Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032872.2 Olea europaea HOM05D004071 ORTHO05D004501 2.7e-197 691.8 345 100.0
Oeu025120.1 Olea europaea HOM05D004071 ORTHO05D004501 8.4e-151 537.3 343 76.7
Oeu049330.1 Olea europaea HOM05D004071 ORTHO05D004501 1.1e-147 526.9 344 76.2
Migut.K00863 Erythranthe guttata HOM05D004071 ORTHO05D004501 1.3e-146 523.5 348 75.0
Atru.chr10.1868 Acer truncatum HOM05D004071 ORTHO05D004501 2.8e-146 522.3 347 75.5
Hma1.2p1_0550F.1_g177140 Hydrangea macrophylla HOM05D004071 ORTHO05D004501 3.1e-145 518.8 346 74.9
SGA_v2.0_scaffold204G41658 Striga asiatica HOM05D004071 ORTHO05D004501 5.3e-145 518.1 347 74.4
MSTRG.23829 Avicennia marina HOM05D004071 ORTHO05D004501 6.9e-145 517.7 349 75.4
Cc07_g04980 Coffea canephora HOM05D004071 ORTHO05D004501 9.0e-145 517.3 346 74.9
MD17G1072900 Malus domestica HOM05D004071 ORTHO05D004501 1.7e-143 513.1 347 74.1
Cfa007968 Carpinus fangiana HOM05D004071 ORTHO05D004501 2.9e-143 512.3 341 74.8
CiPaw.04G003700 Carya illinoinensis HOM05D004071 ORTHO05D004501 4.9e-143 511.5 343 73.5
COL.COLO4_04619 Corchorus olitorius HOM05D004071 ORTHO05D004501 1.9e-142 509.6 347 72.6
Ciclev10012116m.g Citrus clementina HOM05D004071 ORTHO05D004501 1.2e-141 506.9 351 71.2
Thecc.04G143800 Theobroma cacao HOM05D004071 ORTHO05D004501 2.7e-141 505.8 347 72.3
Prupe.3G241500 Prunus persica HOM05D004071 ORTHO05D004501 4.6e-141 505.0 345 75.1
CAN.G153.14 Capsicum annuum HOM05D004071 ORTHO05D004501 2.3e-140 502.7 349 71.6
SalBow1G4702 Salvia bowleyana HOM05D004071 ORTHO05D004501 6.7e-140 501.1 348 72.1
Gorai.001G082400 Gossypium raimondii HOM05D004071 ORTHO05D004501 8.7e-140 500.7 343 72.9
Dinv34868 Davidia involucrata HOM05D004071 ORTHO05D004501 2.5e-139 499.2 344 74.4
SalBow1G4945 Salvia bowleyana HOM05D004071 ORTHO05D004501 5.6e-139 498.0 348 71.8
Cpa.g.sc179.42 Carica papaya HOM05D004071 ORTHO05D004501 9.6e-139 497.3 344 73.3
Gohir.D07G183200 Gossypium hirsutum HOM05D004071 ORTHO05D004501 2.1e-138 496.1 347 71.5
Migut.H00537 Erythranthe guttata HOM05D004071 ORTHO05D004501 3.7e-138 495.4 349 71.1
CSS0015718 Camellia sinensis var. sinensis HOM05D004071 ORTHO05D004501 4.8e-138 495.0 346 72.3
CiPaw.03G006000 Carya illinoinensis HOM05D004071 ORTHO05D004501 4.8e-138 495.0 341 71.8
Gohir.A07G073300 Gossypium hirsutum HOM05D004071 ORTHO05D004501 4.8e-138 495.0 343 71.4
Gohir.A07G176100 Gossypium hirsutum HOM05D004071 ORTHO05D004501 8.1e-138 494.2 345 71.6
Gohir.D07G078000 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.4e-137 493.4 359 69.9
Gorai.001G203600 Gossypium raimondii HOM05D004071 ORTHO05D004501 1.8e-137 493.0 347 70.9
Potri.004G104900 Populus trichocarpa HOM05D004071 ORTHO05D004501 1.8e-137 493.0 350 70.6
Lj2g0019369 Lotus japonicus HOM05D004071 ORTHO05D004501 2.4e-137 492.7 347 71.8
MD09G1082200 Malus domestica HOM05D004071 ORTHO05D004501 3.1e-137 492.3 347 71.2
PGSC0003DMG400018768 Solanum tuberosum HOM05D004071 ORTHO05D004501 4.0e-137 491.9 349 71.1
CANSAT64G0921 Cannabis sativa HOM05D004071 ORTHO05D004501 5.3e-137 491.5 346 72.0
Peaxi162Scf01056g00238 Petunia axillaris HOM05D004071 ORTHO05D004501 9.0e-137 490.7 345 71.6
TAR622G0876 Trochodendron aralioides HOM05D004071 ORTHO05D004501 9.0e-137 490.7 341 71.0
Duzib268G0320 Durio zibethinus HOM05D004071 ORTHO05D004501 2.6e-136 489.2 345 69.9
Psat1g062200 Pisum sativum HOM05D004071 ORTHO05D004501 1.0e-135 487.3 347 69.2
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 1.0e-135 487.3 348 71.8
DCAR_007521 Daucus carota HOM05D000912 ORTHO05D004501 2.9e-135 485.7 344 69.8
TPR.G9685 Trifolium pratense HOM05D004071 ORTHO05D004501 3.8e-135 485.3 347 69.2
Solyc03g045090.3 Solanum lycopersicum HOM05D004071 ORTHO05D004501 1.4e-134 483.4 347 71.2
MELO3C022067.2 Cucumis melo HOM05D004071 ORTHO05D004501 4.2e-134 481.9 348 68.7
Lsat_1_v5_gn_2_86560 Lactuca sativa HOM05D004071 ORTHO05D004501 9.3e-134 480.7 343 68.8
CsaV3_5G039030 Cucumis sativus L. HOM05D004071 ORTHO05D004501 1.6e-133 479.9 347 68.6
Glyma.13G047900 Glycine max HOM05D004071 ORTHO05D004501 2.7e-133 479.2 348 69.0
HanXRQChr09g0263441 Helianthus annuus HOM05D004071 ORTHO05D004501 7.9e-133 477.6 340 70.6
Lsat_1_v5_gn_4_175840 Lactuca sativa HOM05D004071 ORTHO05D004501 7.9e-133 477.6 346 70.5
Phvul.004G073300 Phaseolus vulgaris HOM05D004071 ORTHO05D004501 1.8e-132 476.5 349 67.9
MBI16_g36053_MAGBIO Magnolia biondii HOM05D004071 ORTHO05D004501 3.9e-132 475.3 367 65.7
Ca_14084_v3 Cicer arietinum L. HOM05D004071 ORTHO05D004501 1.5e-131 473.4 347 67.1
FAN09G0395 Fragaria x ananassa HOM05D000085 ORTHO05D004501 1.5e-131 473.4 344 68.6
Sopen03g009550 Solanum pennellii HOM05D004071 ORTHO05D004501 2.5e-131 472.6 347 69.2
Medtr6g016780 Medicago truncatula HOM05D004071 ORTHO05D004501 3.3e-131 472.2 348 67.5
Gohir.D08G047900 Gossypium hirsutum HOM05D004071 ORTHO05D004501 4.3e-131 471.9 344 68.9
arahy.Tifrunner.gnm1.ann1.85GVTZ Arachis hypogaea HOM05D004071 ORTHO05D004501 1.3e-130 470.3 347 68.3
Hund13742 Selenicereus undatus HOM05D004071 ORTHO05D004501 1.3e-130 470.3 348 67.0
ClCG11G005270 Citrullus lanatus HOM05D004071 ORTHO05D004501 1.6e-130 469.9 347 68.0
CARHR076390 Cardamine hirsuta HOM05D004071 ORTHO05D004501 3.7e-130 468.8 342 69.3
arahy.Tifrunner.gnm1.ann1.UUQR92 Arachis hypogaea HOM05D004071 ORTHO05D004501 4.8e-130 468.4 341 67.2
Gohir.A08G037600 Gossypium hirsutum HOM05D004071 ORTHO05D004501 4.8e-130 468.4 344 68.0
Sed0017773 Sechium edule HOM05D004071 ORTHO05D004501 6.3e-130 468.0 345 67.2
Nn3g17651 Nelumbo nucifera HOM05D004071 ORTHO05D004501 1.4e-129 466.8 344 67.2
THA.LOC104827150 Tarenaya hassleriana HOM05D004071 ORTHO05D004501 1.4e-129 466.8 346 69.7
Actinidia26308 Actinidia chinensis HOM05D004071 ORTHO05D004501 1.8e-129 466.5 343 68.8
arahy.Tifrunner.gnm1.ann1.SG5ZZ4 Arachis hypogaea HOM05D004071 ORTHO05D004501 3.1e-129 465.7 341 66.9
TWI74G0934 Tripterygium wilfordii HOM05D004071 ORTHO05D004501 3.1e-129 465.7 344 68.3
Gorai.004G047400 Gossypium raimondii HOM05D004071 ORTHO05D004501 5.3e-129 464.9 344 68.3
GSVIVG01036463001 Vitis vinifera HOM05D004071 ORTHO05D004501 9.0e-129 464.2 340 69.1
Manes.02G065500 Manihot esculenta HOM05D004071 ORTHO05D004501 1.2e-128 463.8 349 67.6
ECA232G0981 Erigeron canadensis HOM05D004071 ORTHO05D004501 2.6e-128 462.6 345 69.0
Rhsim08G0080100 Rhododendron simsii HOM05D004071 ORTHO05D004501 3.4e-128 462.2 346 67.6
PGR042G1023 Punica granatum HOM05D004071 ORTHO05D004501 8.5e-127 457.6 344 67.4
PSO063G1546 Papaver somniferum HOM05D004071 ORTHO05D004501 1.1e-126 457.2 341 66.3
HanXRQChr07g0200191 Helianthus annuus HOM05D004071 ORTHO05D004501 1.9e-126 456.4 349 66.5
Lj4A130T17 Lonicera japonica HOM05D004071 ORTHO05D004501 1.9e-126 456.4 346 67.9
TAR629G1013 Trochodendron aralioides HOM05D004071 ORTHO05D004501 1.6e-125 453.4 343 67.1
Actinidia36304 Actinidia chinensis HOM05D004071 ORTHO05D004501 2.7e-125 452.6 345 67.5
FvH4_6g45520 Fragaria vesca HOM05D004071 ORTHO05D004501 3.6e-125 452.2 344 66.6
FAN14G5468 Fragaria x ananassa HOM05D000085 ORTHO05D004501 3.6e-125 452.2 343 67.1
FAN05G3345 Fragaria x ananassa HOM05D004071 ORTHO05D004501 6.1e-125 451.4 344 66.9
PSO782G5396 Papaver somniferum HOM05D004071 ORTHO05D004501 1.0e-124 450.7 342 65.8
Aqoxy3G00414 Aquilegia oxysepala HOM05D004071 ORTHO05D004501 1.3e-124 450.3 343 64.7
FAN02G1076 Fragaria x ananassa HOM05D000085 ORTHO05D004501 8.7e-124 447.6 343 66.5
RcHm_v2.0_Chr2g0163461 Rosa chinensis HOM05D004071 ORTHO05D004501 8.7e-124 447.6 347 66.3
Sed0022702 Sechium edule HOM05D004071 ORTHO05D004501 1.5e-123 446.8 331 67.7
VMungo0464G1781 Vigna mungo HOM05D004071 ORTHO05D004501 2.5e-123 446.0 344 64.5
EL10Ac2g04623 Beta vulgaris HOM05D004071 ORTHO05D004501 5.7e-123 444.9 339 65.2
CDE08G1388 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 1.3e-122 443.7 341 66.0
Rhsim10G0064500 Rhododendron simsii HOM05D004071 ORTHO05D004501 6.9e-121 438.0 346 65.3
Hma1.2p1_0136F.1_g061955 Hydrangea macrophylla HOM05D004071 ORTHO05D004501 4.5e-120 435.3 308 71.8
HPP92_011599 Vanilla planifolia HOM05D004071 ORTHO05D004501 4.5e-120 435.3 343 63.0
AUR62008952 Chenopodium quinoa HOM05D004071 ORTHO05D004501 1.7e-119 433.3 345 62.3
Duzib133G0960 Durio zibethinus HOM05D004071 ORTHO05D004501 2.9e-119 432.6 345 64.1
TWI77G0983 Tripterygium wilfordii HOM05D004071 ORTHO05D004501 5.0e-119 431.8 347 64.6
Sabra04G0076900 Salix brachista HOM05D004071 ORTHO05D004501 1.1e-118 430.6 447 55.0
Os01g0604700 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 5.5e-118 428.3 344 61.0
Ah.16g102220 Amaranthus hybridus HOM05D004071 ORTHO05D004501 7.9e-117 424.5 344 62.8
Carub.0003s0151 Capsella rubella HOM05D004071 ORTHO05D004501 2.3e-116 422.9 345 64.1
BcaB04g21412 Brassica carinata HOM05D004071 ORTHO05D004501 5.1e-116 421.8 346 63.3
Lalb_Chr17g0336551 Lupinus albus HOM05D004071 ORTHO05D004501 1.1e-115 420.6 341 63.0
Nitab4.5_0004420g0040 Nicotiana tabacum HOM05D004071 ORTHO05D004501 1.1e-115 420.6 350 63.7
PGSC0003DMG400010091 Solanum tuberosum HOM05D004071 ORTHO05D004501 1.5e-115 420.2 347 62.8
Zm00001eb161490 Zea mays HOM05D004071 ORTHO05D004501 3.3e-115 419.1 350 59.4
BcaC05g30354 Brassica carinata HOM05D004071 ORTHO05D004501 4.4e-115 418.7 342 62.0
unitig_62.g23397 Utricularia gibba HOM05D004071 ORTHO05D004501 5.7e-115 418.3 350 61.1
BcaC09g47699 Brassica carinata HOM05D004071 ORTHO05D004501 1.3e-114 417.2 341 61.9
AT3G02420 Arabidopsis thaliana HOM05D004071 ORTHO05D004501 1.7e-114 416.8 345 63.5
Potri.017G110600 Populus trichocarpa HOM05D004071 ORTHO05D004501 1.7e-114 416.8 347 61.4
BraA05t23141Z Brassica rapa HOM05D004071 ORTHO05D004501 2.8e-114 416.0 343 62.4
Sp3g01460 Schrenkiella parvula HOM05D004071 ORTHO05D004501 3.7e-114 415.6 344 62.5
AUR62014550 Chenopodium quinoa HOM05D004071 ORTHO05D004501 1.8e-113 413.3 359 59.1
Thhalv10021061m.g Eutrema salsugineum HOM05D004071 ORTHO05D004501 6.9e-113 411.4 344 62.2
HPP92_003788 Vanilla planifolia HOM05D004071 ORTHO05D004501 1.5e-112 410.2 345 59.4
PSO017G6828 Papaver somniferum HOM05D004071 ORTHO05D004501 5.9e-112 408.3 344 58.1
vmacro18101 Vaccinium macrocarpon HOM05D004071 ORTHO05D004501 5.9e-112 408.3 345 61.7
Aa31LG5G12930 Aethionema arabicum HOM05D004071 ORTHO05D004501 2.2e-111 406.4 342 61.7
CDE06G1497 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 2.2e-111 406.4 341 60.7
Nn4g23653 Nelumbo nucifera HOM05D004071 ORTHO05D004501 2.2e-111 406.4 304 67.1
PSO478G0222 Papaver somniferum HOM05D004071 ORTHO05D004501 3.8e-111 405.6 342 56.1
ClCG05G012000 Citrullus lanatus HOM05D004071 ORTHO05D004501 5.5e-110 401.7 347 58.5
Hund16109 Selenicereus undatus HOM05D004071 ORTHO05D004501 5.5e-110 401.7 347 59.9
CSS0021599 Camellia sinensis var. sinensis HOM05D004071 ORTHO05D004501 2.1e-109 399.8 270 75.6
PGR004G2426 Punica granatum HOM05D004071 ORTHO05D004501 4.7e-109 398.7 291 71.1
Os05g0589000 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 6.7e-108 394.8 346 57.5
Sed0014814 Sechium edule HOM05D004071 ORTHO05D004501 5.7e-107 391.7 347 56.8
unitig_32.g10761 Utricularia gibba HOM05D004071 ORTHO05D004501 1.3e-106 390.6 343 56.6
Zm00001eb297500 Zea mays HOM05D004071 ORTHO05D004501 1.2e-104 384.0 348 54.6
SEGI_38032 Sequoiadendron giganteum HOM05D004071 ORTHO05D004501 2.6e-104 382.9 336 55.7
Glyma.19G043700 Glycine max HOM05D004071 ORTHO05D004501 1.3e-103 380.6 293 68.6
TAR371G1199 Trochodendron aralioides HOM05D004071 ORTHO05D004501 6.5e-103 378.3 300 66.0
vmacro05581 Vaccinium macrocarpon HOM05D004071 ORTHO05D004501 1.0e-100 370.9 427 50.1
Nitab4.5_0009272g0060 Nicotiana tabacum HOM05D004071 ORTHO05D004501 9.7e-99 364.4 357 56.0
AL3G11710 Arabidopsis lyrata HOM05D004071 ORTHO05D004501 8.5e-95 351.3 298 62.4
Peaxi162Scf00479g00310 Petunia axillaris HOM05D004071 ORTHO05D004501 1.7e-90 337.0 295 62.0
QL02p053393 Quercus lobata HOM05D004071 ORTHO05D004501 2.8e-90 336.3 244 71.7
Eucgr.I02122 Eucalyptus grandis HOM05D004071 ORTHO05D004501 6.3e-90 335.1 245 69.8
BolC5t35082H Brassica oleracea HOM05D004071 ORTHO05D007018 9.1e-89 331.3 316 56.6
Sc10g0001400 Simmondsia chinensis HOM05D004071 ORTHO05D004501 9.1e-89 331.3 245 69.0
AagrBONN_evm.TU.Sc2ySwM_117.1813 Anthoceros agrestis HOM05D004071 ORTHO05D004501 2.8e-85 319.7 335 47.8
Lj7A9T84 Lonicera japonica HOM05D004071 ORTHO05D004501 4.7e-85 318.9 226 76.1
ATR0730G004 Amborella trichopoda HOM05D004071 ORTHO05D004501 6.1e-85 318.5 276 59.4
Mapoly0013s0171 Marchantia polymorpha HOM05D004071 ORTHO05D004501 5.7e-83 312.0 341 44.6
SMO164G0101 Selaginella moellendorffii HOM05D004071 ORTHO05D004501 9.8e-83 311.2 338 49.1
arahy.Tifrunner.gnm1.ann1.2VHL38 Arachis hypogaea HOM05D004071 ORTHO05D004501 1.3e-82 310.8 245 65.7
Nitab4.5_0000612g0160 Nicotiana tabacum HOM05D004071 ORTHO05D004501 5.4e-81 305.4 344 50.0
Gohir.A13G091200 Gossypium hirsutum HOM05D004071 ORTHO05D004501 2.7e-80 303.1 228 69.3
C09p75710 Brassica napus HOM05D002308 ORTHO05D002535 3.5e-80 302.8 285 56.5
Dinv33918 Davidia involucrata HOM05D004071 ORTHO05D004501 1.0e-79 301.2 187 79.7
A05p45210 Brassica napus HOM05D002308 ORTHO05D007018 2.9e-79 299.7 285 56.8
Pp3c7_9290 Physcomitrium patens HOM05D004071 ORTHO05D004501 1.7e-74 283.9 342 43.3
DCAR_010977 Daucus carota HOM05D004071 ORTHO05D004501 2.4e-73 280.0 336 47.3
Zm00001eb158750 Zea mays HOM05D004071 ORTHO05D004501 1.2e-72 277.7 272 53.3
BraSC141t45626Z Brassica rapa HOM05D004071 ORTHO05D004501 2.7e-72 276.6 239 59.4
Os01g0641700 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 1.4e-68 264.2 279 52.0
BolC1t05906H Brassica oleracea HOM05D004071 ORTHO05D004501 4.0e-68 262.7 244 56.6
BNapus_Darmor_BZH_scaffold_208p00070 Brassica napus HOM05D004071 ORTHO05D004501 9.8e-67 258.1 239 57.3
CDE05G2628 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 8.3e-66 255.0 261 50.6
TPR.G28780 Trifolium pratense HOM05D004071 ORTHO05D004501 3.6e-61 239.6 145 77.2
SHI25579 Sapria himalayana HOM05D004071 ORTHO05D004501 1.1e-60 238.0 278 47.1
Nitab4.5_0003161g0040 Nicotiana tabacum HOM05D004071 ORTHO05D004501 1.7e-55 220.7 130 80.0
Gohir.A03G111050 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.2e-45 188.0 140 67.1
unitig_52.g17623 Utricularia gibba HOM05D004071 ORTHO05D004501 1.1e-41 174.9 125 69.6
Gohir.A04G081800 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.9e-41 174.1 115 76.5
Gohir.A13G168300 Gossypium hirsutum HOM05D004071 ORTHO05D004501 2.4e-41 173.7 112 76.8
QL02p053385 Quercus lobata HOM05D004071 ORTHO05D004501 1.7e-39 167.5 105 74.3
Dinv33917 Davidia involucrata HOM05D004071 ORTHO05D004501 7.6e-35 152.1 119 67.2
Actinidia17620 Actinidia chinensis HOM05D004071 ORTHO05D004501 1.9e-25 120.9 73 71.2
Solyc02g089780.3 Solanum lycopersicum HOM05D004071 ORTHO05D004501 1.9e-25 120.9 343 27.1
CBR_g39496 Chara braunii HOM05D004071 ORTHO05D004501 1.5e-22 111.3 149 37.6
SEGI_19153 Sequoiadendron giganteum HOM05D004071 ORTHO05D004501 5.8e-19 99.4 54 74.1
Gohir.A10G225466 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.9e-14 84.3 57 70.2
arahy.Tifrunner.gnm1.ann1.FI956K Arachis hypogaea HOM05D004071 ORTHO05D004501 6.9e-12 75.9 97 43.3
HanXRQChr02g0053871 Helianthus annuus HOM05D004071 ORTHO05D004501 1.6e-08 64.7 103 39.8
CBR_g42155 Chara braunii HOM05D004071 ORTHO05D004501 2.3e-07 60.8 142 30.3
Haze_14102 Corylus avellana HOM05D004071 ORTHO05D004501 1.1e-06 58.5 75 49.3


User provided reference genes

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