Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 3.1e-295 1017.7 506 100.0
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 1.7e-208 729.6 511 73.2
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 4.8e-195 684.9 513 68.0
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 1.2e-193 680.2 492 69.5
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 2.6e-193 679.1 514 67.9
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 4.5e-193 678.3 511 68.1
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 7.6e-193 677.6 492 69.5
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 1.0e-192 677.2 513 67.3
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 1.2e-190 670.2 511 66.5
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 2.7e-190 669.1 492 68.7
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 6.0e-190 667.9 516 65.9
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 6.0e-190 667.9 505 67.3
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 6.0e-190 667.9 497 69.0
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 1.9e-188 662.9 504 67.7
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 8.2e-187 657.5 509 66.8
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 8.2e-187 657.5 504 65.7
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 8.2e-187 657.5 463 70.4
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 1.1e-186 657.1 519 67.1
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 5.8e-185 651.4 512 63.7
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 5.8e-185 651.4 519 66.1
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 1.7e-184 649.8 506 65.4
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.7e-184 649.8 463 70.0
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 8.4e-184 647.5 450 70.2
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 1.1e-183 647.1 512 63.3
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 4.2e-183 645.2 531 65.0
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 7.1e-183 644.4 494 67.2
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 9.3e-183 644.0 506 64.2
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 1.9e-180 636.3 459 70.4
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 2.5e-180 636.0 450 69.6
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 2.5e-180 636.0 495 64.8
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 1.1e-178 630.6 474 65.6
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 1.1e-178 630.6 517 63.4
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 4.1e-178 628.6 528 64.8
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 2.0e-177 626.3 486 64.6
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 2.6e-177 625.9 482 66.0
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 6.5e-176 621.3 439 70.2
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 1.1e-175 620.5 463 67.2
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 1.1e-175 620.5 478 63.4
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 9.4e-175 617.5 543 60.2
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 1.2e-174 617.1 455 65.9
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 2.1e-174 616.3 444 70.0
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 3.6e-174 615.5 488 63.7
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 1.0e-173 614.0 463 67.0
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 1.1e-172 610.5 515 62.5
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 1.3e-171 607.1 479 62.6
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 4.8e-171 605.1 513 62.6
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 5.3e-170 601.7 475 63.2
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 1.2e-169 600.5 475 63.8
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 3.8e-168 595.5 452 67.7
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 5.0e-168 595.1 449 67.7
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 1.9e-167 593.2 451 67.2
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 4.7e-166 588.6 495 60.8
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 7.9e-166 587.8 479 60.5
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 7.9e-166 587.8 512 59.4
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 8.8e-165 584.3 473 60.7
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 5.7e-164 581.6 509 61.1
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 5.7e-164 581.6 538 56.5
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 1.3e-163 580.5 474 62.9
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 1.4e-162 577.0 488 62.7
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 2.4e-162 576.2 563 57.2
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 2.0e-161 573.2 478 61.5
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.0e-161 573.2 544 56.4
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 1.0e-160 570.9 481 60.7
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 1.7e-160 570.1 484 60.7
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 1.1e-159 567.4 475 62.7
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 7.2e-159 564.7 449 63.3
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.6e-158 563.5 511 60.5
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 2.7e-158 562.8 517 58.0
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 3.6e-158 562.4 479 60.5
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 3.6e-158 562.4 555 56.4
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 1.5e-156 557.0 444 64.0
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 1.3e-155 553.9 475 60.2
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 1.3e-155 553.9 507 57.6
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 2.8e-155 552.7 457 62.1
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 3.1e-154 549.3 436 64.9
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 4.1e-154 548.9 458 61.4
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 9.1e-154 547.7 477 59.7
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 2.6e-153 546.2 386 71.0
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.2e-152 543.1 544 54.6
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.2e-150 537.3 512 56.1
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 6.1e-150 535.0 457 61.1
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.8e-149 533.5 382 70.7
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 1.2e-148 530.8 459 61.0
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 1.7e-147 526.9 513 58.9
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 6.5e-144 515.0 589 50.1
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 1.1e-143 514.2 414 63.8
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 1.5e-143 513.8 458 62.2
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 9.4e-143 511.1 486 56.6
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 3.5e-137 492.7 430 59.8
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 1.4e-133 480.7 405 61.5
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 2.2e-131 473.4 403 60.5
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 2.3e-128 463.4 453 50.3
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 2.5e-127 459.9 455 52.3
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 5.6e-127 458.8 357 64.7
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 1.6e-126 457.2 439 52.8
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 1.2e-121 441.0 457 54.3
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 2.6e-116 423.3 356 62.1
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 2.7e-113 413.3 482 45.0
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 4.0e-109 399.4 451 48.8
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 1.2e-108 397.9 339 61.9
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 2.1e-105 387.1 316 65.2
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 9.9e-92 341.7 295 61.7
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 8.7e-80 302.0 194 74.2
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 9.0e-77 292.0 188 73.4
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 2.1e-73 280.8 254 54.7
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.9e-71 274.2 270 58.1
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 2.9e-67 260.4 295 51.9
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 1.3e-59 235.0 243 55.6
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 1.7e-54 218.0 216 55.1
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.7e-43 181.4 130 67.7
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 2.7e-41 174.1 145 63.4
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 6.7e-40 169.5 293 37.2
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 2.2e-38 164.5 124 60.5
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 7.0e-37 159.5 142 57.7
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 7.7e-36 156.0 154 51.9
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 1.4e-32 145.2 236 38.6
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 8.8e-32 142.5 134 56.7
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 8.8e-32 142.5 92 66.3
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 1.8e-29 134.8 327 34.3
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 1.3e-27 128.6 112 58.0
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 1.5e-23 115.2 103 57.3
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 1.1e-21 109.0 482 26.8
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 3.5e-20 104.0 96 57.3
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 1.7e-19 101.7 256 31.2
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.1e-17 94.7 53 81.1
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.0e-15 88.2 48 83.3
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 2.2e-14 84.7 282 26.6
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 2.2e-14 84.7 53 73.6
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 3.2e-13 80.9 109 45.0
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 4.1e-13 80.5 124 39.5
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 5.9e-12 76.6 52 61.5
Peaxi162Scf00781g00210 Petunia axillaris HOM05D002474 ORTHO05D006727 2.3e-11 74.7 52 59.6
PRCOL_00006911 Prasinoderma coloniale HOM05D002474 ORTHO05D006727 5.6e-10 70.1 487 23.8
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 4.7e-09 67.0 34 88.2
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 1.8e-08 65.1 34 85.3
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 1.7e-06 58.5 49 57.1


User provided reference genes

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