Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033136.1 Olea europaea HOM05D004268 ORTHO05D004958 9.2e-16 87.0 106 100.0
Migut.N02326 Erythranthe guttata HOM05D004268 ORTHO05D004958 3.1e-11 72.0 38 92.1
QL01p004491 Quercus lobata HOM05D004268 ORTHO05D004958 3.4e-10 68.6 39 82.1
Manes.14G003500 Manihot esculenta HOM05D004268 ORTHO05D004958 4.4e-10 68.2 41 85.4
SGA_v2.0_scaffold3G01494 Striga asiatica HOM05D004268 ORTHO05D004958 4.4e-10 68.2 38 81.6
CiPaw.14G118100 Carya illinoinensis HOM05D004268 ORTHO05D004958 7.6e-10 67.4 40 80.0
Glyma.15G275600 Glycine max HOM05D004268 ORTHO05D004958 7.6e-10 67.4 38 84.2
Prupe.4G250700 Prunus persica HOM05D004268 ORTHO05D004958 7.6e-10 67.4 40 80.0
QL01p004584 Quercus lobata HOM05D004268 ORTHO05D004958 7.6e-10 67.4 39 79.5
Actinidia23976 Actinidia chinensis HOM05D004268 ORTHO05D004958 9.9e-10 67.0 37 81.1
Oeu063326.1 Olea europaea HOM05D004268 ORTHO05D004958 1.3e-09 66.6 106 52.8
Hma1.2p1_0368F.1_g137310 Hydrangea macrophylla HOM05D004268 ORTHO05D004958 1.7e-09 66.2 38 81.6
DCAR_029953 Daucus carota HOM05D004268 ORTHO05D004958 2.2e-09 65.9 40 80.0
Duzib150G0004 Durio zibethinus HOM05D004268 ORTHO05D004958 2.2e-09 65.9 40 77.5
MD11G1191900 Malus domestica HOM05D004268 ORTHO05D004958 2.9e-09 65.5 40 77.5
FAN21G1561 Fragaria x ananassa HOM05D004268 ORTHO05D004958 3.8e-09 65.1 39 76.9
Glyma.10G089500 Glycine max HOM05D004268 ORTHO05D004958 3.8e-09 65.1 39 76.9
Glyma.15G275700 Glycine max HOM05D004268 ORTHO05D004958 3.8e-09 65.1 38 81.6
Rhsim01G0192200 Rhododendron simsii HOM05D004268 ORTHO05D004958 3.8e-09 65.1 37 81.1
Haze_23147 Corylus avellana HOM05D004268 ORTHO05D004958 4.9e-09 64.7 40 80.0
CANSAT54G2544 Cannabis sativa HOM05D004268 ORTHO05D004958 6.4e-09 64.3 38 81.6
Duzib168G1465 Durio zibethinus HOM05D004268 ORTHO05D004958 6.4e-09 64.3 40 75.0
MD03G1173700 Malus domestica HOM05D004268 ORTHO05D004958 6.4e-09 64.3 40 75.0
COL.COLO4_06120 Corchorus olitorius HOM05D004268 ORTHO05D004958 8.4e-09 63.9 40 75.0
TWI32G0064 Tripterygium wilfordii HOM05D004268 ORTHO05D004958 1.1e-08 63.5 37 81.1
Atru.chr3.2699 Acer truncatum HOM05D004268 ORTHO05D004958 1.4e-08 63.2 40 75.0
EL10Ac4g10238 Beta vulgaris HOM05D004268 ORTHO05D004958 1.4e-08 63.2 37 78.4
FvH4_3g28710 Fragaria vesca HOM05D004268 ORTHO05D004958 1.4e-08 63.2 40 75.0
FAN11G3362 Fragaria x ananassa HOM05D004268 ORTHO05D004958 1.4e-08 63.2 40 75.0
FAN16G2720 Fragaria x ananassa HOM05D004268 ORTHO05D004958 1.4e-08 63.2 40 75.0
FAN25G2913 Fragaria x ananassa HOM05D004268 ORTHO05D004958 1.4e-08 63.2 40 75.0
Gohir.A09G113900 Gossypium hirsutum HOM05D004268 ORTHO05D004958 1.4e-08 63.2 41 80.5
Gohir.D09G110500 Gossypium hirsutum HOM05D004268 ORTHO05D004958 1.4e-08 63.2 41 80.5
Peaxi162Scf00032g00063 Petunia axillaris HOM05D004268 ORTHO05D004958 1.4e-08 63.2 41 80.5
Potri.009G052500 Populus trichocarpa HOM05D004268 ORTHO05D004958 1.4e-08 63.2 41 75.6
RcHm_v2.0_Chr5g0052351 Rosa chinensis HOM05D004268 ORTHO05D004958 1.4e-08 63.2 40 75.0
Sed0025860 Sechium edule HOM05D004268 ORTHO05D004958 1.4e-08 63.2 40 80.0
TWI34G1192 Tripterygium wilfordii HOM05D004268 ORTHO05D004958 1.4e-08 63.2 38 78.9
Cpa.g.sc84.45 Carica papaya HOM05D004268 ORTHO05D004958 1.9e-08 62.8 35 82.9
Psat7g196400 Pisum sativum HOM05D004268 ORTHO05D004958 1.9e-08 62.8 38 78.9
CSS0050517 Camellia sinensis var. sinensis HOM05D004268 ORTHO05D004958 2.4e-08 62.4 39 74.4
CiPaw.13G159300 Carya illinoinensis HOM05D004268 ORTHO05D004958 2.4e-08 62.4 41 75.6
Duzib133G0767 Durio zibethinus HOM05D004268 ORTHO05D004958 2.4e-08 62.4 39 74.4
Lj3g0003624 Lotus japonicus HOM05D004268 ORTHO05D004958 2.4e-08 62.4 36 77.8
PSO541G0301 Papaver somniferum HOM05D004268 ORTHO05D004958 2.4e-08 62.4 40 77.5
Ah.06g194080 Amaranthus hybridus HOM05D004268 ORTHO05D004958 3.2e-08 62.0 40 75.0
Glyma.10G089300 Glycine max HOM05D004268 ORTHO05D004958 3.2e-08 62.0 36 77.8
Lsat_1_v5_gn_6_25460 Lactuca sativa HOM05D004268 ORTHO05D004958 3.2e-08 62.0 42 76.2
Peaxi162Scf00032g00064 Petunia axillaris HOM05D004268 ORTHO05D004958 3.2e-08 62.0 39 74.4
Cfa009783 Carpinus fangiana HOM05D004268 ORTHO05D004958 4.1e-08 61.6 41 78.0
DCAR_002077 Daucus carota HOM05D004268 ORTHO05D004958 4.1e-08 61.6 40 75.0
DCAR_031628 Daucus carota HOM05D004268 ORTHO05D004958 4.1e-08 61.6 40 75.0
TPR.G35302 Trifolium pratense HOM05D004268 ORTHO05D004958 4.1e-08 61.6 39 82.1
Cpa.g.sc125.13 Carica papaya HOM05D004268 ORTHO05D004958 5.4e-08 61.2 38 76.3
MELO3C014587.2 Cucumis melo HOM05D004268 ORTHO05D004958 5.4e-08 61.2 40 75.0
Aa31LG10G3570 Aethionema arabicum HOM05D004268 ORTHO05D004958 7.1e-08 60.8 39 76.9
AL1G59250 Arabidopsis lyrata HOM05D004268 ORTHO05D004958 7.1e-08 60.8 39 79.5
CARHR041550 Cardamine hirsuta HOM05D004268 ORTHO05D004958 7.1e-08 60.8 39 79.5
Lalb_Chr01g0000351 Lupinus albus HOM05D004268 ORTHO05D004958 7.1e-08 60.8 36 77.8
TAR633G1399 Trochodendron aralioides HOM05D004268 ORTHO05D004958 7.1e-08 60.8 38 76.3
CAN.G821.8 Capsicum annuum HOM05D004268 ORTHO05D004958 9.2e-08 60.5 40 75.0
Ciclev10017247m.g Citrus clementina HOM05D004268 ORTHO05D004958 9.2e-08 60.5 42 73.8
Gohir.A08G143800 Gossypium hirsutum HOM05D004268 ORTHO05D004958 9.2e-08 60.5 38 84.2
Gohir.D08G164800 Gossypium hirsutum HOM05D004268 ORTHO05D004958 9.2e-08 60.5 38 84.2
Gorai.004G171800 Gossypium raimondii HOM05D004268 ORTHO05D004958 9.2e-08 60.5 38 84.2
Manes.06G163500 Manihot esculenta HOM05D004268 ORTHO05D004958 9.2e-08 60.5 41 75.6
Potri.001G256900 Populus trichocarpa HOM05D004268 ORTHO05D004958 9.2e-08 60.5 41 73.2
ClCG02G023150 Citrullus lanatus HOM05D004268 ORTHO05D004958 1.2e-07 60.1 40 75.0
HanXRQChr02g0052031 Helianthus annuus HOM05D004268 ORTHO05D004958 1.2e-07 60.1 40 75.0
Sed0017781 Sechium edule HOM05D004268 ORTHO05D004958 1.2e-07 60.1 38 76.3
AT1G51400 Arabidopsis thaliana HOM05D004268 ORTHO05D004958 1.6e-07 59.7 39 76.9
Lj3g0019333 Lotus japonicus HOM05D004268 ORTHO05D004958 1.6e-07 59.7 38 76.3
Solyc01g008510.3 Solanum lycopersicum HOM05D004268 ORTHO05D004958 1.6e-07 59.7 38 76.3
Thecc.01G409600 Theobroma cacao HOM05D004268 ORTHO05D004958 1.6e-07 59.7 38 76.3
Sopen01g004050 Solanum pennellii HOM05D004268 ORTHO05D004958 2.1e-07 59.3 38 73.7
BcaC08g43309 Brassica carinata HOM05D004268 ORTHO05D004958 2.7e-07 58.9 40 75.0
A06p02510 Brassica napus HOM05D004268 ORTHO05D004958 2.7e-07 58.9 40 75.0
C06p06560 Brassica napus HOM05D004268 ORTHO05D004958 2.7e-07 58.9 40 75.0
BolC6t35768H Brassica oleracea HOM05D004268 ORTHO05D004958 2.7e-07 58.9 40 75.0
BraA06t23458Z Brassica rapa HOM05D004268 ORTHO05D004958 2.7e-07 58.9 40 75.0
TPR.G3668 Trifolium pratense HOM05D004268 ORTHO05D004958 2.7e-07 58.9 36 75.0
Psat5g208760 Pisum sativum HOM05D004268 ORTHO05D004958 3.5e-07 58.5 40 77.5
Aqoxy1G00277 Aquilegia oxysepala HOM05D004268 ORTHO05D004958 4.6e-07 58.2 40 72.5
AUR62000132 Chenopodium quinoa HOM05D004268 ORTHO05D004958 4.6e-07 58.2 38 76.3
AUR62019312 Chenopodium quinoa HOM05D004268 ORTHO05D004958 4.6e-07 58.2 38 76.3
Cc06_g23280 Coffea canephora HOM05D004268 ORTHO05D004958 4.6e-07 58.2 42 73.8
Thhalv10011883m.g Eutrema salsugineum HOM05D004268 ORTHO05D004958 4.6e-07 58.2 39 74.4
Medtr3g030850 Medicago truncatula HOM05D004268 ORTHO05D004958 4.6e-07 58.2 37 81.1
Sp1g38070 Schrenkiella parvula HOM05D004268 ORTHO05D004958 4.6e-07 58.2 39 74.4
Sc09g0000770 Simmondsia chinensis HOM05D004268 ORTHO05D004958 4.6e-07 58.2 41 75.6
THA.LOC104817911 Tarenaya hassleriana HOM05D004268 ORTHO05D004958 6.0e-07 57.8 40 72.5
Thecc.09G235200 Theobroma cacao HOM05D004268 ORTHO05D004958 6.0e-07 57.8 41 70.7
Nitab4.5_0004741g0020 Nicotiana tabacum HOM05D004268 ORTHO05D004958 7.8e-07 57.4 41 73.2
PGR102G2953 Punica granatum HOM05D004268 ORTHO05D004958 7.8e-07 57.4 39 71.8
QL04p008292 Quercus lobata HOM05D004268 ORTHO05D004958 7.8e-07 57.4 36 72.2
unitig_8.g2993 Utricularia gibba HOM05D004268 ORTHO05D004958 1.0e-06 57.0 36 75.0
Nn2g15305 Nelumbo nucifera HOM05D004268 ORTHO05D004958 1.3e-06 56.6 103 35.9
Nn7g36237 Nelumbo nucifera HOM05D004268 ORTHO05D004958 1.3e-06 56.6 39 66.7
Nn7g36238 Nelumbo nucifera HOM05D004268 ORTHO05D004958 1.3e-06 56.6 39 66.7
VMungo1127G0621 Vigna mungo HOM05D004268 ORTHO05D004958 1.3e-06 56.6 38 71.1
Migut.D00609 Erythranthe guttata HOM05D004268 ORTHO05D004958 2.3e-06 55.8 39 74.4
Nitab4.5_0002741g0110 Nicotiana tabacum HOM05D004268 ORTHO05D004958 2.3e-06 55.8 38 76.3
ECA233G4176 Erigeron canadensis HOM05D004268 ORTHO05D004958 3.0e-06 55.5 39 74.4
Medtr4g037505 Medicago truncatula HOM05D004268 ORTHO05D004958 3.0e-06 55.5 37 75.7
TAR623G0940 Trochodendron aralioides HOM05D004268 ORTHO05D004958 3.0e-06 55.5 38 68.4
CARHR096900 Cardamine hirsuta HOM05D004268 ORTHO05D004958 3.9e-06 55.1 38 73.7
CDE05G0821 Ceratophyllum demersum HOM05D004268 ORTHO05D004958 3.9e-06 55.1 35 74.3
Duzib138G1697 Durio zibethinus HOM05D004268 ORTHO05D004958 3.9e-06 55.1 37 70.3
PGR119G0693 Punica granatum HOM05D004268 ORTHO05D004958 3.9e-06 55.1 41 63.4
Aa31LG8G7770 Aethionema arabicum HOM05D004268 ORTHO05D004958 5.1e-06 54.7 40 72.5
BcaC09g49044 Brassica carinata HOM05D004268 ORTHO05D004958 5.1e-06 54.7 40 70.0
HanXRQChr13g0401101 Helianthus annuus HOM05D004268 ORTHO05D004958 5.1e-06 54.7 40 72.5
Phvul.011G009700 Phaseolus vulgaris HOM05D004268 ORTHO05D004958 5.1e-06 54.7 38 71.1
PGSC0003DMG400010498 Solanum tuberosum HOM05D004268 ORTHO05D004958 5.1e-06 54.7 40 67.5
Peaxi162Scf00004g00263 Petunia axillaris HOM05D004268 ORTHO05D004958 6.6e-06 54.3 105 37.1
Hma1.2p1_0495F.1_g165730 Hydrangea macrophylla HOM05D004268 ORTHO05D004958 8.6e-06 53.9 36 66.7


User provided reference genes

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