Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033388.1 Olea europaea HOM05D005710 ORTHO05D004657 1.2e-80 303.1 155 100.0
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 3.0e-47 192.2 167 64.1
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 3.4e-27 125.6 183 44.8
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 7.6e-27 124.4 178 46.1
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 6.2e-21 104.8 165 40.6
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 2.6e-19 99.4 173 39.9
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 1.0e-18 97.4 175 40.0
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 1.7e-18 96.7 181 39.8
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 1.7e-18 96.7 174 40.2
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 5.0e-18 95.1 165 40.0
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 2.5e-17 92.8 160 42.5
Oeu000861.1 Olea europaea HOM05D005710 ORTHO05D004657 2.1e-16 89.7 161 41.0
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 2.7e-16 89.4 180 36.7
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 1.0e-15 87.4 174 36.8
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 1.8e-15 86.7 183 39.9
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 1.8e-15 86.7 179 37.4
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 3.3e-14 82.4 185 32.4
SalBow7G3425 Salvia bowleyana HOM05D005710 ORTHO05D004657 3.3e-14 82.4 178 38.2
Migut.K01286 Erythranthe guttata HOM05D005710 ORTHO05D004657 4.3e-14 82.0 168 39.3
Migut.K01288 Erythranthe guttata HOM05D005710 ORTHO05D004657 4.3e-14 82.0 167 38.9
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 1.6e-13 80.1 168 36.3
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 4.8e-13 78.6 173 35.3
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 6.3e-13 78.2 181 34.3
CAN.G206.216 Capsicum annuum HOM05D005710 ORTHO05D004657 8.2e-13 77.8 165 35.2
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 1.1e-12 77.4 174 33.9
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 1.4e-12 77.0 169 35.5
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 2.4e-12 76.3 189 37.6
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 4.1e-12 75.5 175 34.3
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 6.9e-12 74.7 169 35.5
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 6.9e-12 74.7 186 34.4
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 6.9e-12 74.7 181 35.4
CAN.G206.210 Capsicum annuum HOM05D005710 ORTHO05D004657 9.0e-12 74.3 165 33.9
Lj4P116T76 Lonicera japonica HOM05D005710 ORTHO05D004657 9.0e-12 74.3 159 38.4
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.2e-11 73.9 188 33.5
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 3.4e-11 72.4 184 33.2
SalBow3G1747 Salvia bowleyana HOM05D005710 ORTHO05D004657 3.4e-11 72.4 150 36.7
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 4.5e-11 72.0 146 37.0
Cc07_g04040 Coffea canephora HOM05D005710 ORTHO05D004657 5.9e-11 71.6 164 34.1
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 7.7e-11 71.2 187 35.8
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 2.2e-10 69.7 179 34.1
HanXRQChr15g0473071 Helianthus annuus HOM05D005710 ORTHO05D004657 2.2e-10 69.7 128 38.3
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 2.9e-10 69.3 179 33.5
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 3.8e-10 68.9 168 33.3
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 3.8e-10 68.9 169 36.1
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 3.8e-10 68.9 187 34.2
SGA_v2.0_scaffold52G19180 Striga asiatica HOM05D005710 ORTHO05D004657 5.0e-10 68.6 165 32.7
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 1.1e-09 67.4 179 33.0
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 1.1e-09 67.4 179 33.0
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 1.9e-09 66.6 169 35.5
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 4.2e-09 65.5 160 35.6
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 5.5e-09 65.1 189 30.7
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 9.4e-09 64.3 158 36.1
SGA_v2.0_scaffold4G02406 Striga asiatica HOM05D005710 ORTHO05D004657 2.1e-08 63.2 151 30.5
Nitab4.5_0000565g0150 Nicotiana tabacum HOM05D005710 ORTHO05D004657 1.8e-07 60.1 122 36.9
PGSC0003DMG400001447 Solanum tuberosum HOM05D005710 ORTHO05D004657 5.1e-07 58.5 137 34.3
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 6.7e-07 58.2 177 28.8
GSVIVG01011503001 Vitis vinifera HOM05D005710 ORTHO05D004657 6.7e-07 58.2 53 54.7
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 2.5e-06 56.2 180 30.0
Nn4g23370 Nelumbo nucifera HOM05D005710 ORTHO05D004657 2.5e-06 56.2 190 29.5
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 2.5e-06 56.2 178 25.3
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 3.3e-06 55.8 173 29.5
Nitab4.5_0008213g0040 Nicotiana tabacum HOM05D005710 ORTHO05D004657 4.3e-06 55.5 161 31.7


User provided reference genes

Program Settings