Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 3.8e-51 204.5 102 100.0
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 2.8e-09 65.5 54 64.8
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 6.2e-09 64.3 55 61.8
Lj1g0004890 Lotus japonicus HOM05D007530 ORTHO05D009556 8.0e-09 63.9 43 69.8
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 1.1e-08 63.5 55 61.8
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 1.4e-08 63.2 60 56.7
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 1.8e-08 62.8 45 64.4
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 1.8e-08 62.8 55 61.8
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 1.8e-08 62.8 55 60.0
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 2.3e-08 62.4 70 50.0
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 4.0e-08 61.6 53 66.0
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 4.0e-08 61.6 55 60.0
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 5.2e-08 61.2 40 77.5
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 5.2e-08 61.2 55 60.0
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 6.8e-08 60.8 40 70.0
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 8.9e-08 60.5 53 64.2
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 1.2e-07 60.1 46 63.0
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 1.2e-07 60.1 55 60.0
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 1.2e-07 60.1 42 66.7
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 1.2e-07 60.1 54 57.4
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 1.2e-07 60.1 40 70.0
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.5e-07 59.7 53 64.2
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 2.0e-07 59.3 57 57.9
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 2.0e-07 59.3 54 57.4
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 2.0e-07 59.3 54 57.4
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 2.0e-07 59.3 41 65.9
Sabra16G0114900 Salix brachista HOM05D007530 ORTHO05D000135 2.0e-07 59.3 55 60.0
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 2.0e-07 59.3 39 66.7
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 3.4e-07 58.5 41 65.9
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 4.4e-07 58.2 55 56.4
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 4.4e-07 58.2 40 67.5
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 5.8e-07 57.8 40 67.5
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 7.5e-07 57.4 40 70.0
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 7.5e-07 57.4 38 71.1
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 9.8e-07 57.0 40 62.5
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 9.8e-07 57.0 53 56.6
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 9.8e-07 57.0 53 60.4
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 9.8e-07 57.0 41 65.9
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 9.8e-07 57.0 40 65.0
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 9.8e-07 57.0 40 65.0
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 1.3e-06 56.6 40 65.0
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 1.3e-06 56.6 63 47.6
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.3e-06 56.6 55 54.5
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 1.7e-06 56.2 53 58.5
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 2.2e-06 55.8 40 65.0
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 2.2e-06 55.8 40 65.0
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 2.9e-06 55.5 55 56.4
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 4.9e-06 54.7 44 59.1
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 4.9e-06 54.7 40 62.5
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 4.9e-06 54.7 40 60.0
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 6.4e-06 54.3 40 62.5
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 6.4e-06 54.3 40 67.5
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 6.4e-06 54.3 82 42.7
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 6.4e-06 54.3 38 65.8
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 6.4e-06 54.3 77 44.2
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 8.3e-06 53.9 63 49.2


User provided reference genes

Program Settings