Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033637.2 Olea europaea HOM05D006182 ORTHO05D007236 0.0e+00 1647.5 808 100.0
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 5.3e-196 688.7 817 48.5
SalBow7G1322 Salvia bowleyana HOM05D006182 ORTHO05D007236 2.1e-176 623.6 799 45.1
SGA_v2.0_scaffold217G42430 Striga asiatica HOM05D006182 ORTHO05D007236 8.8e-167 591.7 786 44.3
Actinidia22605 Actinidia chinensis HOM05D006182 ORTHO05D007236 2.0e-166 590.5 824 42.4
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 8.8e-159 565.1 828 40.2
Cc00_g16120 Coffea canephora HOM05D006182 ORTHO05D007236 4.8e-157 559.3 832 40.5
Lj4A50G37 Lonicera japonica HOM05D006182 ORTHO05D007236 1.2e-155 554.7 813 42.9
PGSC0003DMG400031482 Solanum tuberosum HOM05D006182 ORTHO05D007236 3.4e-150 536.6 830 39.2
Migut.C00612 Erythranthe guttata HOM05D006182 ORTHO05D007236 1.1e-148 531.6 771 42.8
Sopen07g009980 Solanum pennellii HOM05D006182 ORTHO05D007236 9.1e-148 528.5 820 38.8
Solyc12g062480.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 1.7e-146 524.2 822 38.6
Sopen12g025610 Solanum pennellii HOM05D006182 ORTHO05D007236 3.8e-146 523.1 821 38.7
CAN.G210.12 Capsicum annuum HOM05D006182 ORTHO05D007236 2.5e-145 520.4 827 37.5
Prupe.1G390200 Prunus persica HOM05D006182 ORTHO05D007236 4.9e-141 506.1 821 38.9
Dinv35991 Davidia involucrata HOM05D006182 ORTHO05D007236 1.8e-140 504.2 658 45.0
Atru.chr13.613 Acer truncatum HOM05D006182 ORTHO05D007236 1.6e-139 501.1 828 39.6
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 7.7e-139 498.8 811 38.3
QL02p006174 Quercus lobata HOM05D006182 ORTHO05D007236 8.0e-136 488.8 818 38.5
CiPaw.15G064200 Carya illinoinensis HOM05D006182 ORTHO05D007236 1.6e-131 474.6 819 37.1
Cfa018501 Carpinus fangiana HOM05D006182 ORTHO05D007236 2.0e-131 474.2 820 37.6
FAN18G2601 Fragaria x ananassa HOM05D006182 ORTHO05D007236 4.6e-131 473.0 839 37.5
Potri.002G129000 Populus trichocarpa HOM05D006182 ORTHO05D007236 1.0e-130 471.9 846 37.5
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 1.3e-130 471.5 746 39.1
DCAR_012766 Daucus carota HOM05D006182 ORTHO05D007236 5.0e-130 469.5 817 37.0
Manes.05G170000 Manihot esculenta HOM05D006182 ORTHO05D007236 8.6e-130 468.8 827 37.8
RcHm_v2.0_Chr7g0224651 Rosa chinensis HOM05D006182 ORTHO05D007236 1.6e-128 464.5 840 37.9
FvH4_5g30300 Fragaria vesca HOM05D006182 ORTHO05D007236 3.1e-127 460.3 839 37.1
MD08G1060500 Malus domestica HOM05D006182 ORTHO05D007236 3.4e-126 456.8 814 36.7
FAN08G0368 Fragaria x ananassa HOM05D006182 ORTHO05D007236 5.8e-126 456.1 832 37.0
Haze_17575 Corylus avellana HOM05D006182 ORTHO05D007236 9.8e-126 455.3 870 36.2
Sabra02G0101100 Salix brachista HOM05D006182 ORTHO05D007236 3.5e-123 446.8 828 37.6
ECA232G1194 Erigeron canadensis HOM05D006182 ORTHO05D007236 4.9e-117 426.4 792 34.8
TWI56G0571 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 1.7e-114 417.9 821 35.6
CANSAT64G1322 Cannabis sativa HOM05D006182 ORTHO05D007236 3.0e-114 417.2 845 35.3
Sc15g0006450 Simmondsia chinensis HOM05D006182 ORTHO05D007236 3.9e-114 416.8 834 34.8
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 3.9e-114 416.8 810 35.9
Ciclev10003312m.g Citrus clementina HOM05D006182 ORTHO05D007236 5.2e-111 406.4 746 37.4
HanXRQChr09g0268131 Helianthus annuus HOM05D006182 ORTHO05D007236 5.2e-111 406.4 794 34.8
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 1.7e-109 401.4 832 35.1
MBI16_g27588_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 3.8e-109 400.2 826 34.9
Glyma.08G236800 Glycine max HOM05D006182 ORTHO05D007236 4.9e-109 399.8 821 33.4
PGR031G1311 Punica granatum HOM05D006182 ORTHO05D007236 8.4e-109 399.1 829 34.7
Duzib093G2194 Durio zibethinus HOM05D006182 ORTHO05D007236 3.0e-106 390.6 821 35.0
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 8.6e-106 389.0 792 34.8
Aqoxy2G01750 Aquilegia oxysepala HOM05D006182 ORTHO05D007236 4.3e-105 386.7 853 34.3
CsaV3_4G034020 Cucumis sativus L. HOM05D006182 ORTHO05D007236 1.6e-104 384.8 809 33.0
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 2.4e-103 380.9 806 34.5
MELO3C032401.2 Cucumis melo HOM05D006182 ORTHO05D007236 8.4e-101 372.5 833 32.2
Nitab4.5_0003237g0020 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.1e-100 372.1 614 36.0
EL10Ac1g01812 Beta vulgaris HOM05D006182 ORTHO05D007236 1.9e-100 371.3 791 33.8
COL.COLO4_26443 Corchorus olitorius HOM05D006182 ORTHO05D007236 7.1e-100 369.4 817 33.8
Sed0017871 Sechium edule HOM05D006182 ORTHO05D007236 2.1e-99 367.9 814 31.3
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 2.3e-98 364.4 815 30.8
Psat4g135680 Pisum sativum HOM05D006182 ORTHO05D007236 1.9e-97 361.3 818 34.0
ClCG05G019560 Citrullus lanatus HOM05D006182 ORTHO05D007236 3.3e-97 360.5 773 33.6
Lj3g0019378 Lotus japonicus HOM05D006182 ORTHO05D007236 4.3e-97 360.1 826 32.6
TPR.G9412 Trifolium pratense HOM05D006182 ORTHO05D007236 1.4e-95 355.1 813 33.5
Peaxi162Scf00929g00711 Petunia axillaris HOM05D006182 ORTHO05D007236 5.3e-95 353.2 619 35.2
Lsat_1_v5_gn_4_124380 Lactuca sativa HOM05D006182 ORTHO05D007236 6.9e-95 352.8 790 32.0
Nitab4.5_0001611g0150 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.5e-94 351.7 663 33.2
Hund17608 Selenicereus undatus HOM05D006182 ORTHO05D007236 2.2e-93 347.8 828 31.8
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 2.9e-93 347.4 813 33.5
PSO541G3468 Papaver somniferum HOM05D006182 ORTHO05D007236 1.9e-92 344.7 835 32.0
Gorai.009G018100 Gossypium raimondii HOM05D006182 ORTHO05D007236 4.6e-91 340.1 814 33.5
Gohir.D05G017700 Gossypium hirsutum HOM05D006182 ORTHO05D007236 7.4e-81 306.2 814 32.2
Ah.05g168900 Amaranthus hybridus HOM05D006182 ORTHO05D007236 2.8e-80 304.3 832 30.5
THA.LOC104816122 Tarenaya hassleriana HOM05D006182 ORTHO05D007236 2.6e-78 297.7 829 31.6
unitig_8.g5014 Utricularia gibba HOM05D006182 ORTHO05D007236 3.4e-78 297.4 804 31.0
AL6G43320 Arabidopsis lyrata HOM05D006182 ORTHO05D007236 1.4e-76 292.0 805 30.2
AUR62031379 Chenopodium quinoa HOM05D006182 ORTHO05D007236 1.6e-75 288.5 795 30.3
Sp6g07920 Schrenkiella parvula HOM05D006182 ORTHO05D007236 3.5e-75 287.3 801 30.0
PSO675G0403 Papaver somniferum HOM05D006182 ORTHO05D007236 6.0e-75 286.6 808 30.3
Aa31LG9G14980 Aethionema arabicum HOM05D006182 ORTHO05D007236 1.5e-73 282.0 801 29.2
Thhalv10029299m.g Eutrema salsugineum HOM05D006182 ORTHO05D007236 5.7e-73 280.0 799 28.9
Solyc07g021120.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 5.7e-73 280.0 522 34.3
Carub.0006s2813 Capsella rubella HOM05D006182 ORTHO05D007236 9.0e-71 272.7 807 29.5
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 3.2e-68 264.2 827 27.8
BraA09t38510Z Brassica rapa HOM05D006182 ORTHO05D007236 6.7e-66 256.5 800 28.1
BcaB01g01419 Brassica carinata HOM05D006182 ORTHO05D007236 7.4e-65 253.1 798 27.9
A09p29430 Brassica napus HOM05D006182 ORTHO05D007236 2.2e-64 251.5 805 28.0
C09p37620 Brassica napus HOM05D006182 ORTHO05D007236 2.2e-64 251.5 805 28.0
BolC9t56593H Brassica oleracea HOM05D006182 ORTHO05D007236 2.2e-64 251.5 805 28.0
BcaC04g20947 Brassica carinata HOM05D006182 ORTHO05D007236 2.8e-64 251.1 803 27.9
Cpa.g.sc376.1 Carica papaya HOM05D006182 ORTHO05D007236 1.4e-63 248.8 544 32.4
GSVIVG01009571001 Vitis vinifera HOM05D006182 ORTHO05D007236 1.5e-57 228.8 268 47.0
AT4G09680 Arabidopsis thaliana HOM05D006182 ORTHO05D007236 1.4e-55 222.2 650 28.8
Nitab4.5_0001611g0140 Nicotiana tabacum HOM05D006182 ORTHO05D007236 7.0e-47 193.4 207 52.2
Nitab4.5_0003237g0010 Nicotiana tabacum HOM05D006182 ORTHO05D007236 2.9e-45 188.0 195 52.3
Zm00001eb311480 Zea mays HOM05D006182 ORTHO05D007236 1.5e-41 175.6 822 24.1
CARHR260630 Cardamine hirsuta HOM05D006182 ORTHO05D007236 1.3e-40 172.6 598 26.9
CDE02G1449 Ceratophyllum demersum HOM05D006182 ORTHO05D007236 1.7e-40 172.2 471 29.7
Lalb_Chr04g0264181 Lupinus albus HOM05D006182 ORTHO05D007236 3.6e-35 154.5 272 36.0
Lalb_Chr04g0264191 Lupinus albus HOM05D006182 ORTHO05D007236 8.8e-34 149.8 413 30.3
HPP92_010556 Vanilla planifolia HOM05D006182 ORTHO05D007236 1.2e-25 122.9 204 36.8
SHI08237 Sapria himalayana HOM05D006182 ORTHO05D007236 7.8e-22 110.2 248 36.7
unitig_19.g30005 Utricularia gibba HOM05D006182 ORTHO05D007236 3.3e-20 104.8 230 33.0
Ca_05108_v3 Cicer arietinum L. HOM05D006182 ORTHO05D007236 3.0e-18 98.2 162 35.2
Lalb_Chr04g0264211 Lupinus albus HOM05D006182 ORTHO05D007236 8.9e-18 96.7 136 39.7
HPP92_010557 Vanilla planifolia HOM05D006182 ORTHO05D007236 4.1e-15 87.8 168 34.5
unitig_19.g30006 Utricularia gibba HOM05D006182 ORTHO05D007236 8.6e-13 80.1 150 36.7
Solyc07g021115.1 Solanum lycopersicum HOM05D006182 ORTHO05D007236 5.6e-12 77.4 79 48.1
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 8.0e-11 73.6 486 22.6
Pp3c12_3560 Physcomitrium patens HOM05D006182 ORTHO05D007236 3.7e-08 64.7 227 26.4
SEGI_19792 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 8.3e-08 63.5 246 26.4
VMungo1127G0903 Vigna mungo HOM05D006182 ORTHO05D007236 1.1e-07 63.2 161 28.6


User provided reference genes

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