Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 2.0e-83 312.4 154 100.0
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 2.3e-47 192.6 102 90.2
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 3.0e-47 192.2 102 91.2
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 4.1e-41 171.8 91 91.2
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 5.1e-39 164.9 104 74.0
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 7.3e-38 161.0 102 74.5
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 7.3e-38 161.0 102 74.5
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 9.5e-38 160.6 104 73.1
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 1.2e-37 160.2 101 72.3
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 1.6e-37 159.8 104 72.1
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 2.8e-37 159.1 102 73.5
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 3.6e-37 158.7 102 73.5
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 4.7e-37 158.3 101 74.3
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 6.2e-37 157.9 101 73.3
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 6.2e-37 157.9 102 73.5
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 6.2e-37 157.9 102 71.6
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 1.4e-36 156.8 102 72.5
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 2.3e-36 156.0 101 70.3
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 3.1e-36 155.6 102 70.6
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 3.1e-36 155.6 103 68.9
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 4.0e-36 155.2 102 71.6
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 5.2e-36 154.8 102 71.6
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 5.2e-36 154.8 101 72.3
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 5.2e-36 154.8 106 68.9
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 5.2e-36 154.8 102 73.5
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 1.2e-35 153.7 103 70.9
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 2.0e-35 152.9 104 69.2
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 2.0e-35 152.9 103 68.9
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 2.0e-35 152.9 101 70.3
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 2.6e-35 152.5 103 70.9
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 3.4e-35 152.1 101 67.3
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 3.4e-35 152.1 101 67.3
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 3.4e-35 152.1 109 66.1
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 7.6e-35 151.0 100 68.0
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 7.6e-35 151.0 101 72.3
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 7.6e-35 151.0 102 69.6
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.3e-34 150.2 104 67.3
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 1.7e-34 149.8 102 68.6
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 1.7e-34 149.8 101 67.3
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 2.2e-34 149.4 101 71.3
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.2e-34 149.4 102 68.6
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 3.7e-34 148.7 102 67.6
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 3.7e-34 148.7 102 67.6
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 3.7e-34 148.7 102 70.6
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 3.7e-34 148.7 101 70.3
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 3.7e-34 148.7 102 69.6
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 4.9e-34 148.3 101 68.3
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 4.9e-34 148.3 101 67.3
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 4.9e-34 148.3 101 68.3
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 6.4e-34 147.9 101 69.3
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 8.4e-34 147.5 102 68.6
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 8.4e-34 147.5 102 68.6
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 1.1e-33 147.1 101 69.3
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 1.1e-33 147.1 101 71.3
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 1.1e-33 147.1 100 71.0
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 1.1e-33 147.1 101 67.3
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 1.4e-33 146.7 101 68.3
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 1.4e-33 146.7 101 68.3
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 1.4e-33 146.7 101 68.3
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 1.4e-33 146.7 101 68.3
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 1.4e-33 146.7 101 69.3
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 2.4e-33 146.0 104 67.3
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 2.4e-33 146.0 102 68.6
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 2.4e-33 146.0 101 68.3
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 2.4e-33 146.0 101 70.3
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 2.4e-33 146.0 102 65.7
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 3.2e-33 145.6 101 68.3
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 3.2e-33 145.6 101 68.3
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 3.2e-33 145.6 101 67.3
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 4.1e-33 145.2 102 69.6
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 4.1e-33 145.2 102 69.6
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 4.1e-33 145.2 100 69.0
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 4.1e-33 145.2 101 68.3
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 5.4e-33 144.8 101 68.3
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 7.1e-33 144.4 102 69.6
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 7.1e-33 144.4 102 69.6
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 7.1e-33 144.4 101 68.3
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 7.1e-33 144.4 101 67.3
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 9.2e-33 144.1 103 67.0
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 1.2e-32 143.7 100 70.0
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 2.1e-32 142.9 101 67.3
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 3.5e-32 142.1 101 68.3
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 3.5e-32 142.1 100 70.0
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 6.0e-32 141.4 102 65.7
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 7.8e-32 141.0 100 67.0
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 1.7e-31 139.8 102 67.6
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 3.9e-31 138.7 103 65.0
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 5.1e-31 138.3 102 66.7
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 5.1e-31 138.3 101 64.4
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.9e-30 136.3 100 64.0
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 1.9e-30 136.3 100 67.0
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 1.9e-30 136.3 100 66.0
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 2.5e-30 136.0 102 64.7
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 3.3e-30 135.6 102 62.7
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 6.2e-29 131.3 98 68.4
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 8.1e-29 131.0 93 67.7
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 1.4e-28 130.2 101 63.4
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 6.8e-28 127.9 102 61.8
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 8.9e-28 127.5 102 65.7
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 4.2e-25 118.6 102 61.8
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 1.0e-23 114.0 102 60.8
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 5.1e-23 111.7 93 61.3
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 1.1e-22 110.5 65 81.5
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.5e-22 109.4 118 51.7
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 1.3e-21 107.1 111 51.4
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 1.6e-21 106.7 96 54.2
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 9.0e-20 100.9 102 54.9
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.4e-19 99.0 115 49.6
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 7.6e-19 97.8 66 69.7
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 9.9e-19 97.4 100 45.0
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 3.2e-17 92.4 102 50.0
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 4.2e-17 92.0 59 71.2
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.2e-16 90.5 95 46.3
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 1.2e-16 90.5 65 64.6
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 3.9e-15 85.5 66 60.6
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 1.9e-14 83.2 59 64.4
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 2.1e-13 79.7 105 41.0
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 2.8e-13 79.3 60 60.0
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 2.6e-11 72.8 43 76.7
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 8.4e-10 67.8 103 35.9
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 6.0e-08 61.6 77 45.5
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 1.8e-07 60.1 53 52.8
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 6.7e-07 58.2 48 58.3
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 9.6e-06 54.3 68 48.5


User provided reference genes

Program Settings