Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033092.1 Olea europaea HOM05D006062 ORTHO05D007613 1.3e-41 172.6 83 100.0
Nn1g02035 Nelumbo nucifera HOM05D006062 ORTHO05D007613 8.5e-25 116.7 56 98.2
Aqoxy3G02060 Aquilegia oxysepala HOM05D006062 ORTHO05D007613 1.5e-24 115.9 56 94.6
CDE02G0118 Ceratophyllum demersum HOM05D006062 ORTHO05D007613 1.5e-24 115.9 56 96.4
CDE02G0767 Ceratophyllum demersum HOM05D006062 ORTHO05D007613 1.5e-24 115.9 56 96.4
PGSC0003DMG400000569 Solanum tuberosum HOM05D006062 ORTHO05D007613 1.5e-24 115.9 59 89.8
MSTRG.26938 Avicennia marina HOM05D006062 ORTHO05D007613 2.5e-24 115.2 55 98.2
CAN.G303.70 Capsicum annuum HOM05D006062 ORTHO05D007613 3.2e-24 114.8 56 92.9
DCAR_014570 Daucus carota HOM05D006062 ORTHO05D007613 3.2e-24 114.8 59 89.8
Sabra19G0053200 Salix brachista HOM05D006062 ORTHO05D007613 3.2e-24 114.8 59 91.5
Solyc03g096850.4 Solanum lycopersicum HOM05D006062 ORTHO05D007613 3.2e-24 114.8 59 88.1
Sopen03g027600 Solanum pennellii HOM05D006062 ORTHO05D007613 3.2e-24 114.8 59 88.1
BcaC03g18534 Brassica carinata HOM05D006062 ORTHO05D007613 5.5e-24 114.0 56 96.4
BcaNung00424 Brassica carinata HOM05D006062 ORTHO05D007613 5.5e-24 114.0 56 96.4
C02p08780 Brassica napus HOM05D006062 ORTHO05D007613 5.5e-24 114.0 56 96.4
BolC2t06792H Brassica oleracea HOM05D006062 ORTHO05D007613 5.5e-24 114.0 56 96.4
BraA02t05361Z Brassica rapa HOM05D006062 ORTHO05D007613 5.5e-24 114.0 56 96.4
Carub.0006s1536 Capsella rubella HOM05D006062 ORTHO05D007613 5.5e-24 114.0 56 96.4
Thhalv10014045m.g Eutrema salsugineum HOM05D006062 ORTHO05D007613 5.5e-24 114.0 56 96.4
Atru.chr12.2018 Acer truncatum HOM05D006062 ORTHO05D007613 7.2e-24 113.6 55 96.4
A02p03960 Brassica napus HOM05D006062 ORTHO05D007613 7.2e-24 113.6 56 94.6
Migut.F00106 Erythranthe guttata HOM05D006062 ORTHO05D007613 7.2e-24 113.6 59 89.8
Potri.019G042600 Populus trichocarpa HOM05D006062 ORTHO05D007613 7.2e-24 113.6 56 94.6
SalBow4G0173 Salvia bowleyana HOM05D006062 ORTHO05D007613 7.2e-24 113.6 55 96.4
Peaxi162Scf01650g00050 Petunia axillaris HOM05D006062 ORTHO05D007613 9.4e-24 113.2 56 92.9
BcaC04g18827 Brassica carinata HOM05D006062 ORTHO05D007613 1.2e-23 112.8 72 80.6
CARHR196050 Cardamine hirsuta HOM05D006062 ORTHO05D007613 1.2e-23 112.8 56 94.6
Cpa.g.sc39.53 Carica papaya HOM05D006062 ORTHO05D007613 1.2e-23 112.8 55 96.4
Lalb_Chr05g0211331 Lupinus albus HOM05D006062 ORTHO05D007613 1.2e-23 112.8 59 91.5
Sp6g27050 Schrenkiella parvula HOM05D006062 ORTHO05D007613 1.2e-23 112.8 56 94.6
C09p60030 Brassica napus HOM05D006062 ORTHO05D007613 1.6e-23 112.5 56 94.6
CSS0001214 Camellia sinensis var. sinensis HOM05D006062 ORTHO05D007613 1.6e-23 112.5 55 96.4
LjContig00222g0021869 Lotus japonicus HOM05D006062 ORTHO05D007613 1.6e-23 112.5 55 96.4
Rhsim09G0211900 Rhododendron simsii HOM05D006062 ORTHO05D007613 1.6e-23 112.5 55 96.4
GSVIVG01024454001 Vitis vinifera HOM05D006062 ORTHO05D007613 1.6e-23 112.5 55 96.4
Aa31LG11G12480 Aethionema arabicum HOM05D006062 ORTHO05D007613 2.7e-23 111.7 55 96.4
ATR0829G005 Amborella trichopoda HOM05D006062 ORTHO05D007613 2.7e-23 111.7 56 92.9
AL6G28220 Arabidopsis lyrata HOM05D006062 ORTHO05D007613 2.7e-23 111.7 56 92.9
AT5G17170 Arabidopsis thaliana HOM05D006062 ORTHO05D007613 2.7e-23 111.7 56 92.9
MBI04_g27273_MAGBIO Magnolia biondii HOM05D006062 ORTHO05D007613 2.7e-23 111.7 55 94.5
TPR.G37875 Trifolium pratense HOM05D006062 ORTHO05D007613 2.7e-23 111.7 55 96.4
CANSAT21G2164 Cannabis sativa HOM05D006062 ORTHO05D007613 3.6e-23 111.3 55 94.5
Dinv29176 Davidia involucrata HOM05D006062 ORTHO05D007613 3.6e-23 111.3 55 94.5
Duzib106G1742 Durio zibethinus HOM05D006062 ORTHO05D007613 3.6e-23 111.3 55 94.5
Duzib177G0391 Durio zibethinus HOM05D006062 ORTHO05D007613 3.6e-23 111.3 55 94.5
Gohir.A02G139100 Gossypium hirsutum HOM05D006062 ORTHO05D007613 3.6e-23 111.3 55 94.5
Gohir.D03G049700 Gossypium hirsutum HOM05D006062 ORTHO05D007613 3.6e-23 111.3 55 94.5
Gorai.003G051200 Gossypium raimondii HOM05D006062 ORTHO05D007613 3.6e-23 111.3 55 94.5
Lsat_1_v5_gn_8_3801 Lactuca sativa HOM05D006062 ORTHO05D007613 3.6e-23 111.3 56 92.9
Mapoly0041s0075 Marchantia polymorpha HOM05D006062 ORTHO05D007613 3.6e-23 111.3 56 89.3
QL09p026245 Quercus lobata HOM05D006062 ORTHO05D007613 3.6e-23 111.3 55 94.5
Hund02967 Selenicereus undatus HOM05D006062 ORTHO05D007613 3.6e-23 111.3 55 94.5
SEGI_19152 Sequoiadendron giganteum HOM05D006062 ORTHO05D007613 3.6e-23 111.3 55 92.7
Sc25g0001120 Simmondsia chinensis HOM05D006062 ORTHO05D007613 3.6e-23 111.3 55 94.5
Actinidia28267 Actinidia chinensis HOM05D006062 ORTHO05D007613 4.7e-23 110.9 57 89.5
Eucgr.K00099 Eucalyptus grandis HOM05D006062 ORTHO05D007613 4.7e-23 110.9 55 92.7
Lj3A890T59 Lonicera japonica HOM05D006062 ORTHO05D007613 4.7e-23 110.9 55 94.5
Prupe.2G323500 Prunus persica HOM05D006062 ORTHO05D007613 4.7e-23 110.9 55 92.7
SGA_v2.0_scaffold18G08502 Striga asiatica HOM05D006062 ORTHO05D007613 4.7e-23 110.9 55 94.5
Ca_24458_v3 Cicer arietinum L. HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 94.5
Ca_24464_v3 Cicer arietinum L. HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 94.5
Ciclev10012505m.g Citrus clementina HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 94.5
CsaV3_5G005280 Cucumis sativus L. HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 94.5
HanXRQChr04g0105241 Helianthus annuus HOM05D006062 ORTHO05D007613 6.1e-23 110.5 56 91.1
Hma1.2p1_0758F.1_g213550 Hydrangea macrophylla HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 94.5
Hma1.2p1_0758F.1_g213560 Hydrangea macrophylla HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 94.5
Phvul.002G037500 Phaseolus vulgaris HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 94.5
Psat2g187840 Pisum sativum HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 94.5
TWI60G0061 Tripterygium wilfordii HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 94.5
TAR375G0226 Trochodendron aralioides HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 92.7
HPP92_025509 Vanilla planifolia HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 92.7
HPP92_025526 Vanilla planifolia HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 92.7
VMungo0720G1055 Vigna mungo HOM05D006062 ORTHO05D007613 6.1e-23 110.5 55 94.5
Actinidia18696 Actinidia chinensis HOM05D006062 ORTHO05D007613 8.0e-23 110.2 55 92.7
Cfa015906 Carpinus fangiana HOM05D006062 ORTHO05D007613 8.0e-23 110.2 55 92.7
COL.COLO4_08912 Corchorus olitorius HOM05D006062 ORTHO05D007613 8.0e-23 110.2 55 92.7
Haze_00586 Corylus avellana HOM05D006062 ORTHO05D007613 8.0e-23 110.2 55 92.7
MELO3C005432.2 Cucumis melo HOM05D006062 ORTHO05D007613 8.0e-23 110.2 55 92.7
Glyma.01G229800 Glycine max HOM05D006062 ORTHO05D007613 8.0e-23 110.2 55 92.7
Glyma.11G012700 Glycine max HOM05D006062 ORTHO05D007613 8.0e-23 110.2 55 92.7
Manes.08G164800 Manihot esculenta HOM05D006062 ORTHO05D007613 8.0e-23 110.2 55 92.7
Sed0000932 Sechium edule HOM05D006062 ORTHO05D007613 8.0e-23 110.2 55 92.7
AUR62005918 Chenopodium quinoa HOM05D006062 ORTHO05D007613 1.0e-22 109.8 55 92.7
AUR62028145 Chenopodium quinoa HOM05D006062 ORTHO05D007613 1.0e-22 109.8 55 92.7
Os08g0162600 Oryza sativa ssp. japonica HOM05D006062 ORTHO05D007613 1.0e-22 109.8 55 92.7
PSO063G5144 Papaver somniferum HOM05D006062 ORTHO05D007613 1.0e-22 109.8 55 92.7
PSO782G5695 Papaver somniferum HOM05D006062 ORTHO05D007613 1.0e-22 109.8 55 92.7
THA.LOC104820874 Tarenaya hassleriana HOM05D006062 ORTHO05D007613 1.0e-22 109.8 55 92.7
Thecc.05G207500 Theobroma cacao HOM05D006062 ORTHO05D007613 1.0e-22 109.8 55 90.9
A10p22220 Brassica napus HOM05D006062 ORTHO05D007613 1.4e-22 109.4 56 92.9
BraA10t44281Z Brassica rapa HOM05D006062 ORTHO05D007613 1.4e-22 109.4 56 92.9
FvH4_7g33550 Fragaria vesca HOM05D006062 ORTHO05D007613 1.4e-22 109.4 55 92.7
FAN01G1199 Fragaria x ananassa HOM05D006062 ORTHO05D007613 1.4e-22 109.4 55 92.7
EL10Ac3g05103 Beta vulgaris HOM05D006062 ORTHO05D007613 1.8e-22 109.0 55 92.7
ClCG01G005020 Citrullus lanatus HOM05D006062 ORTHO05D007613 1.8e-22 109.0 55 90.9
MD07G1305400 Malus domestica HOM05D006062 ORTHO05D007613 2.3e-22 108.6 55 90.9
Medtr5g008050 Medicago truncatula HOM05D006062 ORTHO05D007613 2.3e-22 108.6 55 92.7
RcHm_v2.0_Chr1g0383771 Rosa chinensis HOM05D006062 ORTHO05D007613 2.3e-22 108.6 55 90.9
Zm00001eb415470 Zea mays HOM05D006062 ORTHO05D007613 2.3e-22 108.6 55 92.7
CiPaw.06G020400 Carya illinoinensis HOM05D006062 ORTHO05D007613 3.0e-22 108.2 55 90.9
FAN10G2030 Fragaria x ananassa HOM05D006062 ORTHO05D007613 3.0e-22 108.2 55 90.9
FAN10G3926 Fragaria x ananassa HOM05D006062 ORTHO05D007613 3.0e-22 108.2 55 90.9
ECA233G2527 Erigeron canadensis HOM05D006062 ORTHO05D007613 4.0e-22 107.8 55 90.9
PGR142G0857 Punica granatum HOM05D006062 ORTHO05D007613 4.0e-22 107.8 55 92.7
unitig_52.g17697 Utricularia gibba HOM05D006062 ORTHO05D007613 4.0e-22 107.8 55 89.1
AagrBONN_evm.TU.Sc2ySwM_117.4047 Anthoceros agrestis HOM05D006062 ORTHO05D007613 5.2e-22 107.5 56 85.7
Cc02_g00440 Coffea canephora HOM05D006062 ORTHO05D007613 6.7e-22 107.1 54 90.7
CBR_g41688 Chara braunii HOM05D006062 ORTHO05D007613 1.5e-21 105.9 60 81.7
Cc11_g03890 Coffea canephora HOM05D006062 ORTHO05D007613 2.0e-21 105.5 56 89.3
SMO140G0084 Selaginella moellendorffii HOM05D006062 ORTHO05D007613 2.0e-21 105.5 51 96.1
Pp3c10_15730 Physcomitrium patens HOM05D006062 ORTHO05D007613 2.6e-21 105.1 55 89.1
arahy.Tifrunner.gnm1.ann1.GZNV26 Arachis hypogaea HOM05D006062 ORTHO05D007613 4.4e-21 104.4 61 85.2
Ah.13g071240 Amaranthus hybridus HOM05D006062 ORTHO05D007613 5.7e-21 104.0 55 87.3
BolC9t58838H Brassica oleracea HOM05D006062 ORTHO05D007613 9.7e-21 103.2 53 94.3
arahy.Tifrunner.gnm1.ann1.GUDI7G Arachis hypogaea HOM05D006062 ORTHO05D007613 4.8e-20 100.9 48 97.9
Duzib187G0879 Durio zibethinus HOM05D006062 ORTHO05D007613 1.4e-19 99.4 55 80.0
MD01G1233200 Malus domestica HOM05D006062 ORTHO05D007613 1.4e-19 99.4 61 77.0
Nitab4.5_0002302g0030 Nicotiana tabacum HOM05D006062 ORTHO05D007613 1.4e-19 99.4 48 93.8
TAR375G0371 Trochodendron aralioides HOM05D006062 ORTHO05D007613 2.5e-16 88.6 62 67.7
Cre12.g510400 Chlamydomonas reinhardtii HOM05D006062 ORTHO05D007613 8.3e-12 73.6 48 66.7
PRCOL_00001509 Prasinoderma coloniale HOM05D006062 ORTHO05D007613 3.1e-11 71.6 52 59.6
CDE02G3588 Ceratophyllum demersum HOM05D006062 ORTHO05D007613 2.7e-10 68.6 57 59.6


User provided reference genes

Program Settings