Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 2.4e-218 761.9 397 100.0
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 9.1e-133 477.6 403 68.5
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 1.7e-118 430.3 408 62.0
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 4.8e-118 428.7 418 60.8
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 8.3e-118 427.9 397 64.2
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 4.1e-117 425.6 389 65.6
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 2.0e-111 406.8 401 62.1
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 3.4e-111 406.0 400 62.0
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.8e-111 404.4 399 61.2
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 2.8e-110 402.9 401 62.8
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 2.0e-108 396.7 396 62.1
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 2.0e-108 396.7 399 60.7
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 3.5e-108 396.0 400 61.0
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 5.9e-108 395.2 398 61.1
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 1.3e-107 394.0 399 60.4
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 1.3e-107 394.0 404 61.1
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 1.7e-107 393.7 400 59.5
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.9e-107 392.9 399 59.9
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 8.6e-107 391.3 400 60.2
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.1e-106 391.0 399 59.6
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 3.6e-105 386.0 404 60.1
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 6.1e-105 385.2 389 60.2
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 8.9e-104 381.3 388 61.3
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 1.2e-103 380.9 399 58.9
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.5e-103 380.6 396 60.9
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 5.7e-103 378.6 400 58.8
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.8e-101 373.6 377 59.9
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 2.7e-100 369.8 417 55.6
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 3.5e-100 369.4 414 58.7
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 7.8e-100 368.2 409 56.5
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 3.9e-99 365.9 406 55.7
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 3.9e-99 365.9 405 56.8
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 6.6e-99 365.2 399 58.1
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.5e-98 364.0 399 57.6
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 2.5e-98 363.2 417 55.6
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 1.6e-97 360.5 401 57.1
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 4.7e-97 359.0 384 60.7
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 6.1e-97 358.6 402 57.0
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 8.0e-97 358.2 403 56.1
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 1.0e-96 357.8 407 55.5
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 1.4e-96 357.5 380 57.9
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 3.1e-96 356.3 426 54.7
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 3.1e-96 356.3 401 55.9
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 1.2e-95 354.4 402 55.5
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 2.6e-95 353.2 393 57.5
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 3.4e-95 352.8 337 65.6
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 9.8e-95 351.3 414 56.3
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.7e-94 350.5 376 56.9
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 8.3e-94 348.2 369 59.3
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 8.3e-94 348.2 400 55.2
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.1e-93 347.8 330 64.2
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 1.9e-93 347.1 397 57.7
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 9.2e-93 344.7 404 54.7
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 4.6e-92 342.4 378 56.6
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 1.7e-91 340.5 402 54.5
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 8.6e-91 338.2 400 54.5
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.1e-90 337.8 402 54.2
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.1e-90 337.8 402 54.2
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 2.5e-90 336.7 402 54.0
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.3e-90 336.3 328 61.3
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 4.3e-90 335.9 408 53.2
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.1e-89 333.6 392 55.4
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 3.6e-89 332.8 406 52.5
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 1.1e-88 331.3 402 54.0
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 3.4e-87 326.2 407 52.3
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 3.4e-87 326.2 399 52.4
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 2.9e-86 323.2 446 50.4
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 3.7e-86 322.8 395 53.4
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 8.3e-86 321.6 389 53.7
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 3.2e-85 319.7 393 53.2
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 7.8e-84 315.1 431 50.1
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 3.9e-83 312.8 408 52.7
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 6.6e-83 312.0 415 51.1
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 1.1e-82 311.2 405 50.9
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 1.1e-82 311.2 363 56.7
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 4.7e-81 305.8 400 51.5
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 3.1e-80 303.1 336 56.8
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.5e-79 300.8 395 51.4
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 2.6e-79 300.1 330 58.5
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 3.4e-79 299.7 402 51.2
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 8.3e-78 295.0 393 49.9
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 8.3e-78 295.0 425 48.9
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 2.7e-76 290.0 378 50.8
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 6.6e-75 285.4 385 49.9
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 2.1e-73 280.4 401 48.4
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 4.0e-72 276.2 306 56.5
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 8.9e-72 275.0 413 48.2
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 1.2e-71 274.6 346 52.6
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 2.0e-71 273.9 396 48.0
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.0e-71 273.9 420 47.9
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 8.4e-70 268.5 399 46.9
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 2.1e-65 253.8 280 59.6
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.1e-64 251.5 385 45.7
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 4.6e-52 209.5 273 52.4
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.3e-51 207.2 172 70.9
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 3.0e-51 206.8 327 43.4
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 8.7e-51 205.3 351 43.9
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 1.3e-49 201.4 400 40.5
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 6.2e-49 199.1 437 38.0
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.1e-48 198.4 391 40.4
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 1.2e-47 194.9 312 44.2
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 7.6e-47 192.2 195 62.6
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.4e-45 188.0 303 43.2
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 1.7e-38 164.5 203 49.3
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 9.3e-37 158.7 129 70.5
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 7.9e-36 155.6 382 34.8
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.8e-35 154.5 185 50.3
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 1.3e-25 121.7 212 46.2
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 1.4e-24 118.2 170 50.0
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 4.1e-24 116.7 170 49.4
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 2.5e-21 107.5 67 86.6
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 7.2e-21 105.9 62 87.1
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.4e-16 91.7 138 53.6
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 2.0e-15 87.8 67 68.7
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 1.0e-14 85.5 336 30.1
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 1.5e-13 81.6 95 55.8
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 2.1e-12 77.8 328 31.1
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 5.7e-10 69.7 142 33.8
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.3e-09 68.6 48 64.6
TPR.G34759 Trifolium pratense HOM05D006889 ORTHO05D008614 5.0e-06 56.6 104 34.6
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 6.5e-06 56.2 35 62.9


User provided reference genes

Program Settings