Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033511.1 Olea europaea HOM05D000169 ORTHO05D004780 1.8e-251 872.1 438 100.0
Migut.I00934 Erythranthe guttata HOM05D000169 ORTHO05D004780 5.1e-137 491.9 433 61.7
GSVIVG01017056001 Vitis vinifera HOM05D000169 ORTHO05D004780 1.0e-132 477.6 451 59.9
Actinidia21686 Actinidia chinensis HOM05D000169 ORTHO05D004780 1.7e-132 476.9 391 65.7
Hma1.2p1_1195F.1_g265900 Hydrangea macrophylla HOM05D000169 ORTHO05D004780 2.7e-130 469.5 390 63.1
CSS0039624 Camellia sinensis var. sinensis HOM05D000169 ORTHO05D004780 7.4e-128 461.5 391 63.4
Manes.11G037400 Manihot esculenta HOM05D000169 ORTHO05D004780 1.5e-125 453.8 427 59.3
MSTRG.11049 Avicennia marina HOM05D000169 ORTHO05D004780 2.6e-125 453.0 395 62.0
Eucgr.J02955 Eucalyptus grandis HOM05D000169 ORTHO05D004780 2.9e-124 449.5 384 63.5
CAN.G438.32 Capsicum annuum HOM05D000169 ORTHO05D004780 8.5e-124 448.0 390 62.3
TWI12G1479 Tripterygium wilfordii HOM05D000169 ORTHO05D004780 1.5e-123 447.2 382 62.8
Cfa002101 Carpinus fangiana HOM05D000169 ORTHO05D004780 3.2e-123 446.0 399 61.7
CANSAT56G0566 Cannabis sativa HOM05D000169 ORTHO05D004780 4.2e-123 445.7 442 56.8
CiPaw.02G148300 Carya illinoinensis HOM05D000169 ORTHO05D004780 2.7e-122 443.0 402 61.2
Peaxi162Scf00034g00413 Petunia axillaris HOM05D000169 ORTHO05D004780 3.6e-122 442.6 429 56.6
Sc15g0002130 Simmondsia chinensis HOM05D000169 ORTHO05D004780 4.7e-122 442.2 392 60.2
Ciclev10025185m.g Citrus clementina HOM05D000169 ORTHO05D004780 3.0e-121 439.5 386 60.6
Potri.001G185500 Populus trichocarpa HOM05D000169 ORTHO05D004780 5.2e-121 438.7 382 61.8
Aqoxy7G01575 Aquilegia oxysepala HOM05D000169 ORTHO05D004780 1.1e-120 437.6 457 55.4
Nn2g11670 Nelumbo nucifera HOM05D000169 ORTHO05D004780 1.1e-120 437.6 397 61.5
ECA232G3766 Erigeron canadensis HOM05D000169 ORTHO05D004780 1.5e-120 437.2 379 63.1
Thecc.06G093200 Theobroma cacao HOM05D000169 ORTHO05D004780 2.6e-120 436.4 383 60.8
MELO3C016565.2 Cucumis melo HOM05D000169 ORTHO05D004780 5.7e-120 435.3 433 56.8
MD17G1190300 Malus domestica HOM05D000169 ORTHO05D004780 7.4e-120 434.9 388 60.8
Medtr4g011790 Medicago truncatula HOM05D000169 ORTHO05D004780 1.3e-119 434.1 430 56.5
FvH4_6g31860 Fragaria vesca HOM05D000169 ORTHO05D004780 3.7e-119 432.6 437 55.8
TWI75G0003 Tripterygium wilfordii HOM05D000169 ORTHO05D004780 3.7e-119 432.6 382 60.7
arahy.Tifrunner.gnm1.ann1.5X7XAP Arachis hypogaea HOM05D000169 ORTHO05D004780 1.1e-118 431.0 430 55.3
TAR636G0874 Trochodendron aralioides HOM05D000169 ORTHO05D004780 9.1e-118 427.9 406 58.4
TPR.G38605 Trifolium pratense HOM05D000169 ORTHO05D004780 1.6e-117 427.2 430 55.8
Glyma.08G204300 Glycine max HOM05D000169 ORTHO05D004780 2.6e-117 426.4 430 54.2
Psat7g253800 Pisum sativum HOM05D000169 ORTHO05D004780 2.6e-117 426.4 389 58.4
Prupe.3G065200 Prunus persica HOM05D000169 ORTHO05D004780 3.5e-117 426.0 402 59.2
CiPaw.01G235100 Carya illinoinensis HOM05D000169 ORTHO05D004780 4.5e-117 425.6 402 59.2
Sabra01G0154600 Salix brachista HOM05D000169 ORTHO05D004780 1.7e-116 423.7 392 59.2
Glyma.07G019100 Glycine max HOM05D000169 ORTHO05D004780 8.5e-116 421.4 430 54.0
Sed0000326 Sechium edule HOM05D000169 ORTHO05D004780 1.5e-115 420.6 388 58.5
Oeu000461.2 Olea europaea HOM05D000169 ORTHO05D004780 4.2e-115 419.1 431 55.9
Medtr4g013210 Medicago truncatula HOM05D000169 ORTHO05D004780 2.1e-114 416.8 389 57.8
vmacro18881 Vaccinium macrocarpon HOM05D000169 ORTHO05D004780 3.6e-114 416.0 394 60.9
unitig_748.g7432 Utricularia gibba HOM05D000169 ORTHO05D004780 6.1e-114 415.2 395 56.7
Psat7g253640 Pisum sativum HOM05D000169 ORTHO05D004780 8.0e-114 414.8 453 51.4
Atru.chr1.3409_Atru.chr1.3410 Acer truncatum HOM05D000169 ORTHO05D004780 1.4e-113 414.1 424 55.2
Duzib160G0343 Durio zibethinus HOM05D000169 ORTHO05D004780 1.8e-113 413.7 390 57.9
Aa31LG8G3300 Aethionema arabicum HOM05D000169 ORTHO05D004780 4.0e-113 412.5 381 57.5
Phvul.010G148300 Phaseolus vulgaris HOM05D000169 ORTHO05D004780 6.8e-113 411.8 432 51.9
PGSC0003DMG400026465 Solanum tuberosum HOM05D000169 ORTHO05D004780 1.2e-112 411.0 435 54.9
Lj3g0027736 Lotus japonicus HOM05D000169 ORTHO05D004780 7.5e-112 408.3 390 56.7
THA.LOC104817978 Tarenaya hassleriana HOM05D000169 ORTHO05D004780 6.3e-111 405.2 385 56.4
HanXRQChr16g0500801 Helianthus annuus HOM05D000169 ORTHO05D004780 2.4e-110 403.3 380 58.4
SalBow2G1665 Salvia bowleyana HOM05D000169 ORTHO05D004780 2.4e-110 403.3 377 58.6
Nitab4.5_0001968g0110 Nicotiana tabacum HOM05D000169 ORTHO05D004780 9.1e-110 401.4 429 53.6
Gohir.A10G081900 Gossypium hirsutum HOM05D000169 ORTHO05D004780 1.6e-109 400.6 387 57.4
Nitab4.5_0001315g0060 Nicotiana tabacum HOM05D000169 ORTHO05D004780 3.5e-109 399.4 429 54.3
PSO566G0043 Papaver somniferum HOM05D000169 ORTHO05D004780 3.5e-109 399.4 386 57.3
A05p33330 Brassica napus HOM05D000169 ORTHO05D004780 5.9e-109 398.7 385 54.8
PSO782G1073 Papaver somniferum HOM05D000169 ORTHO05D004780 1.0e-108 397.9 386 57.5
Nitab4.5_0011683g0010 Nicotiana tabacum HOM05D000169 ORTHO05D004780 1.3e-108 397.5 429 54.1
AL3G28850 Arabidopsis lyrata HOM05D000169 ORTHO05D004780 2.2e-108 396.7 384 55.7
BraA05t22158Z Brassica rapa HOM05D000169 ORTHO05D004780 2.9e-108 396.4 385 54.3
Carub.0003s1591 Capsella rubella HOM05D000169 ORTHO05D004780 5.0e-108 395.6 384 56.0
arahy.Tifrunner.gnm1.ann1.4P55VP Arachis hypogaea HOM05D000169 ORTHO05D004780 8.5e-108 394.8 358 59.2
CARHR091330 Cardamine hirsuta HOM05D000169 ORTHO05D004780 1.5e-107 394.0 384 56.0
Sp3g14530 Schrenkiella parvula HOM05D000169 ORTHO05D004780 9.4e-107 391.3 426 51.9
ClCG10G006410 Citrullus lanatus HOM05D000169 ORTHO05D004780 1.6e-106 390.6 433 53.8
A01p37930 Brassica napus HOM05D000169 ORTHO05D004780 2.1e-106 390.2 386 54.7
AUR62016505 Chenopodium quinoa HOM05D000169 ORTHO05D004780 2.7e-106 389.8 406 52.7
Haze_16349 Corylus avellana HOM05D000169 ORTHO05D004780 3.6e-106 389.4 399 57.4
Thhalv10020466m.g Eutrema salsugineum HOM05D000169 ORTHO05D004780 3.6e-106 389.4 384 54.9
AT3G16170 Arabidopsis thaliana HOM05D000169 ORTHO05D004780 1.0e-105 387.9 387 55.0
AUR62011680 Chenopodium quinoa HOM05D000169 ORTHO05D004780 1.0e-105 387.9 406 53.0
TPR.G27504 Trifolium pratense HOM05D000169 ORTHO05D004780 1.0e-105 387.9 455 51.4
Gorai.011G073700 Gossypium raimondii HOM05D000169 ORTHO05D004780 1.4e-105 387.5 389 58.1
Nitab4.5_0002859g0130 Nicotiana tabacum HOM05D000169 ORTHO05D004780 1.4e-105 387.5 387 56.6
CDE05G2910 Ceratophyllum demersum HOM05D000169 ORTHO05D004780 3.0e-105 386.3 435 51.0
MD09G1208800 Malus domestica HOM05D000169 ORTHO05D004780 6.8e-105 385.2 478 48.3
BraA01t03853Z Brassica rapa HOM05D000169 ORTHO05D004780 8.8e-105 384.8 386 53.4
BolC1t04779H Brassica oleracea HOM05D000169 ORTHO05D004780 3.4e-104 382.9 384 53.6
C05p50330 Brassica napus HOM05D000169 ORTHO05D004780 7.5e-104 381.7 385 53.0
Psat3g156160 Pisum sativum HOM05D000169 ORTHO05D004780 1.7e-103 380.6 389 54.5
DCAR_026335 Daucus carota HOM05D000169 ORTHO05D004780 2.8e-103 379.8 397 56.4
Ah.01g021720 Amaranthus hybridus HOM05D000169 ORTHO05D004780 4.8e-103 379.0 401 53.1
BolC5t33782H Brassica oleracea HOM05D000169 ORTHO05D004780 6.3e-103 378.6 400 51.5
EL10Ac9g22056 Beta vulgaris HOM05D000169 ORTHO05D004780 1.8e-102 377.1 406 52.2
FAN14G0873 Fragaria x ananassa HOM05D000169 ORTHO05D004780 4.1e-102 375.9 437 51.5
FAN05G1415 Fragaria x ananassa HOM05D000169 ORTHO05D004780 1.2e-101 374.4 437 51.0
Zm00001eb152410 Zea mays HOM05D000169 ORTHO05D004780 2.0e-101 373.6 441 48.5
Ca_20416_v3 Cicer arietinum L. HOM05D000169 ORTHO05D004780 2.3e-100 370.2 389 53.7
Lj5A57T75 Lonicera japonica HOM05D000169 ORTHO05D004780 3.8e-100 369.4 340 60.9
MBI01_g30862_MAGBIO Magnolia biondii HOM05D000169 ORTHO05D004780 1.9e-99 367.1 447 50.8
Ca_20370_v3 Cicer arietinum L. HOM05D000169 ORTHO05D004780 1.6e-98 364.0 414 50.5
Lsat_1_v5_gn_4_103101 Lactuca sativa HOM05D000169 ORTHO05D004780 1.4e-97 360.9 420 51.7
Hund06638 Selenicereus undatus HOM05D000169 ORTHO05D004780 2.3e-97 360.1 379 54.1
TPR.G5245 Trifolium pratense HOM05D000169 ORTHO05D004780 5.2e-97 359.0 448 49.6
VMungo0331G1448 Vigna mungo HOM05D000169 ORTHO05D004780 8.3e-95 351.7 394 49.7
Gohir.D10G069600 Gossypium hirsutum HOM05D000169 ORTHO05D004780 6.6e-92 342.0 387 53.0
SMO203G0257 Selaginella moellendorffii HOM05D000169 ORTHO05D004780 1.1e-91 341.3 412 46.8
Mapoly0036s0029 Marchantia polymorpha HOM05D000169 ORTHO05D004780 1.5e-88 330.9 406 46.1
SEGI_23005 Sequoiadendron giganteum HOM05D000169 ORTHO05D004780 4.9e-87 325.9 471 43.1
Pp3c19_10110 Physcomitrium patens HOM05D000169 ORTHO05D004780 6.4e-87 325.5 424 45.3
Dinv30473 Davidia involucrata HOM05D000169 ORTHO05D004780 7.8e-85 318.5 280 60.4
Peaxi162Scf00015g00126 Petunia axillaris HOM05D000169 ORTHO05D004780 3.3e-83 313.2 398 49.7
C01p48140 Brassica napus HOM05D000169 ORTHO05D004780 6.8e-81 305.4 385 45.7
HPP92_024579 Vanilla planifolia HOM05D000169 ORTHO05D004780 1.5e-80 304.3 391 45.0
Mapoly0003s0295 Marchantia polymorpha HOM05D000169 ORTHO05D004780 4.4e-80 302.8 393 42.5
Pp3c1_9430 Physcomitrium patens HOM05D000169 ORTHO05D004780 5.8e-80 302.4 338 49.1
Solyc12g044290.2 Solanum lycopersicum HOM05D000169 ORTHO05D004780 2.3e-68 263.8 234 59.8
Cc04_g02960 Coffea canephora HOM05D000169 ORTHO05D004780 4.3e-67 259.6 235 61.3
Psat2g140320 Pisum sativum HOM05D005005 ORTHO05D004780 3.1e-65 253.4 288 50.3
QL05p021511 Quercus lobata HOM05D000169 ORTHO05D004780 1.3e-63 248.1 239 57.7
Psat1g148000 Pisum sativum HOM05D005005 ORTHO05D004359 1.1e-62 245.0 285 49.5
Lalb_Chr25g0280011 Lupinus albus HOM05D000169 ORTHO05D004780 4.2e-62 243.0 230 58.3
TAR624G1376 Trochodendron aralioides HOM05D000169 ORTHO05D004780 3.5e-61 240.0 246 54.5
RcHm_v2.0_Chr2g0139171 Rosa chinensis HOM05D000169 ORTHO05D004780 1.3e-60 238.0 239 57.7
Psat2g015720 Pisum sativum HOM05D000169 ORTHO05D004780 1.6e-58 231.1 385 40.3
SGA_v2.0_scaffold5G02549 Striga asiatica HOM05D000169 ORTHO05D004780 3.6e-58 229.9 391 42.2
PRCOL_00000351 Prasinoderma coloniale HOM05D000169 ORTHO05D004780 7.6e-56 222.2 392 37.0
HanXRQChr16g0501111 Helianthus annuus HOM05D000169 ORTHO05D004780 9.3e-54 215.3 146 73.3
Os01g0761300 Oryza sativa ssp. japonica HOM05D000169 ORTHO05D004780 9.3e-54 215.3 222 53.2
BcaB06g25712 Brassica carinata HOM05D000169 ORTHO05D004780 2.1e-53 214.2 222 52.3
Cc04_g02950 Coffea canephora HOM05D000169 ORTHO05D004780 7.9e-53 212.2 135 79.3
CBR_g3023 Chara braunii HOM05D000169 ORTHO05D004780 3.3e-51 206.8 392 33.7
Psat2g140280 Pisum sativum HOM05D005005 ORTHO05D006178 3.3e-51 206.8 286 44.8
Psat7g158320 Pisum sativum HOM05D005005 ORTHO05D006178 9.6e-51 205.3 285 44.9
Lalb_Chr25g0280021 Lupinus albus HOM05D000169 ORTHO05D004780 1.3e-50 204.9 176 60.8
HanXRQChr16g0501121 Helianthus annuus HOM05D000169 ORTHO05D004780 2.1e-50 204.1 136 76.5
CAN.G144.4 Capsicum annuum HOM05D000169 ORTHO05D004780 1.1e-49 201.8 185 58.9
COL.COLO4_30442 Corchorus olitorius HOM05D000169 ORTHO05D004780 1.1e-49 201.8 196 57.1
Solyc12g044300.2 Solanum lycopersicum HOM05D000169 ORTHO05D004780 5.3e-49 199.5 178 60.1
TAR624G0382 Trochodendron aralioides HOM05D000169 ORTHO05D004780 5.3e-49 199.5 132 75.8
CsaV3_3G005880 Cucumis sativus L. HOM05D000169 ORTHO05D004780 2.0e-48 197.6 176 61.4
ATR0315G134 Amborella trichopoda HOM05D000169 ORTHO05D004780 3.4e-48 196.8 135 71.9
RcHm_v2.0_Chr2g0139181 Rosa chinensis HOM05D000169 ORTHO05D004780 3.4e-48 196.8 132 72.0
CsaV3_3G005890 Cucumis sativus L. HOM05D000169 ORTHO05D004780 1.4e-46 191.4 169 61.5
ATR0315G109 Amborella trichopoda HOM05D000169 ORTHO05D004780 3.3e-43 180.3 381 35.2
Psat7g158200 Pisum sativum HOM05D005005 ORTHO05D006178 4.5e-40 169.9 286 39.2
ATR0315G057 Amborella trichopoda HOM05D000169 ORTHO05D004780 3.8e-39 166.8 206 48.1
Actinidia32723 Actinidia chinensis HOM05D005761 ORTHO05D007286 1.9e-38 164.5 109 78.9
CAN.G144.5 Capsicum annuum HOM05D000169 ORTHO05D004780 4.2e-38 163.3 151 56.3
Cpa.g.sc296.4 Carica papaya HOM05D000169 ORTHO05D004780 1.8e-36 157.9 152 57.9
MCO15G682 Micromonas commoda HOM05D000169 ORTHO05D004780 4.3e-35 153.3 360 33.9
Cpa.g.c28291.1 Carica papaya HOM05D000169 ORTHO05D004780 1.5e-32 144.8 147 55.1
Cpa.g.sc324.3 Carica papaya HOM05D000169 ORTHO05D004780 3.2e-30 137.1 96 71.9
Nitab4.5_0003054g0020 Nicotiana tabacum HOM05D000169 ORTHO05D004780 9.3e-30 135.6 251 36.7
Sopen12g022540 Solanum pennellii HOM05D000169 ORTHO05D004780 2.1e-29 134.4 95 71.6
Psat4g178600 Pisum sativum HOM05D002964 ORTHO05D003498 1.3e-26 125.2 137 47.4
COL.COLO4_30443 Corchorus olitorius HOM05D000169 ORTHO05D004780 2.4e-25 120.9 85 72.9
SHI18051 Sapria himalayana HOM05D000169 ORTHO05D004780 1.3e-23 115.2 110 56.4
Cpa.g.sc379.1 Carica papaya HOM05D000169 ORTHO05D004780 1.1e-22 112.1 135 46.7
SEGI_02233 Sequoiadendron giganteum HOM05D000169 ORTHO05D004780 1.6e-21 108.2 169 36.7
Psat3g110240 Pisum sativum HOM05D005316 ORTHO05D017863 4.6e-21 106.7 74 67.6
Psat1g148040 Pisum sativum HOM05D005005 ORTHO05D006178 5.1e-20 103.2 78 67.9
BcaB07g30448 Brassica carinata HOM05D000169 ORTHO05D004780 3.7e-18 97.1 80 66.2
BcaB07g30450 Brassica carinata HOM05D000169 ORTHO05D004780 9.1e-17 92.4 78 65.4
Lsat_1_v5_gn_9_96380 Lactuca sativa HOM05D012938 ORTHO05D004780 2.9e-15 87.4 101 49.5
Psat5g199840 Pisum sativum HOM05D000518 ORTHO05D000737 2.9e-15 87.4 67 65.7
SHI18050 Sapria himalayana HOM05D000169 ORTHO05D004780 3.8e-15 87.0 125 38.4
Lsat_1_v5_gn_3_30240 Lactuca sativa HOM05D000169 ORTHO05D004780 4.2e-14 83.6 58 74.1
Psat5g199760 Pisum sativum HOM05D000518 ORTHO05D000737 1.8e-12 78.2 57 66.7
BcaB07g30452 Brassica carinata HOM05D000169 ORTHO05D004780 2.3e-12 77.8 79 60.8
SEGI_33714 Sequoiadendron giganteum HOM05D000169 ORTHO05D384740 3.9e-12 77.0 195 32.3
Psat5g204480 Pisum sativum HOM05D000518 ORTHO05D000737 8.8e-12 75.9 57 64.9
ATR0315G090 Amborella trichopoda HOM05D000169 ORTHO05D004780 2.6e-11 74.3 119 42.9
Pp3s155_30 Physcomitrium patens HOM05D000169 ORTHO05D001214 2.2e-10 71.2 327 21.7
HPP92_024637 Vanilla planifolia HOM05D000169 ORTHO05D004780 2.8e-10 70.9 86 45.3
Lj1A998T45 Lonicera japonica HOM05D000169 ORTHO05D004437 8.2e-10 69.3 363 23.7
CBR_g41790 Chara braunii HOM05D002985 ORTHO05D003335 1.1e-09 68.9 77 42.9
Nitab4.5_0001227g0010 Nicotiana tabacum HOM05D000169 ORTHO05D004780 1.1e-09 68.9 197 29.4
Cre13.g586000 Chlamydomonas reinhardtii HOM05D000169 ORTHO05D004780 2.4e-09 67.8 124 33.9
Lalb_Chr03g0034601 Lupinus albus HOM05D000169 ORTHO05D004437 2.4e-09 67.8 322 22.7
SEGI_14736 Sequoiadendron giganteum HOM05D000169 ORTHO05D004780 2.4e-09 67.8 176 28.4
ATR0680G178 Amborella trichopoda HOM05D000169 ORTHO05D004437 5.3e-09 66.6 321 23.7
Lalb_Chr19g0130791 Lupinus albus HOM05D000169 ORTHO05D004437 2.6e-08 64.3 372 21.0
Manes.11G071800 Manihot esculenta HOM05D000169 ORTHO05D001214 7.7e-08 62.8 239 24.3
HanXRQChr09g0253691 Helianthus annuus HOM05D000169 ORTHO05D004437 1.0e-07 62.4 313 23.6
Lsat_1_v5_gn_9_55680 Lactuca sativa HOM05D000169 ORTHO05D004437 2.2e-07 61.2 326 22.7
SEGI_38824 Sequoiadendron giganteum HOM05D000169 ORTHO05D385241 8.5e-07 59.3 74 43.2
Medtr2g105570 Medicago truncatula HOM05D000169 ORTHO05D001214 1.9e-06 58.2 335 22.1
HPP92_025726 Vanilla planifolia HOM05D000169 ORTHO05D004437 1.9e-06 58.2 330 22.7
Lalb_Chr13g0300301 Lupinus albus HOM05D000169 ORTHO05D001214 4.2e-06 57.0 241 24.9
Cc04_g05510 Coffea canephora HOM05D000169 ORTHO05D001214 5.5e-06 56.6 238 23.1
ECA232G0402 Erigeron canadensis HOM05D000169 ORTHO05D004437 5.5e-06 56.6 294 23.8
HanXRQChr09g0274301 Helianthus annuus HOM05D000169 ORTHO05D001214 5.5e-06 56.6 333 22.2
Psat7g263280 Pisum sativum HOM05D000169 ORTHO05D001214 7.2e-06 56.2 240 23.3
Manes.04G095300 Manihot esculenta HOM05D000169 ORTHO05D001214 9.4e-06 55.8 243 21.8
Medtr4g005750 Medicago truncatula HOM05D000169 ORTHO05D001214 9.4e-06 55.8 244 22.1
SHI18049 Sapria himalayana HOM05D000169 ORTHO05D366061 9.4e-06 55.8 33 66.7


User provided reference genes

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