Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 1.6e-52 209.1 105 100.0
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 3.7e-41 171.4 110 81.8
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 6.3e-25 117.5 112 58.9
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 8.2e-25 117.1 71 83.1
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.1e-24 116.7 93 66.7
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.4e-24 115.5 97 63.9
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 3.1e-24 115.2 72 80.6
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 3.1e-24 115.2 72 80.6
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 4.1e-24 114.8 71 81.7
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 7.0e-24 114.0 76 76.3
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 2.7e-23 112.1 90 65.6
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 2.7e-23 112.1 72 77.8
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 2.7e-23 112.1 71 78.9
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 5.9e-23 110.9 74 78.4
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 7.7e-23 110.5 114 54.4
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 1.7e-22 109.4 72 76.4
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.7e-22 109.4 72 76.4
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.7e-22 109.4 72 76.4
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 2.9e-22 108.6 65 81.5
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 2.9e-22 108.6 72 76.4
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 2.9e-22 108.6 75 73.3
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 2.9e-22 108.6 72 76.4
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 3.8e-22 108.2 75 76.0
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.8e-22 108.2 72 76.4
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 3.8e-22 108.2 72 75.0
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 3.8e-22 108.2 103 59.2
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 5.0e-22 107.8 68 77.9
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 6.5e-22 107.5 72 75.0
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 8.5e-22 107.1 66 81.8
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 1.9e-21 105.9 96 58.3
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 1.9e-21 105.9 78 70.5
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 2.5e-21 105.5 104 56.7
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 3.2e-21 105.1 86 64.0
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 3.2e-21 105.1 78 71.8
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 3.2e-21 105.1 64 78.1
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 5.5e-21 104.4 67 74.6
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 5.5e-21 104.4 62 83.9
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 7.2e-21 104.0 67 74.6
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 7.2e-21 104.0 67 77.6
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 9.4e-21 103.6 94 59.6
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 9.4e-21 103.6 72 73.6
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.6e-20 102.8 69 72.5
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 1.6e-20 102.8 100 56.0
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 3.6e-20 101.7 75 65.3
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 3.6e-20 101.7 69 68.1
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 4.7e-20 101.3 78 69.2
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 4.7e-20 101.3 68 70.6
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 4.7e-20 101.3 75 66.7
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 4.7e-20 101.3 70 72.9
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 4.7e-20 101.3 100 55.0
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 4.7e-20 101.3 100 55.0
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 4.7e-20 101.3 69 69.6
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 6.1e-20 100.9 66 75.8
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 6.1e-20 100.9 68 70.6
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 6.1e-20 100.9 68 70.6
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 6.1e-20 100.9 68 70.6
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 6.1e-20 100.9 99 55.6
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 6.1e-20 100.9 84 63.1
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 8.0e-20 100.5 64 76.6
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 8.0e-20 100.5 64 75.0
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 8.0e-20 100.5 64 75.0
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 8.0e-20 100.5 104 52.9
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 8.0e-20 100.5 75 65.3
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 1.0e-19 100.1 64 76.6
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 1.0e-19 100.1 95 55.8
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.0e-19 100.1 64 75.0
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.0e-19 100.1 64 75.0
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 1.4e-19 99.8 76 68.4
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 1.8e-19 99.4 62 77.4
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 1.8e-19 99.4 63 76.2
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 3.0e-19 98.6 63 76.2
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 4.0e-19 98.2 81 61.7
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 5.2e-19 97.8 75 65.3
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 5.2e-19 97.8 69 78.3
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 5.2e-19 97.8 63 74.6
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 6.8e-19 97.4 67 73.1
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 8.8e-19 97.1 75 65.3
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 1.5e-18 96.3 100 52.0
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 1.5e-18 96.3 72 69.4
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.5e-18 96.3 100 51.0
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 1.5e-18 96.3 87 57.5
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.5e-18 96.3 66 68.2
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 2.0e-18 95.9 64 71.9
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 2.0e-18 95.9 63 73.0
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 2.0e-18 95.9 77 59.7
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 3.4e-18 95.1 63 73.0
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 7.5e-18 94.0 64 70.3
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 7.5e-18 94.0 70 62.9
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 9.8e-18 93.6 77 58.4
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 9.8e-18 93.6 73 60.3
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.3e-17 93.2 65 70.8
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 1.7e-17 92.8 68 67.6
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 1.7e-17 92.8 66 69.7
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 2.2e-17 92.4 69 60.9
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.8e-17 92.0 67 67.2
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.8e-17 92.0 67 67.2
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 4.8e-17 91.3 66 69.7
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 8.3e-17 90.5 81 56.8
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 1.1e-16 90.1 77 61.0
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.7e-15 85.5 62 69.4
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 3.5e-15 85.1 56 80.4
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 5.9e-15 84.3 67 65.7
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.0e-14 83.6 63 61.9
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 3.8e-14 81.6 81 55.6
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 3.2e-13 78.6 61 65.6
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 1.0e-11 73.6 67 56.7
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 5.2e-11 71.2 60 66.7
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.7e-07 58.9 42 66.7
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.7e-07 58.9 42 66.7


User provided reference genes

Program Settings