Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 2.0e-245 852.8 753 100.0
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 8.3e-119 432.2 758 64.8
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 1.9e-91 341.3 723 61.7
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.7e-87 328.2 756 45.5
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.2e-85 322.0 758 54.5
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 2.3e-84 317.8 722 58.7
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 7.3e-83 312.8 756 59.1
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 9.6e-83 312.4 730 57.4
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 2.8e-82 310.8 757 48.9
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 3.6e-82 310.5 730 50.0
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 6.2e-82 309.7 737 53.7
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.4e-80 303.9 727 47.0
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.5e-80 303.5 727 51.0
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 9.9e-80 302.4 756 52.9
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.2e-79 301.2 751 51.4
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.8e-79 300.4 751 49.1
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 1.2e-77 295.4 726 53.0
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 1.0e-76 292.4 726 54.3
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.3e-76 291.2 743 59.9
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 3.9e-76 290.4 728 51.2
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 4.3e-75 287.0 748 43.9
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 3.7e-74 283.9 755 54.8
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 8.1e-74 282.7 726 51.4
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 8.1e-74 282.7 729 55.4
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.4e-73 282.0 751 52.3
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 3.1e-73 280.8 743 57.1
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 9.9e-72 275.8 728 53.3
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 3.8e-71 273.9 733 49.0
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 4.9e-71 273.5 749 42.2
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 1.8e-68 265.0 751 49.9
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 1.1e-67 262.3 727 48.1
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 2.8e-66 257.7 753 47.7
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 3.7e-66 257.3 686 60.5
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 1.1e-65 255.8 739 58.6
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 1.1e-65 255.8 749 52.9
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 4.0e-65 253.8 725 52.4
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 6.9e-65 253.1 747 50.5
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 9.0e-65 252.7 722 58.0
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 9.0e-65 252.7 758 54.7
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 1.5e-64 251.9 763 49.5
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 4.5e-64 250.4 760 57.8
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 7.6e-64 249.6 738 62.3
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 1.0e-63 249.2 728 48.9
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 6.5e-63 246.5 751 48.7
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 6.5e-63 246.5 466 51.3
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 8.4e-63 246.1 470 50.2
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 8.4e-63 246.1 470 50.2
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 7.1e-62 243.0 759 55.9
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 1.6e-61 241.9 461 47.5
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 1.8e-60 238.4 756 46.8
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 6.7e-60 236.5 751 45.4
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 8.2e-58 229.6 242 55.8
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.1e-57 229.2 244 53.3
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 9.0e-57 226.1 765 52.7
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 2.6e-56 224.6 441 51.7
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 2.6e-56 224.6 754 51.5
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 5.9e-56 223.4 753 44.4
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 2.9e-55 221.1 759 50.2
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 5.0e-55 220.3 755 54.0
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 6.5e-55 219.9 730 38.6
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 3.2e-54 217.6 757 49.5
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 9.3e-54 216.1 749 48.6
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 1.2e-53 215.7 474 43.2
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 7.9e-53 213.0 752 44.5
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 1.0e-52 212.6 747 49.8
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 1.3e-52 212.2 752 50.8
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 1.1e-51 209.1 735 53.6
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 7.4e-51 206.5 750 50.8
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 3.2e-46 191.0 747 41.6
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 9.4e-46 189.5 238 48.7
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 1.2e-45 189.1 412 43.9
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 1.4e-44 185.7 732 52.6
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 1.8e-44 185.3 486 42.6
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 6.7e-44 183.3 730 47.8
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 7.4e-43 179.9 745 43.5
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.8e-41 175.3 752 44.5
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 6.9e-41 173.3 731 51.2
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 5.9e-40 170.2 243 44.4
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 1.0e-39 169.5 751 51.4
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 2.5e-38 164.9 225 47.1
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 8.0e-37 159.8 239 45.2
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 1.4e-36 159.1 474 44.3
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 6.7e-36 156.8 742 49.3
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 8.8e-36 156.4 750 45.9
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.1e-35 156.0 276 38.4
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 1.1e-33 149.4 222 42.3
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 1.8e-33 148.7 454 39.6
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 3.1e-33 147.9 729 49.4
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 5.0e-31 140.6 245 39.2
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 1.1e-30 139.4 750 50.1
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 1.9e-30 138.7 738 48.8
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 2.1e-29 135.2 725 45.1
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 8.0e-29 133.3 236 41.1
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 4.4e-27 127.5 185 44.3
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 1.7e-26 125.6 693 50.1
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 3.7e-26 124.4 227 39.2
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 1.4e-25 122.5 485 36.5
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 2.4e-25 121.7 441 31.1
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 2.4e-25 121.7 281 34.2
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 7.0e-25 120.2 745 45.2
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 7.2e-22 110.2 253 31.2
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 9.4e-22 109.8 129 51.9
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 1.2e-21 109.4 116 56.9
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 7.5e-19 100.1 208 34.1
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 1.7e-15 89.0 371 54.7
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.5e-14 85.9 265 53.6
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 4.0e-12 77.8 106 46.2
CDE07G0223 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 9.8e-11 73.2 107 39.3
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 9.8e-11 73.2 101 42.6
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.3e-10 72.8 132 40.2
A03p32460 Brassica napus HOM05D003015 ORTHO05D024548 3.1e-09 68.2 94 52.1
BraA07t31256Z Brassica rapa HOM05D000793 ORTHO05D024548 4.1e-09 67.8 79 57.0
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 9.2e-09 66.6 103 45.6
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 2.0e-08 65.5 721 42.0
Sabra18G0029000 Salix brachista HOM05D006421 ORTHO05D008268 4.5e-08 64.3 67 46.3
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.9e-08 63.9 105 44.8


User provided reference genes

Program Settings