Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 7.1e-298 1026.5 537 100.0
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 5.0e-126 455.7 358 64.2
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 7.2e-125 451.8 373 62.7
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 4.0e-123 446.0 396 59.1
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 2.6e-122 443.4 359 64.1
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 3.7e-121 439.5 355 63.7
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 1.7e-118 430.6 374 61.0
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 1.2e-116 424.5 369 60.2
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 7.5e-114 415.2 352 60.8
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 1.3e-113 414.5 358 60.1
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 3.7e-113 412.9 376 57.2
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 6.3e-113 412.1 368 57.9
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 1.4e-112 411.0 388 57.5
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.8e-112 410.6 354 59.9
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 7.0e-112 408.7 387 55.3
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 1.2e-111 407.9 370 58.1
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 1.3e-110 404.4 368 57.9
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 1.7e-110 404.1 369 58.3
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 3.8e-110 402.9 354 59.6
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 8.6e-110 401.7 354 57.1
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 1.1e-109 401.4 359 57.7
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 1.9e-109 400.6 376 57.4
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 1.2e-108 397.9 353 58.9
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 2.8e-108 396.7 371 56.9
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 1.4e-107 394.4 365 57.0
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 1.8e-107 394.0 389 55.5
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 1.8e-107 394.0 357 58.5
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 2.3e-107 393.7 368 57.6
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 6.8e-107 392.1 367 56.9
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 9.8e-106 388.3 359 56.5
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 1.7e-105 387.5 364 56.3
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 2.2e-105 387.1 374 55.9
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 6.4e-105 385.6 365 56.7
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 1.1e-104 384.8 368 56.0
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 3.5e-103 379.8 297 64.6
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 3.5e-103 379.8 360 56.4
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 7.8e-103 378.6 358 57.8
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 7.8e-103 378.6 389 53.0
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 1.0e-102 378.3 360 55.3
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 1.3e-102 377.9 433 49.0
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 1.7e-102 377.5 365 55.6
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 1.7e-102 377.5 386 52.8
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 2.3e-102 377.1 393 51.9
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 1.5e-101 374.4 360 55.0
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 1.5e-101 374.4 358 53.6
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 2.5e-101 373.6 364 56.3
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 3.3e-101 373.2 368 55.2
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 4.3e-101 372.9 394 51.0
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 2.1e-100 370.5 367 54.0
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 3.6e-100 369.8 366 53.8
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 6.2e-100 369.0 404 50.7
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 1.0e-99 368.2 352 54.5
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 8.9e-99 365.2 403 51.4
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 1.2e-98 364.8 351 54.4
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 1.2e-98 364.8 354 55.9
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 3.7e-97 359.8 410 49.5
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 1.0e-94 351.7 376 50.0
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 1.3e-94 351.3 394 50.3
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 1.2e-90 338.2 377 50.9
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 3.4e-90 336.7 295 57.6
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 9.8e-90 335.1 310 58.7
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 1.7e-89 334.3 432 44.9
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 2.2e-89 334.0 308 56.8
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 3.7e-89 333.2 292 58.2
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 3.2e-88 330.1 284 57.7
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 7.1e-88 328.9 360 51.7
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 2.1e-87 327.4 265 62.6
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 6.0e-87 325.9 359 49.9
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 2.3e-86 323.9 365 50.1
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 3.9e-86 323.2 378 48.9
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 3.9e-86 323.2 357 50.1
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 1.9e-85 320.9 275 62.9
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 1.3e-81 308.1 355 48.2
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 7.1e-80 302.4 297 54.5
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 9.2e-80 302.0 372 48.4
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.6e-77 292.7 309 52.8
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 1.2e-76 291.6 420 42.9
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 4.7e-76 289.7 359 47.1
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 8.9e-75 285.4 284 53.2
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 8.9e-75 285.4 388 43.6
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 9.9e-74 282.0 270 54.4
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 2.2e-73 280.8 275 54.5
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 8.4e-73 278.9 300 51.3
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.4e-72 278.1 333 48.9
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 1.9e-72 277.7 301 51.8
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.0e-70 271.9 276 53.3
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 2.3e-70 270.8 295 50.8
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 2.5e-69 267.3 287 53.0
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 3.6e-68 263.5 275 53.5
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 2.4e-67 260.8 258 53.1
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 9.3e-64 248.8 322 44.4
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 2.1e-63 247.7 274 51.8
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 1.1e-61 241.9 266 51.5
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 6.2e-60 236.1 380 38.9
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 5.3e-59 233.0 255 52.2
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 3.4e-58 230.3 393 38.7
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 4.2e-56 223.4 303 43.9
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 3.5e-55 220.3 238 50.4
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 4.6e-55 219.9 368 39.9
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 6.7e-54 216.1 146 71.2
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 1.5e-53 214.9 525 32.0
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 3.7e-52 210.3 287 45.6
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 8.1e-52 209.1 268 41.0
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 2.2e-49 201.1 182 56.0
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 4.6e-47 193.4 366 37.7
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 5.7e-45 186.4 194 51.5
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 1.1e-43 182.2 269 42.4
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.2e-39 168.7 231 43.3
CARHR202980 Cardamine hirsuta HOM05D006096 ORTHO05D007775 1.8e-38 164.9 219 45.7
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 1.7e-33 148.3 342 31.9
QL06p048511 Quercus lobata HOM05D006096 ORTHO05D007775 2.5e-32 144.4 99 68.7
GSVIVG01006632001 Vitis vinifera HOM05D006096 ORTHO05D007775 5.5e-32 143.3 101 68.3
Cre17.g719050 Chlamydomonas reinhardtii HOM05D006096 ORTHO05D007775 1.7e-28 131.7 301 32.9
Gohir.D10G103800 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.1e-24 119.0 79 68.4
Carub.0006s0878 Capsella rubella HOM05D006096 ORTHO05D007775 1.4e-24 118.6 85 64.7
BcaB02g08416 Brassica carinata HOM05D006096 ORTHO05D007775 1.5e-21 108.6 88 62.5
SEGI_01830 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 3.1e-19 100.9 115 45.2
HanXRQChr02g0032001 Helianthus annuus HOM05D006096 ORTHO05D007775 7.0e-19 99.8 69 69.6
Cc03_g11790 Coffea canephora HOM05D006096 ORTHO05D007775 6.5e-17 93.2 87 55.2
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 1.8e-14 85.1 221 33.5
Ah.02g123840 Amaranthus hybridus HOM05D006096 ORTHO05D007775 6.3e-12 76.6 67 55.2
SEGI_02986 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 8.2e-12 76.3 63 52.4
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 5.3e-11 73.6 51 66.7
Oeu050939.1 Olea europaea HOM05D019514 ORTHO05D004650 8.5e-09 66.2 129 34.9
CsaV3_UNG160180 Cucumis sativus L. HOM05D006096 ORTHO05D007775 4.7e-07 60.5 87 40.2
RcHm_v2.0_Chr4g0406191 Rosa chinensis HOM05D006096 ORTHO05D007775 1.0e-06 59.3 60 55.0


User provided reference genes

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