Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 4.0e-53 211.1 99 100.0
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 2.3e-21 105.5 74 71.6
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 1.9e-18 95.9 74 64.9
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 3.2e-18 95.1 74 60.8
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.1e-15 86.7 75 56.0
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 1.5e-15 86.3 74 55.4
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 2.5e-15 85.5 74 59.5
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 5.6e-15 84.3 73 50.7
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 5.6e-15 84.3 74 55.4
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 7.3e-15 84.0 77 54.5
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 7.3e-15 84.0 74 54.1
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 9.5e-15 83.6 75 53.3
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 9.5e-15 83.6 74 55.4
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 9.5e-15 83.6 74 55.4
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 1.2e-14 83.2 74 56.8
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 1.6e-14 82.8 74 56.8
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 2.1e-14 82.4 75 56.0
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 2.8e-14 82.0 78 53.8
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 3.6e-14 81.6 75 54.7
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 4.7e-14 81.3 75 50.7
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 6.2e-14 80.9 75 53.3
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 6.2e-14 80.9 75 53.3
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 6.2e-14 80.9 73 53.4
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 6.2e-14 80.9 74 51.4
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 6.2e-14 80.9 75 54.7
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 1.1e-13 80.1 73 50.7
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 1.4e-13 79.7 75 53.3
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 1.4e-13 79.7 76 55.3
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 1.4e-13 79.7 74 52.7
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 1.8e-13 79.3 75 49.3
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 2.3e-13 79.0 75 49.3
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 3.1e-13 78.6 74 50.0
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 3.1e-13 78.6 73 47.9
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 3.1e-13 78.6 74 52.7
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.1e-13 78.6 75 52.0
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 3.1e-13 78.6 73 56.2
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 3.1e-13 78.6 59 59.3
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 5.2e-13 77.8 74 54.1
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 5.2e-13 77.8 73 52.1
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 5.2e-13 77.8 74 54.1
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 6.8e-13 77.4 75 50.7
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 6.8e-13 77.4 73 52.1
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 6.8e-13 77.4 73 52.1
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 1.2e-12 76.6 73 46.6
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 1.5e-12 76.3 74 56.8
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 1.5e-12 76.3 73 52.1
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 2.0e-12 75.9 75 53.3
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.6e-12 75.5 73 50.7
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 2.6e-12 75.5 73 50.7
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 2.6e-12 75.5 73 52.1
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 2.6e-12 75.5 73 49.3
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 2.6e-12 75.5 73 49.3
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 3.4e-12 75.1 74 48.6
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 3.4e-12 75.1 74 47.3
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 4.4e-12 74.7 71 50.7
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 5.8e-12 74.3 52 63.5
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 5.8e-12 74.3 74 48.6
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 7.5e-12 73.9 74 54.1
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 7.5e-12 73.9 66 53.0
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 7.5e-12 73.9 75 50.7
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 9.9e-12 73.6 73 50.7
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 9.9e-12 73.6 75 52.0
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 9.9e-12 73.6 74 48.6
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 1.3e-11 73.2 78 50.0
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 1.3e-11 73.2 78 50.0
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 1.3e-11 73.2 77 53.2
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.3e-11 73.2 52 57.7
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 1.3e-11 73.2 73 46.6
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 1.7e-11 72.8 76 52.6
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.7e-11 72.8 76 52.6
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.7e-11 72.8 76 52.6
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 1.7e-11 72.8 67 52.2
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 2.2e-11 72.4 69 52.2
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 2.2e-11 72.4 69 52.2
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 2.2e-11 72.4 69 52.2
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 2.2e-11 72.4 74 48.6
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 2.2e-11 72.4 77 51.9
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 2.2e-11 72.4 73 52.1
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 2.2e-11 72.4 59 54.2
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 2.9e-11 72.0 75 49.3
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 2.9e-11 72.0 59 52.5
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 2.9e-11 72.0 74 43.2
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 4.9e-11 71.2 69 49.3
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 4.9e-11 71.2 73 46.6
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 6.4e-11 70.9 76 50.0
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 6.4e-11 70.9 73 46.6
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.4e-11 70.9 76 48.7
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 8.3e-11 70.5 76 51.3
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 8.3e-11 70.5 59 52.5
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 8.3e-11 70.5 75 50.7
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 1.4e-10 69.7 77 46.8
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 1.4e-10 69.7 73 45.2
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.9e-10 69.3 76 47.4
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 3.2e-10 68.6 67 46.3
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 3.2e-10 68.6 66 57.6
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 4.1e-10 68.2 64 48.4
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 4.1e-10 68.2 73 53.4
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 5.4e-10 67.8 68 45.6
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 5.4e-10 67.8 58 51.7
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 5.4e-10 67.8 74 44.6
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 5.4e-10 67.8 48 60.4
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 9.2e-10 67.0 61 50.8
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 9.2e-10 67.0 52 53.8
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 1.6e-09 66.2 61 50.8
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 2.1e-09 65.9 73 45.2
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 4.6e-09 64.7 73 39.7
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 7.8e-09 63.9 65 55.4
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.0e-08 63.5 48 56.2
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 3.0e-08 62.0 76 42.1
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 8.6e-08 60.5 76 39.5
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 3.3e-07 58.5 56 44.6
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 9.5e-07 57.0 67 43.3
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 9.5e-07 57.0 60 43.3
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 3.6e-06 55.1 48 47.9
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 3.6e-06 55.1 73 34.2


User provided reference genes

Program Settings