Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033010.1 Olea europaea HOM05D004316 ORTHO05D005149 9.8e-270 932.9 495 100.0
Oeu023579.1 Olea europaea HOM05D004316 ORTHO05D005149 5.7e-217 757.7 495 82.0
MSTRG.19858 Avicennia marina HOM05D004316 ORTHO05D005149 7.3e-148 528.1 500 60.8
CSS0028183 Camellia sinensis var. sinensis HOM05D004316 ORTHO05D005149 8.1e-147 524.6 519 59.9
MSTRG.6426 Avicennia marina HOM05D004316 ORTHO05D005149 3.4e-137 492.7 504 59.1
Migut.J01754 Erythranthe guttata HOM05D004316 ORTHO05D005149 9.3e-135 484.6 391 67.5
Dinv12489 Davidia involucrata HOM05D004316 ORTHO05D005149 6.2e-131 471.9 482 56.8
SalBow6G3548 Salvia bowleyana HOM05D004316 ORTHO05D005149 3.1e-130 469.5 488 57.0
Cc06_g17600 Coffea canephora HOM05D004316 ORTHO05D005149 3.4e-129 466.1 468 59.0
Lju124C42T7 Lonicera japonica HOM05D004316 ORTHO05D005149 5.1e-125 452.2 513 53.0
Peaxi162Scf00130g00012 Petunia axillaris HOM05D004316 ORTHO05D005149 2.5e-124 449.9 483 56.3
DCAR_013604 Daucus carota HOM05D004316 ORTHO05D005149 2.8e-123 446.4 492 52.8
QL07p000671 Quercus lobata HOM05D004316 ORTHO05D005149 7.6e-121 438.3 515 54.4
Potri.006G050100 Populus trichocarpa HOM05D004316 ORTHO05D005149 4.2e-119 432.6 531 51.0
Sabra16G0058800 Salix brachista HOM05D004316 ORTHO05D005149 9.6e-116 421.4 536 50.7
CiPaw.09G038700 Carya illinoinensis HOM05D004316 ORTHO05D005149 1.3e-115 421.0 533 48.2
Dinv39612 Davidia involucrata HOM05D004316 ORTHO05D005149 2.1e-115 420.2 383 60.3
Duzib152G0001 Durio zibethinus HOM05D004316 ORTHO05D005149 6.2e-115 418.7 507 52.1
Thecc.05G152800 Theobroma cacao HOM05D004316 ORTHO05D005149 2.4e-114 416.8 507 50.1
Lsat_1_v5_gn_9_29201 Lactuca sativa HOM05D004316 ORTHO05D005149 3.1e-114 416.4 496 50.8
Duzib128G1660 Durio zibethinus HOM05D004316 ORTHO05D005149 5.3e-114 415.6 517 49.9
Cfa016810 Carpinus fangiana HOM05D004316 ORTHO05D005149 6.9e-114 415.2 529 49.5
Duzib093G1448 Durio zibethinus HOM05D004316 ORTHO05D005149 9.0e-114 414.8 527 50.3
TWI74G1076 Tripterygium wilfordii HOM05D004316 ORTHO05D005149 2.6e-113 413.3 506 50.4
Potri.016G056300 Populus trichocarpa HOM05D004316 ORTHO05D005149 1.3e-112 411.0 532 50.9
Nn2g15213 Nelumbo nucifera HOM05D004316 ORTHO05D005149 3.8e-112 409.5 540 48.7
COL.COLO4_28298 Corchorus olitorius HOM05D004316 ORTHO05D005149 1.4e-111 407.5 497 50.5
PGR004G2076 Punica granatum HOM05D004316 ORTHO05D005149 5.5e-111 405.6 514 48.2
Haze_19850 Corylus avellana HOM05D004316 ORTHO05D005149 1.6e-110 404.1 538 48.9
Ciclev10004677m.g Citrus clementina HOM05D004316 ORTHO05D005149 6.0e-110 402.1 562 47.2
TAR623G0492 Trochodendron aralioides HOM05D004316 ORTHO05D005149 2.3e-109 400.2 509 48.1
Nitab4.5_0013624g0010 Nicotiana tabacum HOM05D004316 ORTHO05D005149 1.1e-108 397.9 365 60.8
CiPaw.10G033700 Carya illinoinensis HOM05D004316 ORTHO05D005149 1.9e-108 397.1 522 47.9
Duzib106G1406 Durio zibethinus HOM05D004316 ORTHO05D005149 2.5e-108 396.7 527 48.4
Manes.09G020900 Manihot esculenta HOM05D004316 ORTHO05D005149 2.5e-108 396.7 539 47.7
Gohir.A01G131000 Gossypium hirsutum HOM05D004316 ORTHO05D005149 5.7e-108 395.6 522 48.9
Nitab4.5_0000586g0080 Nicotiana tabacum HOM05D004316 ORTHO05D005149 6.3e-107 392.1 362 59.9
TAR633G0189 Trochodendron aralioides HOM05D004316 ORTHO05D005149 2.4e-106 390.2 460 51.3
Lsat_1_v5_gn_8_81220 Lactuca sativa HOM05D004316 ORTHO05D005149 4.1e-106 389.4 506 47.8
Gorai.002G147000 Gossypium raimondii HOM05D004316 ORTHO05D005149 5.3e-106 389.0 519 48.7
ClCG04G000170 Citrullus lanatus HOM05D004316 ORTHO05D005149 2.0e-105 387.1 523 47.2
Atru.chr1.1110 Acer truncatum HOM05D004316 ORTHO05D005149 2.6e-105 386.7 511 47.6
Sabra06G0035000 Salix brachista HOM05D004316 ORTHO05D005149 4.5e-105 386.0 365 58.9
Glyma.02G184700 Glycine max HOM05D004316 ORTHO05D005149 7.6e-105 385.2 487 50.9
Gohir.D01G120400 Gossypium hirsutum HOM05D004316 ORTHO05D005149 1.0e-104 384.8 519 48.7
CsaV3_4G011650 Cucumis sativus L. HOM05D004316 ORTHO05D005149 1.7e-104 384.0 521 47.4
Nn7g36300 Nelumbo nucifera HOM05D004316 ORTHO05D005149 1.7e-104 384.0 534 46.3
HanXRQChr10g0296681 Helianthus annuus HOM05D004316 ORTHO05D005149 5.0e-104 382.5 496 47.8
Lsat_1_v5_gn_5_161320 Lactuca sativa HOM05D004316 ORTHO05D005149 6.5e-104 382.1 495 47.7
MELO3C023147.2 Cucumis melo HOM05D004316 ORTHO05D005149 1.6e-102 377.5 512 46.3
Rhsim03G0025000 Rhododendron simsii HOM05D004316 ORTHO05D005149 2.7e-102 376.7 349 59.3
PGSC0003DMG400027281 Solanum tuberosum HOM05D004316 ORTHO05D005149 2.7e-102 376.7 451 51.2
SGA_v2.0_scaffold105G30405 Striga asiatica HOM05D004316 ORTHO05D005149 7.9e-102 375.2 365 55.9
CANSAT80G0327 Cannabis sativa HOM05D004316 ORTHO05D005149 5.1e-101 372.5 531 46.9
Gorai.007G360600 Gossypium raimondii HOM05D004316 ORTHO05D005149 5.1e-101 372.5 498 47.4
Prupe.7G058900 Prunus persica HOM05D004316 ORTHO05D005149 6.7e-101 372.1 525 46.1
unitig_22.g6044 Utricularia gibba HOM05D004316 ORTHO05D005149 8.8e-101 371.7 500 46.4
Gohir.D11G329400 Gossypium hirsutum HOM05D004316 ORTHO05D005149 1.1e-100 371.3 499 47.9
Gohir.A11G312700 Gossypium hirsutum HOM05D004316 ORTHO05D005149 1.9e-100 370.5 486 47.7
Sopen04g007890 Solanum pennellii HOM05D004316 ORTHO05D005149 2.5e-100 370.2 476 48.3
Sed0026358 Sechium edule HOM05D004316 ORTHO05D005149 7.4e-100 368.6 521 45.1
SGA_v2.0_scaffold66G22353 Striga asiatica HOM05D004316 ORTHO05D005149 9.7e-100 368.2 364 56.0
Aa31LG10G12240 Aethionema arabicum HOM05D004316 ORTHO05D005149 1.3e-99 367.9 492 46.7
RcHm_v2.0_Chr3g0482601 Rosa chinensis HOM05D004316 ORTHO05D005149 2.2e-99 367.1 545 46.2
MD12G1074600 Malus domestica HOM05D004316 ORTHO05D005149 8.2e-99 365.2 528 45.6
THA.LOC104802092 Tarenaya hassleriana HOM05D004316 ORTHO05D005149 1.8e-98 364.0 498 45.6
arahy.Tifrunner.gnm1.ann1.WY7AF9 Arachis hypogaea HOM05D004316 ORTHO05D005149 5.3e-98 362.5 508 45.9
Thhalv10006507m.g Eutrema salsugineum HOM05D004316 ORTHO05D005149 8.5e-96 355.1 492 44.9
arahy.Tifrunner.gnm1.ann1.7DG8CI Arachis hypogaea HOM05D004316 ORTHO05D005149 2.5e-95 353.6 503 45.5
Lalb_Chr20g0110531 Lupinus albus HOM05D004316 ORTHO05D005149 2.5e-95 353.6 507 46.4
FAN05G0825 Fragaria x ananassa HOM05D004316 ORTHO05D005149 5.5e-95 352.4 550 44.0
VMungo0720G0980 Vigna mungo HOM05D004316 ORTHO05D005149 7.2e-95 352.1 481 46.6
FAN02G3785 Fragaria x ananassa HOM05D004316 ORTHO05D005149 9.4e-95 351.7 539 44.5
Nitab4.5_0000082g0160 Nicotiana tabacum HOM05D004316 ORTHO05D005149 1.2e-94 351.3 358 57.0
Cpa.g.sc33.204 Carica papaya HOM05D004316 ORTHO05D005149 1.6e-94 350.9 438 50.5
Lalb_Chr01g0017331 Lupinus albus HOM05D004316 ORTHO05D005149 3.6e-94 349.7 491 45.4
Lj1g0001621 Lotus japonicus HOM05D004316 ORTHO05D005149 6.1e-94 349.0 486 46.5
TWI53G1538 Tripterygium wilfordii HOM05D004316 ORTHO05D005149 1.0e-93 348.2 357 55.2
Manes.08G051300 Manihot esculenta HOM05D004316 ORTHO05D005149 5.7e-92 342.4 512 45.1
THA.LOC104824440 Tarenaya hassleriana HOM05D004316 ORTHO05D005149 5.7e-92 342.4 498 44.0
AT3G57400 Arabidopsis thaliana HOM05D004316 ORTHO05D005149 7.4e-92 342.0 453 47.2
MD14G1072700 Malus domestica HOM05D004316 ORTHO05D005149 1.4e-90 337.8 451 48.6
BcaB02g07608 Brassica carinata HOM05D004316 ORTHO05D005149 2.4e-90 337.0 489 44.8
PGSC0003DMG400008166 Solanum tuberosum HOM05D004316 ORTHO05D005149 2.4e-90 337.0 471 45.2
AL5G38930 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 3.1e-90 336.7 508 44.9
CAN.G676.33 Capsicum annuum HOM05D004316 ORTHO05D005149 5.3e-90 335.9 430 49.3
FAN09G3682 Fragaria x ananassa HOM05D004316 ORTHO05D005149 5.3e-90 335.9 495 46.1
vmacro07846 Vaccinium macrocarpon HOM05D004316 ORTHO05D005149 5.3e-90 335.9 515 44.1
CARHR167600 Cardamine hirsuta HOM05D004316 ORTHO05D005149 2.6e-89 333.6 498 43.6
Lalb_Chr25g0287141 Lupinus albus HOM05D004316 ORTHO05D005149 4.5e-89 332.8 496 43.8
Sp5g05200 Schrenkiella parvula HOM05D004316 ORTHO05D005149 4.5e-89 332.8 501 42.7
Glyma.03G136300 Glycine max HOM05D004316 ORTHO05D005149 1.3e-88 331.3 437 48.1
FvH4_6g23940 Fragaria vesca HOM05D004316 ORTHO05D005149 2.2e-88 330.5 496 45.4
PSO384G0452 Papaver somniferum HOM05D004316 ORTHO05D005149 1.1e-87 328.2 534 42.1
FAN14G3684 Fragaria x ananassa HOM05D004316 ORTHO05D005149 1.4e-87 327.8 501 45.1
SGA_v2.0_scaffold5252G54614 Striga asiatica HOM05D004316 ORTHO05D005149 7.2e-87 325.5 306 56.9
PSO339G4967 Papaver somniferum HOM05D004316 ORTHO05D005149 6.1e-86 322.4 534 41.8
Eucgr.A02343 Eucalyptus grandis HOM05D004316 ORTHO05D005149 1.5e-84 317.8 479 44.5
Glyma.19G138200 Glycine max HOM05D004316 ORTHO05D005149 2.2e-83 313.9 487 43.3
HanXRQChr13g0395921 Helianthus annuus HOM05D004316 ORTHO05D005149 2.2e-83 313.9 498 42.4
BolC8t50893H Brassica oleracea HOM05D004316 ORTHO05D005149 4.8e-83 312.8 495 43.2
Aqoxy1G00235 Aquilegia oxysepala HOM05D004316 ORTHO05D005149 4.1e-82 309.7 431 46.6
BcaC08g44838 Brassica carinata HOM05D004316 ORTHO05D005149 5.9e-81 305.8 437 46.5
C06p24450 Brassica napus HOM05D004316 ORTHO05D005149 5.9e-81 305.8 437 46.5
BolC6t37592H Brassica oleracea HOM05D004316 ORTHO05D005149 5.9e-81 305.8 437 46.5
A07p23380 Brassica napus HOM05D004316 ORTHO05D005149 7.7e-81 305.4 366 48.9
BcaC02g09937 Brassica carinata HOM05D004316 ORTHO05D005149 1.0e-80 305.1 503 41.7
C04p35000 Brassica napus HOM05D004316 ORTHO05D005149 1.0e-80 305.1 503 41.7
BolC4t25057H Brassica oleracea HOM05D004316 ORTHO05D005149 1.0e-80 305.1 503 41.7
EL10Ac3g07095 Beta vulgaris HOM05D004316 ORTHO05D005149 2.2e-80 303.9 533 40.5
Ah.13g076490 Amaranthus hybridus HOM05D004316 ORTHO05D005149 8.5e-80 302.0 450 44.9
C08p32820 Brassica napus HOM05D004316 ORTHO05D005149 2.5e-79 300.4 495 41.4
BraA07t30003Z Brassica rapa HOM05D004316 ORTHO05D005149 9.4e-79 298.5 364 48.1
ECA248G0930 Erigeron canadensis HOM05D004316 ORTHO05D005149 1.2e-78 298.1 407 44.0
Solyc10g079390.1 Solanum lycopersicum HOM05D004316 ORTHO05D005149 8.0e-78 295.4 422 44.8
Carub.0005s2424 Capsella rubella HOM05D004316 ORTHO05D005149 1.0e-77 295.0 460 43.7
A09p50290 Brassica napus HOM05D004316 ORTHO05D005149 8.8e-77 292.0 495 41.2
BraA09t40480Z Brassica rapa HOM05D004316 ORTHO05D005149 8.8e-77 292.0 495 41.2
A04p03150 Brassica napus HOM05D004316 ORTHO05D005149 2.8e-75 287.0 378 44.2
BcaB02g08317 Brassica carinata HOM05D004316 ORTHO05D005149 4.8e-75 286.2 392 44.6
AUR62026044 Chenopodium quinoa HOM05D004316 ORTHO05D005149 1.8e-74 284.3 387 46.0
Medtr7g091450 Medicago truncatula HOM05D004316 ORTHO05D005149 1.8e-74 284.3 363 47.1
HanXRQChr05g0131861 Helianthus annuus HOM05D004316 ORTHO05D005149 3.1e-74 283.5 497 40.6
BcaC07g40393 Brassica carinata HOM05D004316 ORTHO05D005149 4.1e-74 283.1 497 40.4
Psat3g072520 Pisum sativum HOM05D004316 ORTHO05D005149 2.0e-73 280.8 347 48.1
Sc19g0006560 Simmondsia chinensis HOM05D004316 ORTHO05D005149 2.0e-73 280.8 528 37.3
ECA247G0299 Erigeron canadensis HOM05D004316 ORTHO05D005149 7.7e-73 278.9 317 50.5
Ca_08453_v3 Cicer arietinum L. HOM05D004316 ORTHO05D005149 1.2e-70 271.6 316 51.6
VMungo1383G1866 Vigna mungo HOM05D004316 ORTHO05D005149 1.2e-70 271.6 366 45.1
unitig_8.g3507 Utricularia gibba HOM05D004316 ORTHO05D005149 1.6e-70 271.2 297 50.5
AUR62024455 Chenopodium quinoa HOM05D004316 ORTHO05D005149 1.0e-69 268.5 388 43.3
Actinidia39222 Actinidia chinensis HOM05D004316 ORTHO05D005149 1.2e-68 265.0 235 61.3
AT5G52500 Arabidopsis thaliana HOM05D004316 ORTHO05D005149 1.3e-67 261.5 432 41.0
Phvul.001G131600 Phaseolus vulgaris HOM05D004316 ORTHO05D005149 8.3e-67 258.8 338 46.7
Solyc04g015850.3 Solanum lycopersicum HOM05D004316 ORTHO05D005149 5.5e-63 246.1 287 50.9
TPR.G3718 Trifolium pratense HOM05D004316 ORTHO05D005149 5.2e-61 239.6 334 45.2
CDE09G0122 Ceratophyllum demersum HOM05D004316 ORTHO05D005149 3.8e-56 223.4 418 36.1
CDE08G1472 Ceratophyllum demersum HOM05D004316 ORTHO05D005149 5.0e-56 223.0 429 36.8
SEGI_13236 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 3.3e-47 193.7 534 29.8
SEGI_35991 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 3.3e-47 193.7 534 29.8
ATR0782G190 Amborella trichopoda HOM05D004316 ORTHO05D005149 3.7e-43 180.3 505 31.5
AL8G26960 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 1.7e-35 154.8 180 48.9
AL205U10010 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 2.2e-35 154.5 180 49.4
Pp3c8_14130 Physcomitrium patens HOM05D004316 ORTHO05D005149 3.2e-34 150.6 431 27.6
Pp3c3_2450 Physcomitrium patens HOM05D004316 ORTHO05D005149 5.4e-34 149.8 227 40.5
Pp3c13_6400 Physcomitrium patens HOM05D004316 ORTHO05D005149 2.7e-33 147.5 288 37.2
Pp3c20_13470 Physcomitrium patens HOM05D004316 ORTHO05D005149 1.7e-32 144.8 495 27.1
Pp3c23_16170 Physcomitrium patens HOM05D004316 ORTHO05D005149 1.5e-31 141.7 415 28.0
Mapoly0052s0060 Marchantia polymorpha HOM05D004316 ORTHO05D005149 4.0e-29 133.7 313 31.3
SMO201G0108 Selaginella moellendorffii HOM05D004316 ORTHO05D005149 5.2e-29 133.3 570 24.6
Pp3c5_24720 Physcomitrium patens HOM05D004316 ORTHO05D005149 1.5e-28 131.7 559 26.1
GSVIVG01033262001 Vitis vinifera HOM05D004316 ORTHO05D005149 7.6e-28 129.4 126 49.2
Actinidia39221 Actinidia chinensis HOM05D004316 ORTHO05D005149 9.9e-28 129.0 180 47.8
Mapoly0109s0039 Marchantia polymorpha HOM05D004316 ORTHO05D005149 9.9e-28 129.0 294 31.6
AagrBONN_evm.TU.Sc2ySwM_362.2535 Anthoceros agrestis HOM05D004316 ORTHO05D005149 4.6e-25 120.2 591 24.2
Pp3c6_3920 Physcomitrium patens HOM05D004316 ORTHO05D005149 2.4e-21 107.8 227 32.2
SEGI_09580 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 1.9e-15 88.2 123 40.7
EL10Ac6g14633 Beta vulgaris HOM05D004316 ORTHO05D005149 4.0e-13 80.5 169 38.5
SEGI_40609 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 9.0e-13 79.3 86 47.7
Nn1g05572 Nelumbo nucifera HOM05D004316 ORTHO05D022954 7.6e-12 76.3 87 48.3
BcaC02g09938 Brassica carinata HOM05D004316 ORTHO05D005149 7.1e-10 69.7 44 72.7
Solyc10g017860.1 Solanum lycopersicum HOM05D004316 ORTHO05D005149 6.7e-08 63.2 55 54.5


User provided reference genes

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