
Hma1.2p1_0224F.1_g094650 Hydrangea macrophylla HOM05D005677 ORTHO05D006966 3.1e-38 162.5 181 50.3
AT5G49560 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 4.0e-38 162.2 158 52.5
Carub.0008s2796 Capsella rubella HOM05D005677 ORTHO05D006966 4.0e-38 162.2 178 48.9
DCAR_025942 Daucus carota HOM05D005677 ORTHO05D006966 4.0e-38 162.2 172 53.5
Sp7g14210 Schrenkiella parvula HOM05D005677 ORTHO05D006966 4.0e-38 162.2 178 47.8
FAN26G2780 Fragaria x ananassa HOM05D005677 ORTHO05D006966 5.2e-38 161.8 168 50.0
CARHR160400 Cardamine hirsuta HOM05D005677 ORTHO05D006966 6.8e-38 161.4 159 50.9
Thhalv10027491m.g Eutrema salsugineum HOM05D005677 ORTHO05D006966 8.9e-38 161.0 161 51.6
FAN19G0062 Fragaria x ananassa HOM05D005677 ORTHO05D006966 1.5e-37 160.2 168 49.4
FvH4_1g13310 Fragaria vesca HOM05D005677 ORTHO05D006966 3.4e-37 159.1 168 50.0
THA.LOC104821292 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 3.4e-37 159.1 191 45.5
TAR625G0490 Trochodendron aralioides HOM05D005677 ORTHO05D006966 4.4e-37 158.7 206 46.6
THA.LOC109115976 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 7.5e-37 157.9 191 45.0
DCAR_025564 Daucus carota HOM05D005677 ORTHO05D006966 9.9e-37 157.5 204 45.1
Thhalv10010630m.g Eutrema salsugineum HOM05D005677 ORTHO05D006966 1.3e-36 157.1 171 47.4
FAN28G0162 Fragaria x ananassa HOM05D005677 ORTHO05D006966 1.3e-36 157.1 166 50.0
BcaC09g50280 Brassica carinata HOM05D005677 ORTHO05D006966 1.7e-36 156.8 181 47.5
C01p27040 Brassica napus HOM05D005677 ORTHO05D006966 1.7e-36 156.8 181 47.5
BolC1t02652H Brassica oleracea HOM05D005677 ORTHO05D006966 1.7e-36 156.8 181 47.5
BcaC09g50274 Brassica carinata HOM05D005677 ORTHO05D006966 2.2e-36 156.4 202 46.0
QL06p046093 Quercus lobata HOM05D005677 ORTHO05D006966 2.2e-36 156.4 186 46.2
Aa31LG1G15100 Aethionema arabicum HOM05D005677 ORTHO05D006966 3.7e-36 155.6 169 49.7
Manes.01G135600 Manihot esculenta HOM05D005677 ORTHO05D006966 3.7e-36 155.6 170 49.4
PSO731G0124 Papaver somniferum HOM05D005677 ORTHO05D006966 3.7e-36 155.6 162 50.6
ECA232G2278 Erigeron canadensis HOM05D005677 ORTHO05D006966 6.4e-36 154.8 160 52.5
Rhsim08G0117300 Rhododendron simsii HOM05D000412 ORTHO05D002774 8.3e-36 154.5 170 47.6
BcaB01g00573 Brassica carinata HOM05D005677 ORTHO05D006966 1.1e-35 154.1 167 47.9
ClCG01G019540 Citrullus lanatus HOM05D005677 ORTHO05D006966 1.1e-35 154.1 183 44.8
BraA09t39853Z Brassica rapa HOM05D005677 ORTHO05D006966 1.4e-35 153.7 166 48.8
BolC8t50224H Brassica oleracea HOM05D005677 ORTHO05D006966 1.9e-35 153.3 158 50.0
Ciclev10026228m.g Citrus clementina HOM05D005677 ORTHO05D006966 1.9e-35 153.3 165 50.3
Cpa.g.sc6.112 Carica papaya HOM05D005677 ORTHO05D006966 3.2e-35 152.5 181 47.0
PSO210G3110 Papaver somniferum HOM05D005677 ORTHO05D006966 3.2e-35 152.5 162 49.4
CsaV3_6G046230 Cucumis sativus L. HOM05D005677 ORTHO05D006966 5.4e-35 151.8 189 44.4
BcaC07g39550 Brassica carinata HOM05D005677 ORTHO05D006966 1.6e-34 150.2 158 48.7
Aa31LG4G18970 Aethionema arabicum HOM05D005677 ORTHO05D006966 2.1e-34 149.8 174 46.6
MELO3C007826.2 Cucumis melo HOM05D005677 ORTHO05D006966 2.7e-34 149.4 175 45.1
C08p26060 Brassica napus HOM05D005677 ORTHO05D006966 3.5e-34 149.1 155 48.4
Gohir.A11G184300 Gossypium hirsutum HOM05D005677 ORTHO05D006966 7.8e-34 147.9 156 48.7
Eucgr.H01270 Eucalyptus grandis HOM05D005677 ORTHO05D006966 1.7e-33 146.7 176 46.6
Eucgr.L02813 Eucalyptus grandis HOM05D005677 ORTHO05D006966 5.1e-33 145.2 176 46.6
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 5.1e-33 145.2 162 47.5
HPP92_019510 Vanilla planifolia HOM05D005677 ORTHO05D006966 1.5e-29 133.7 159 44.7
THA.LOC104821296 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 1.4e-27 127.1 165 43.6
SEGI_16522 Sequoiadendron giganteum HOM05D005677 ORTHO05D006966 4.1e-27 125.6 163 43.6
Dinv39987 Davidia involucrata HOM05D005677 ORTHO05D006966 9.2e-27 124.4 136 50.7
Gorai.007G203300 Gossypium raimondii HOM05D005677 ORTHO05D006966 9.2e-27 124.4 135 46.7
ATR0772G168 Amborella trichopoda HOM05D005677 ORTHO05D006966 5.1e-25 118.6 163 42.9
Os07g0569500 Oryza sativa ssp. japonica HOM05D005677 ORTHO05D006966 2.5e-24 116.3 177 38.4
Lalb_Chr16g0388501 Lupinus albus HOM05D005677 ORTHO05D006966 9.6e-24 114.4 97 57.7
MBI03_g28536_MAGBIO Magnolia biondii HOM05D005677 ORTHO05D006966 4.0e-22 109.0 125 48.0
Zm00001eb324730 Zea mays HOM05D005677 ORTHO05D006966 6.9e-22 108.2 162 38.3
unitig_32.g11368 Utricularia gibba HOM05D005677 ORTHO05D006966 1.9e-19 100.1 79 65.8
Pp3c1_38340 Physcomitrium patens HOM05D005677 ORTHO05D006966 2.4e-19 99.8 184 37.0
TPR.G24140 Trifolium pratense HOM05D005677 ORTHO05D006966 4.2e-19 99.0 152 42.1
FAN23G0294 Fragaria x ananassa HOM05D005677 ORTHO05D006966 2.7e-18 96.3 121 49.6
AagrBONN_evm.TU.Sc2ySwM_368.1727 Anthoceros agrestis HOM05D005677 ORTHO05D006966 3.5e-18 95.9 146 36.3
A09p43960 Brassica napus HOM05D005677 ORTHO05D006966 5.6e-16 88.6 86 52.3
SMO364G0506 Selaginella moellendorffii HOM05D005677 ORTHO05D006966 2.6e-13 79.7 157 33.1
Mapoly0123s0005 Marchantia polymorpha HOM05D005677 ORTHO05D006966 3.8e-12 75.9 256 24.2
CAN.G468.9 Capsicum annuum HOM05D005677 ORTHO05D006966 3.2e-11 72.8 60 56.7
CDE02G2571 Ceratophyllum demersum HOM05D005677 ORTHO05D006966 1.2e-10 70.9 59 62.7
arahy.Tifrunner.gnm1.ann1.QCSB5K Arachis hypogaea HOM05D001229 ORTHO05D011199 1.8e-09 67.0 58 53.4
PRCOL_00003780 Prasinoderma coloniale HOM05D005677 ORTHO05D006966 2.3e-09 66.6 60 56.7
CBR_g3620 Chara braunii HOM05D005677 ORTHO05D006966 6.7e-09 65.1 72 48.6
Prupe.6G109400 Prunus persica HOM05D001602 ORTHO05D001470 2.5e-08 63.2 120 33.3
MD02G1147500 Malus domestica HOM05D005677 ORTHO05D006966 5.6e-08 62.0 43 62.8
Cfa026553 Carpinus fangiana HOM05D005677 ORTHO05D006966 7.4e-08 61.6 103 34.0
Cre17.g747147 Chlamydomonas reinhardtii HOM05D001602 ORTHO05D001470 2.1e-07 60.1 67 47.8
Ca_19306_v3 Cicer arietinum L. HOM05D001602 ORTHO05D001470 3.7e-07 59.3 83 41.0
DCAR_025565 Daucus carota HOM05D005677 ORTHO05D006966 4.8e-07 58.9 60 53.3
Cre03.g151650 Chlamydomonas reinhardtii HOM05D001602 ORTHO05D001470 6.2e-07 58.5 95 37.9
Glyma.11G194000 Glycine max HOM05D001602 ORTHO05D001470 6.2e-07 58.5 83 41.0
Glyma.12G079900 Glycine max HOM05D001602 ORTHO05D001470 6.2e-07 58.5 83 41.0
Psat7g192040 Pisum sativum HOM05D001602 ORTHO05D001470 6.2e-07 58.5 83 39.8
SGA_v2.0_scaffold263G45964 Striga asiatica HOM05D001602 ORTHO05D001470 8.1e-07 58.2 85 37.6
Rhsim13G0099500 Rhododendron simsii HOM05D001602 ORTHO05D001470 1.8e-06 57.0 85 38.8
vmacro03265 Vaccinium macrocarpon HOM05D001602 ORTHO05D001470 1.8e-06 57.0 85 38.8
VMungo1127G0611 Vigna mungo HOM05D001602 ORTHO05D001470 2.4e-06 56.6 83 41.0
Zm00001eb258970 Zea mays HOM05D001602 ORTHO05D001470 2.4e-06 56.6 85 36.5
Haze_18406 Corylus avellana HOM05D000219 ORTHO05D000226 3.1e-06 56.2 96 40.6
Phvul.011G084600 Phaseolus vulgaris HOM05D001602 ORTHO05D001470 3.1e-06 56.2 83 39.8
Cre16.g667200 Chlamydomonas reinhardtii HOM05D005677 ORTHO05D006966 4.0e-06 55.8 70 42.9
Atru.chr3.3538 Acer truncatum HOM05D001602 ORTHO05D001470 5.3e-06 55.5 85 37.6
Actinidia24136 Actinidia chinensis HOM05D001602 ORTHO05D001470 5.3e-06 55.5 85 35.3
Aqoxy2G01738 Aquilegia oxysepala HOM05D001602 ORTHO05D001470 5.3e-06 55.5 85 36.5
TWI31G1231 Tripterygium wilfordii HOM05D001602 ORTHO05D001470 5.3e-06 55.5 85 38.8
TAR636G1265 Trochodendron aralioides HOM05D001602 ORTHO05D001470 5.3e-06 55.5 85 37.6
CDE05G3564 Ceratophyllum demersum HOM05D001602 ORTHO05D001470 6.9e-06 55.1 79 38.0
Peaxi162Scf00892g00120 Petunia axillaris HOM05D001602 ORTHO05D001470 6.9e-06 55.1 85 36.5
ATR0105G012 Amborella trichopoda HOM05D001602 ORTHO05D001470 9.0e-06 54.7 86 36.0
FAN21G1863 Fragaria x ananassa HOM05D001602 ORTHO05D001470 9.0e-06 54.7 90 36.7
Nitab4.5_0005092g0040 Nicotiana tabacum HOM05D001602 ORTHO05D001470 9.0e-06 54.7 85 36.5
TPR.G6130 Trifolium pratense HOM05D001602 ORTHO05D001470 9.0e-06 54.7 83 38.6
GSVIVG01031494001 Vitis vinifera HOM05D001602 ORTHO05D001470 9.0e-06 54.7 85 37.6


User provided reference genes

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