Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032962.1 Olea europaea HOM05D005489 ORTHO05D006629 3.9e-75 284.6 136 100.0
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 1.4e-64 249.6 136 86.8
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 4.0e-64 248.1 135 87.4
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 6.8e-64 247.3 136 86.0
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 1.2e-63 246.5 136 84.6
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 2.0e-63 245.7 136 86.0
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 2.0e-63 245.7 135 83.7
BcaB03g13640 Brassica carinata HOM05D005489 ORTHO05D006629 2.6e-63 245.4 136 83.8
A05p23180 Brassica napus HOM05D005489 ORTHO05D006629 2.6e-63 245.4 136 83.8
C05p36630 Brassica napus HOM05D005489 ORTHO05D006629 2.6e-63 245.4 136 83.8
BraA05t21185Z Brassica rapa HOM05D005489 ORTHO05D006629 2.6e-63 245.4 136 83.8
COL.COLO4_32811 Corchorus olitorius HOM05D005489 ORTHO05D006629 2.6e-63 245.4 136 84.6
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 3.4e-63 245.0 136 85.3
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 3.4e-63 245.0 136 85.3
CARHR034780 Cardamine hirsuta HOM05D005489 ORTHO05D006629 4.4e-63 244.6 136 82.4
Ciclev10002818m.g Citrus clementina HOM05D005489 ORTHO05D006629 4.4e-63 244.6 136 84.6
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 4.4e-63 244.6 136 84.6
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 4.4e-63 244.6 135 85.9
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 4.4e-63 244.6 136 84.6
AL1G51120 Arabidopsis lyrata HOM05D005489 ORTHO05D006629 5.8e-63 244.2 136 83.1
AT1G36980 Arabidopsis thaliana HOM05D005489 ORTHO05D006629 5.8e-63 244.2 136 83.1
Carub.0001s3388 Capsella rubella HOM05D005489 ORTHO05D006629 5.8e-63 244.2 136 83.8
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 7.6e-63 243.8 136 83.8
Sp1g31180 Schrenkiella parvula HOM05D005489 ORTHO05D006629 7.6e-63 243.8 136 83.1
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 9.9e-63 243.4 135 85.2
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 1.3e-62 243.0 136 83.1
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 1.3e-62 243.0 136 83.8
SGA_v2.0_scaffold24G10504 Striga asiatica HOM05D005489 ORTHO05D006629 1.3e-62 243.0 136 85.3
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 1.3e-62 243.0 136 83.8
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.7e-62 242.7 136 83.1
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.7e-62 242.7 136 83.1
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.7e-62 242.7 136 83.1
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 1.7e-62 242.7 136 83.1
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 2.2e-62 242.3 136 83.1
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 2.2e-62 242.3 136 83.1
Thhalv10005115m.g Eutrema salsugineum HOM05D005489 ORTHO05D006629 2.2e-62 242.3 136 82.4
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 2.2e-62 242.3 136 83.8
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 2.2e-62 242.3 136 84.6
THA.LOC104806808 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 2.2e-62 242.3 136 83.8
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.9e-62 241.9 136 82.4
CAN.G255.20 Capsicum annuum HOM05D005489 ORTHO05D006629 3.8e-62 241.5 135 83.7
THA.LOC104813132 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 3.8e-62 241.5 136 83.1
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.9e-62 241.1 136 82.4
Peaxi162Scf01011g00023 Petunia axillaris HOM05D005489 ORTHO05D006629 4.9e-62 241.1 135 85.9
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 6.4e-62 240.7 136 83.1
SGA_v2.0_scaffold118G32436 Striga asiatica HOM05D005489 ORTHO05D006629 8.4e-62 240.4 136 83.8
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 1.1e-61 240.0 135 83.7
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.1e-61 240.0 133 84.2
Atru.chr13.1318 Acer truncatum HOM05D005489 ORTHO05D006629 1.4e-61 239.6 136 82.4
Atru.chr13.1362 Acer truncatum HOM05D005489 ORTHO05D006629 1.4e-61 239.6 136 82.4
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 1.4e-61 239.6 136 82.4
Migut.N03320 Erythranthe guttata HOM05D005489 ORTHO05D006629 1.4e-61 239.6 136 84.6
Sed0015736 Sechium edule HOM05D005489 ORTHO05D006629 1.4e-61 239.6 136 82.4
EL10Ac1g00039 Beta vulgaris HOM05D005489 ORTHO05D006629 2.4e-61 238.8 136 83.1
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 4.1e-61 238.0 136 82.4
MD15G1359200 Malus domestica HOM05D005489 ORTHO05D006629 4.1e-61 238.0 136 83.1
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 7.1e-61 237.3 136 82.4
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 7.1e-61 237.3 136 81.6
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 7.1e-61 237.3 136 80.9
SalBow1G3581 Salvia bowleyana HOM05D005489 ORTHO05D006629 9.2e-61 236.9 134 84.3
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 1.2e-60 236.5 135 82.2
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 1.6e-60 236.1 138 82.6
Sabra02G0070300 Salix brachista HOM05D005489 ORTHO05D006629 2.1e-60 235.7 136 81.6
FvH4_5g38950 Fragaria vesca HOM05D005489 ORTHO05D006629 3.5e-60 235.0 136 82.4
FAN04G1587 Fragaria x ananassa HOM05D005489 ORTHO05D006629 3.5e-60 235.0 136 82.4
FAN08G2064 Fragaria x ananassa HOM05D005489 ORTHO05D006629 3.5e-60 235.0 136 82.4
FAN18G3455 Fragaria x ananassa HOM05D005489 ORTHO05D006629 3.5e-60 235.0 136 82.4
RcHm_v2.0_Chr7g0240921 Rosa chinensis HOM05D005489 ORTHO05D006629 4.6e-60 234.6 136 80.9
Duzib093G1687 Durio zibethinus HOM05D005489 ORTHO05D006629 6.0e-60 234.2 136 81.6
Migut.C01190 Erythranthe guttata HOM05D005489 ORTHO05D006629 6.0e-60 234.2 136 79.4
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 7.8e-60 233.8 132 85.6
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 1.0e-59 233.4 136 80.1
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 3.3e-58 228.4 136 78.7
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea HOM05D005489 ORTHO05D006629 4.3e-58 228.0 136 78.7
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea HOM05D005489 ORTHO05D006629 4.3e-58 228.0 136 78.7
Ca_25761_v3 Cicer arietinum L. HOM05D005489 ORTHO05D006629 4.3e-58 228.0 136 80.1
Glyma.04G253700 Glycine max HOM05D005489 ORTHO05D006629 4.3e-58 228.0 136 80.1
Medtr3g073300 Medicago truncatula HOM05D005489 ORTHO05D006629 5.6e-58 227.6 136 79.4
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 7.3e-58 227.3 136 80.1
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 9.6e-58 226.9 135 79.3
TPR.G32948 Trifolium pratense HOM05D005489 ORTHO05D006629 1.6e-57 226.1 136 78.7
Psat5g135600 Pisum sativum HOM05D005489 ORTHO05D006629 3.6e-57 224.9 136 78.7
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 3.6e-57 224.9 136 78.7
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 6.2e-57 224.2 136 77.9
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 6.2e-57 224.2 136 77.9
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 8.1e-57 223.8 138 77.5
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 1.8e-56 222.6 131 80.2
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 1.8e-56 222.6 136 79.4
Nitab4.5_0000051g0120 Nicotiana tabacum HOM05D005489 ORTHO05D006629 1.8e-56 222.6 124 87.1
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 2.4e-56 222.2 136 77.2
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 6.9e-56 220.7 138 76.1
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 2.6e-55 218.8 124 82.3
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.7e-54 216.1 124 81.5
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 1.7e-54 216.1 124 82.3
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 2.2e-54 215.7 124 79.8
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 3.8e-54 214.9 133 75.2
Nitab4.5_0002332g0020 Nicotiana tabacum HOM05D005489 ORTHO05D006629 6.4e-54 214.2 119 86.6
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 6.4e-54 214.2 129 78.3
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 8.4e-54 213.8 133 74.4
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 1.9e-53 212.6 132 73.5
Cc10_g10440 Coffea canephora HOM05D005489 ORTHO05D006629 4.2e-53 211.5 124 84.7
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 5.4e-53 211.1 130 78.5
Gohir.D01G181900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 6.0e-52 207.6 124 79.8
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 7.8e-52 207.2 133 72.2
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 1.5e-50 203.0 133 71.4
SEGI_34511 Sequoiadendron giganteum HOM05D005489 ORTHO05D006629 3.6e-49 198.4 136 70.6
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 6.2e-49 197.6 206 52.9
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 2.4e-48 195.7 131 67.9
BolC5t32398H Brassica oleracea HOM05D005489 ORTHO05D006629 1.5e-47 193.0 120 76.7
BcaC05g27681 Brassica carinata HOM05D005489 ORTHO05D006629 4.9e-46 188.0 120 75.0
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 4.9e-46 188.0 131 67.2
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 5.4e-45 184.5 136 63.2
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 1.0e-43 180.3 134 61.9
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 2.1e-41 172.6 153 58.8
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 1.4e-40 169.9 128 63.3
Gorai.005G092000 Gossypium raimondii HOM05D005489 ORTHO05D006629 6.0e-36 154.5 92 79.3
Oeu050268.1 Olea europaea HOM05D005489 ORTHO05D006629 4.3e-34 148.3 76 90.8
Sabra05G0129400 Salix brachista HOM05D005489 ORTHO05D006629 7.4e-34 147.5 125 61.6
CANSAT25G2554 Cannabis sativa HOM05D005489 ORTHO05D006629 1.8e-32 142.9 85 75.3
Haze_00523 Corylus avellana HOM05D005489 ORTHO05D006629 3.1e-32 142.1 76 85.5
Cfa015959 Carpinus fangiana HOM05D005489 ORTHO05D006629 9.0e-32 140.6 131 58.0
ATR0121G008 Amborella trichopoda HOM05D005489 ORTHO05D006629 1.5e-31 139.8 74 83.8
BcaC05g27682 Brassica carinata HOM05D005489 ORTHO05D006629 4.5e-31 138.3 74 82.4
C05p36640 Brassica napus HOM05D005489 ORTHO05D006629 4.5e-31 138.3 74 82.4
DCAR_023128 Daucus carota HOM05D005489 ORTHO05D006629 4.5e-31 138.3 75 81.3
TAR127G0005 Trochodendron aralioides HOM05D005489 ORTHO05D006629 7.6e-31 137.5 75 82.7
ClCG03G009110 Citrullus lanatus HOM05D005489 ORTHO05D006629 1.0e-30 137.1 74 83.8
CsaV3_5G023520 Cucumis sativus L. HOM05D005489 ORTHO05D006629 1.0e-30 137.1 74 83.8
Nn2g15248 Nelumbo nucifera HOM05D005489 ORTHO05D006629 2.7e-28 129.0 92 68.5
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 1.5e-23 113.2 136 41.2
Sopen11g008620 Solanum pennellii HOM05D000147 ORTHO05D004360 1.3e-22 110.2 79 73.4
AUR62004694 Chenopodium quinoa HOM05D005489 ORTHO05D006629 3.8e-22 108.6 140 47.9
PRCOL_00003843 Prasinoderma coloniale HOM05D005489 ORTHO05D006629 8.8e-19 97.4 117 47.0
Eucgr.F04378 Eucalyptus grandis HOM05D005489 ORTHO05D006629 1.3e-17 93.6 47 87.2
SalBow7G4082 Salvia bowleyana HOM05D005489 ORTHO05D006629 1.3e-17 93.6 165 41.2
ClCG03G009140 Citrullus lanatus HOM05D005489 ORTHO05D006629 1.0e-14 84.0 50 80.0
Solyc11g013660.1 Solanum lycopersicum HOM05D005489 ORTHO05D006629 5.1e-11 71.6 44 84.1
SalBow7G1125 Salvia bowleyana HOM05D002998 ORTHO05D006629 5.7e-10 68.2 35 82.9
Os08g0469200 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 9.1e-08 60.8 58 55.2


User provided reference genes

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