Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 4.8e-181 637.9 360 100.0
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 1.4e-26 124.8 207 49.3
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 6.7e-26 122.5 229 45.4
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 6.7e-26 122.5 218 48.2
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 2.6e-25 120.6 203 45.8
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 5.5e-20 102.8 205 45.4
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 1.4e-18 98.2 203 42.9
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 1.4e-18 98.2 205 42.0
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 1.1e-17 95.1 210 41.9
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 5.7e-17 92.8 227 38.3
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 4.8e-16 89.7 236 37.7
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 1.4e-15 88.2 224 41.1
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 1.8e-15 87.8 210 40.5
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 5.3e-15 86.3 154 46.8
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 1.2e-14 85.1 215 39.1
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 2.0e-14 84.3 133 44.4
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 2.0e-14 84.3 133 44.4
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 4.5e-14 83.2 200 43.5
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 1.3e-13 81.6 122 50.0
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 8.5e-13 79.0 165 38.8
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 8.5e-13 79.0 128 48.4
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 1.5e-12 78.2 221 38.9
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 1.5e-12 78.2 182 40.1
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 2.5e-12 77.4 127 48.8
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 2.5e-12 77.4 132 43.2
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 2.5e-12 77.4 158 44.9
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 4.2e-12 76.6 224 37.1
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 7.2e-12 75.9 230 36.1
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 7.2e-12 75.9 199 41.7
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 9.4e-12 75.5 139 43.9
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 1.2e-11 75.1 201 43.8
Ca_26016_v3 Cicer arietinum L. HOM05D007490 ORTHO05D008750 1.6e-11 74.7 151 39.7
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 2.7e-11 73.9 207 37.7
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 3.6e-11 73.6 91 54.9
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 4.7e-11 73.2 151 42.4
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 6.1e-11 72.8 415 29.2
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 1.4e-10 71.6 130 46.2
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 1.8e-10 71.2 174 42.5
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.8e-10 71.2 186 39.8
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 3.0e-10 70.5 231 35.1
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 3.0e-10 70.5 221 35.7
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 6.8e-10 69.3 80 60.0
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 8.8e-10 68.9 246 32.5
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 1.2e-09 68.6 171 37.4
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 2.0e-09 67.8 214 36.0
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 2.6e-09 67.4 192 35.9
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 4.4e-09 66.6 221 33.9
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 5.7e-09 66.2 129 45.0
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 5.7e-09 66.2 259 34.0
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 9.8e-09 65.5 230 34.8
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 2.2e-08 64.3 223 35.0
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 2.2e-08 64.3 222 34.2
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 2.8e-08 63.9 143 37.1
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 3.7e-08 63.5 226 34.1
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 3.7e-08 63.5 162 38.3
Lalb_Chr21g0316471 Lupinus albus HOM05D007490 ORTHO05D008750 3.7e-08 63.5 85 49.4
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 4.8e-08 63.2 197 35.0
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 8.3e-08 62.4 143 39.9
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 1.4e-07 61.6 232 34.1
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 3.1e-07 60.5 260 32.3
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 4.1e-07 60.1 230 34.3
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 4.1e-07 60.1 221 33.9
Nitab4.5_0001509g0010 Nicotiana tabacum HOM05D015445 ORTHO05D025892 9.1e-07 58.9 213 34.3
ATR0626G408 Amborella trichopoda HOM05D007490 ORTHO05D008750 1.6e-06 58.2 133 36.1
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 1.6e-06 58.2 212 32.5
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 1.6e-06 58.2 131 38.9
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 2.0e-06 57.8 198 33.8
Nitab4.5_0004587g0040 Nicotiana tabacum HOM05D015445 ORTHO05D025892 3.5e-06 57.0 204 34.8
Peaxi162Scf00354g00210 Petunia axillaris HOM05D015445 ORTHO05D008750 3.5e-06 57.0 219 35.2
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 4.5e-06 56.6 212 31.1
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 5.9e-06 56.2 46 65.2
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 7.7e-06 55.8 188 35.6


User provided reference genes

Program Settings