Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 6.1e-79 297.4 144 100.0
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 2.5e-64 248.8 134 88.8
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 3.6e-63 245.0 136 85.3
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.4e-62 243.0 134 84.3
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 3.0e-62 241.9 141 83.7
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 5.2e-62 241.1 134 84.3
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.5e-61 239.6 134 86.6
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 5.7e-61 237.7 134 86.6
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.3e-60 236.5 133 81.2
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.7e-60 236.1 138 81.9
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 2.2e-60 235.7 137 79.6
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.8e-60 235.3 141 80.1
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 4.9e-60 234.6 136 82.4
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 6.3e-60 234.2 138 80.4
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 8.3e-60 233.8 141 79.4
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.1e-59 233.4 136 81.6
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 3.1e-59 231.9 138 82.6
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 3.1e-59 231.9 141 75.9
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 7.0e-59 230.7 136 79.4
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 9.2e-59 230.3 138 79.7
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 9.2e-59 230.3 133 78.9
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.6e-58 229.6 137 78.1
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 3.5e-58 228.4 133 81.2
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 3.5e-58 228.4 133 77.4
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 4.5e-58 228.0 132 79.5
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 4.5e-58 228.0 133 81.2
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 5.9e-58 227.6 137 79.6
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.3e-57 226.5 132 81.1
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 1.7e-57 226.1 135 79.3
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 1.7e-57 226.1 146 74.7
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 2.3e-57 225.7 134 79.1
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 2.3e-57 225.7 143 75.5
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 2.9e-57 225.3 141 77.3
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 2.9e-57 225.3 143 75.5
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 2.9e-57 225.3 133 75.9
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.9e-57 225.3 129 84.5
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 3.8e-57 224.9 135 77.0
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 3.8e-57 224.9 132 81.1
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 8.6e-57 223.8 134 79.9
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.1e-56 223.4 136 76.5
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 1.1e-56 223.4 133 78.9
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 1.5e-56 223.0 136 77.2
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 1.5e-56 223.0 136 77.2
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 5.6e-56 221.1 133 75.2
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 9.5e-56 220.3 138 75.4
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.6e-55 219.5 141 77.3
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 3.6e-55 218.4 137 78.8
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 3.6e-55 218.4 132 76.5
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 3.6e-55 218.4 132 76.5
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 8.0e-55 217.2 142 73.9
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 8.0e-55 217.2 135 75.6
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 2.3e-54 215.7 117 88.0
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 2.3e-54 215.7 133 78.2
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 2.3e-54 215.7 139 76.3
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 3.0e-54 215.3 133 77.4
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 3.0e-54 215.3 133 72.9
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 4.0e-54 214.9 134 77.6
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 6.8e-54 214.2 134 79.1
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 6.8e-54 214.2 139 74.8
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 8.9e-54 213.8 139 71.9
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.2e-53 213.4 134 72.4
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.2e-53 213.4 133 73.7
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 2.0e-53 212.6 136 77.2
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.0e-53 212.6 135 71.9
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 2.6e-53 212.2 133 77.4
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.6e-53 212.2 133 73.7
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.6e-53 212.2 121 84.3
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 3.4e-53 211.8 132 74.2
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 5.8e-53 211.1 135 77.0
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 7.5e-53 210.7 133 72.9
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 3.7e-52 208.4 134 76.9
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 8.3e-52 207.2 137 73.7
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 1.1e-51 206.8 124 81.5
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 1.1e-51 206.8 124 81.5
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 7.0e-51 204.1 124 80.6
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.6e-50 203.0 125 75.2
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.6e-50 203.0 125 75.2
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 7.8e-50 200.7 134 70.1
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 1.3e-49 199.9 120 77.5
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.3e-49 199.9 134 70.1
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.3e-49 199.9 134 70.1
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 2.3e-49 199.1 120 77.5
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 2.3e-49 199.1 134 70.1
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 3.9e-49 198.4 134 69.4
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 1.1e-48 196.8 109 82.6
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 1.9e-48 196.1 134 67.9
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.9e-48 196.1 136 69.9
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 2.5e-48 195.7 148 66.2
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 2.5e-48 195.7 134 70.9
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 2.5e-48 195.7 142 68.3
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 4.3e-48 194.9 133 71.4
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 5.6e-48 194.5 134 69.4
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.2e-47 193.4 134 69.4
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 1.2e-47 193.4 137 68.6
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.6e-47 193.0 136 68.4
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 1.6e-47 193.0 136 69.1
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 2.1e-47 192.6 134 67.2
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 6.2e-47 191.0 137 67.9
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 8.0e-47 190.7 116 77.6
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 1.8e-46 189.5 112 78.6
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 2.3e-46 189.1 130 70.8
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 6.8e-46 187.6 137 67.2
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 6.8e-46 187.6 137 67.2
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 6.8e-46 187.6 132 68.2
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-45 186.4 137 66.4
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.3e-44 183.3 111 76.6
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 3.7e-44 181.8 139 61.2
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 6.4e-44 181.0 140 64.3
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 2.4e-43 179.1 132 65.9
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 2.4e-43 179.1 110 75.5
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 9.2e-43 177.2 135 62.2
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 1.0e-41 173.7 125 68.8
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 3.9e-41 171.8 134 63.4
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 1.1e-40 170.2 131 65.6
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 2.4e-35 152.5 106 68.9
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 6.0e-34 147.9 122 57.4
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 6.0e-34 147.9 96 71.9
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 2.3e-33 146.0 89 74.2
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 2.3e-33 146.0 136 50.7
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 3.0e-33 145.6 126 54.0
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 5.1e-33 144.8 125 52.0
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.5e-32 143.3 129 50.4
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.9e-32 142.9 112 57.1
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.3e-32 142.1 98 69.4
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 4.7e-31 138.3 89 70.8
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 3.4e-29 132.1 83 72.3
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 7.6e-29 131.0 85 70.6
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.0e-25 120.6 114 50.9
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 3.6e-23 112.1 90 62.2
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 5.6e-16 88.2 53 75.5
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 3.6e-15 85.5 85 55.3
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 3.9e-09 65.5 43 65.1
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 6.7e-09 64.7 67 50.7


User provided reference genes

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