Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 1.8e-122 442.6 218 100.0
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 1.5e-73 280.0 175 76.6
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 3.4e-73 278.9 187 70.6
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 2.9e-72 275.8 174 74.7
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 4.9e-72 275.0 221 62.4
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 1.4e-71 273.5 188 70.2
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 1.9e-71 273.1 187 67.9
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 1.9e-71 273.1 222 60.8
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 1.9e-71 273.1 216 62.5
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 2.4e-71 272.7 192 69.8
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 5.4e-71 271.6 189 69.3
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 5.4e-71 271.6 222 60.4
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 2.1e-70 269.6 183 70.5
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 4.6e-70 268.5 202 64.9
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 6.0e-70 268.1 189 68.3
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 7.8e-70 267.7 171 72.5
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 1.0e-69 267.3 226 61.9
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.3e-69 266.9 179 70.9
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 1.3e-69 266.9 190 66.8
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 1.7e-69 266.5 202 64.9
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 3.9e-69 265.4 181 70.2
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 3.9e-69 265.4 183 67.8
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 5.1e-69 265.0 213 63.8
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.1e-68 263.8 190 67.4
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.5e-68 263.5 210 63.8
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 1.9e-68 263.1 238 58.0
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 1.9e-68 263.1 190 66.3
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 2.5e-68 262.7 195 65.1
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 3.3e-68 262.3 214 62.1
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 4.3e-68 261.9 189 63.5
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 5.6e-68 261.5 174 70.1
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 1.3e-67 260.4 186 68.8
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 1.3e-67 260.4 210 62.9
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 1.3e-67 260.4 173 70.5
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 2.1e-67 259.6 175 69.7
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 2.1e-67 259.6 193 64.2
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 2.1e-67 259.6 210 63.3
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 2.1e-67 259.6 198 64.6
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 2.1e-67 259.6 181 68.5
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 2.8e-67 259.2 203 62.6
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 8.1e-67 257.7 216 61.1
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.1e-66 257.3 207 62.3
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 1.4e-66 256.9 177 70.6
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 1.4e-66 256.9 177 66.7
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 2.4e-66 256.1 205 62.0
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 4.0e-66 255.4 184 67.4
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 6.9e-66 254.6 174 68.4
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 6.9e-66 254.6 175 67.4
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 6.9e-66 254.6 209 61.2
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 9.0e-66 254.2 212 59.4
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 1.5e-65 253.4 212 58.5
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 2.6e-65 252.7 206 60.2
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 4.5e-65 251.9 176 66.5
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 5.8e-65 251.5 183 65.0
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 7.6e-65 251.1 177 65.5
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 7.6e-65 251.1 192 59.4
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 9.9e-65 250.8 189 64.6
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 2.9e-64 249.2 180 64.4
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 2.9e-64 249.2 180 64.4
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 6.4e-64 248.1 177 67.2
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 4.2e-63 245.4 213 57.7
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 4.2e-63 245.4 213 57.7
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 4.2e-63 245.4 175 64.6
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 5.4e-63 245.0 206 58.7
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 5.4e-63 245.0 174 65.5
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 7.1e-63 244.6 185 62.2
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 1.6e-62 243.4 197 59.4
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 1.6e-62 243.4 197 59.4
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 4.6e-62 241.9 176 67.0
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 1.0e-61 240.7 174 63.8
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 2.3e-61 239.6 173 63.6
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 3.0e-61 239.2 208 55.8
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 3.9e-61 238.8 170 64.7
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 5.1e-61 238.4 174 63.2
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 6.7e-61 238.0 200 59.5
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 8.7e-61 237.7 211 56.9
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 2.5e-60 236.1 218 54.6
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 3.3e-60 235.7 197 58.4
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 1.1e-58 230.7 218 53.2
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.1e-58 230.7 171 62.6
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 3.1e-58 229.2 183 63.9
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 5.3e-58 228.4 160 66.9
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 5.3e-58 228.4 179 64.2
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 6.9e-58 228.0 179 64.2
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 4.9e-56 221.9 207 57.0
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 1.6e-54 216.9 163 63.8
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 7.9e-54 214.5 179 60.9
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 7.9e-54 214.5 174 62.6
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 7.9e-54 214.5 156 66.0
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 1.3e-53 213.8 209 53.1
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 3.7e-51 205.7 212 52.8
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 2.4e-50 203.0 137 66.4
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 1.1e-47 194.1 133 67.7
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 2.5e-47 193.0 147 63.9
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 4.2e-47 192.2 182 56.0
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 1.6e-46 190.3 131 69.5
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.3e-45 187.2 169 53.3
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 6.7e-45 184.9 146 65.1
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 1.9e-44 183.3 170 50.6
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 2.8e-43 179.5 191 49.7
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 6.3e-43 178.3 168 49.4
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 9.0e-42 174.5 124 66.9
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 1.0e-40 171.0 183 47.0
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 6.1e-38 161.8 161 52.8
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 7.9e-38 161.4 164 50.6
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 6.7e-37 158.3 190 46.3
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 9.7e-36 154.5 177 45.2
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 4.1e-34 149.1 115 62.6
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 1.9e-31 140.2 119 58.0
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 6.7e-29 131.7 143 49.0
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 3.3e-28 129.4 102 63.7
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 7.4e-28 128.3 85 69.4
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.8e-26 123.6 106 55.7
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 5.3e-26 122.1 86 65.1
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 2.5e-23 113.2 125 50.4
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 9.4e-23 111.3 126 46.8
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 1.2e-22 110.9 113 47.8
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 2.2e-19 100.1 71 67.6
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 1.4e-18 97.4 106 45.3
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 7.0e-18 95.1 64 64.1
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 4.5e-17 92.4 64 71.9
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 2.1e-14 83.6 127 38.6
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 1.8e-13 80.5 70 62.9
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 3.3e-12 76.3 42 83.3
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 4.4e-12 75.9 109 36.7
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 3.1e-10 69.7 47 66.0
PRCOL_00005216 Prasinoderma coloniale HOM05D006215 ORTHO05D007719 2.0e-09 67.0 192 32.8
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 1.3e-08 64.3 40 65.0
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 8.5e-08 61.6 48 62.5
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 8.0e-06 55.1 35 68.6


User provided reference genes

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