Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032840.1 Olea europaea HOM05D003495 ORTHO05D004159 0.0e+00 3368.6 1692 100.0
Oeu062191.1 Olea europaea HOM05D003495 ORTHO05D004159 0.0e+00 3176.3 1823 88.9
Cc07_g04650 Coffea canephora HOM05D003495 ORTHO05D004159 0.0e+00 2985.7 1821 83.5
Peaxi162Scf00020g02133 Petunia axillaris HOM05D003495 ORTHO05D004159 0.0e+00 2984.9 1822 83.0
Nitab4.5_0002171g0110 Nicotiana tabacum HOM05D003495 ORTHO05D004159 0.0e+00 2983.4 1840 82.7
Sopen02g034150 Solanum pennellii HOM05D003495 ORTHO05D004159 0.0e+00 2979.5 1824 82.8
Nitab4.5_0002978g0060 Nicotiana tabacum HOM05D003495 ORTHO05D004159 0.0e+00 2974.1 1822 83.2
MSTRG.3380 Avicennia marina HOM05D003495 ORTHO05D004159 0.0e+00 2968.7 1823 83.6
Dinv34893 Davidia involucrata HOM05D003495 ORTHO05D004159 0.0e+00 2963.7 1823 82.6
CAN.G497.44 Capsicum annuum HOM05D003495 ORTHO05D004159 0.0e+00 2962.9 1822 82.7
DCAR_011000 Daucus carota HOM05D003495 ORTHO05D004159 0.0e+00 2959.1 1821 82.5
CSS0018508 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 0.0e+00 2958.7 1809 83.2
Actinidia18095 Actinidia chinensis HOM05D003495 ORTHO05D004159 0.0e+00 2957.9 1824 82.4
Migut.K00878 Erythranthe guttata HOM05D003495 ORTHO05D004159 0.0e+00 2956.0 1826 83.2
GSVIVG01036514001 Vitis vinifera HOM05D003495 ORTHO05D004159 0.0e+00 2947.5 1748 84.9
Lj4C126G12 Lonicera japonica HOM05D003495 ORTHO05D004159 0.0e+00 2926.3 1821 82.3
Peaxi162Scf00479g01011 Petunia axillaris HOM05D003495 ORTHO05D004159 0.0e+00 2920.6 1830 81.3
vmacro05603 Vaccinium macrocarpon HOM05D003495 ORTHO05D004159 0.0e+00 2918.6 1826 81.3
Sopen03g010670 Solanum pennellii HOM05D003495 ORTHO05D004159 0.0e+00 2914.8 1821 81.1
Dinv33880 Davidia involucrata HOM05D003495 ORTHO05D004159 0.0e+00 2913.3 1776 83.2
Solyc03g046450.3 Solanum lycopersicum HOM05D003495 ORTHO05D004159 0.0e+00 2910.9 1820 81.1
CSS0004216 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 0.0e+00 2909.4 1824 81.2
CSS0005441 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 0.0e+00 2908.6 1824 81.6
Prupe.3G246500 Prunus persica HOM05D003495 ORTHO05D004159 0.0e+00 2894.8 1824 80.7
Hma1.2p1_0588F.1_g184640 Hydrangea macrophylla HOM05D003495 ORTHO05D004159 0.0e+00 2890.1 1874 79.0
Ciclev10010888m.g Citrus clementina HOM05D003495 ORTHO05D004159 0.0e+00 2885.1 1824 80.3
Cpa.g.sc14.256 Carica papaya HOM05D003495 ORTHO05D004159 0.0e+00 2884.7 1827 80.5
QL02p063585 Quercus lobata HOM05D003495 ORTHO05D004159 0.0e+00 2882.0 1824 80.4
MD17G1067900 Malus domestica HOM05D003495 ORTHO05D004159 0.0e+00 2874.0 1824 80.3
Manes.01G104801 Manihot esculenta HOM05D003495 ORTHO05D004159 0.0e+00 2873.2 1823 80.5
Thecc.02G251800 Theobroma cacao HOM05D003495 ORTHO05D004159 0.0e+00 2870.5 1828 79.9
MD09G1077600 Malus domestica HOM05D003495 ORTHO05D004159 0.0e+00 2864.3 1824 79.7
CAN.G563.4 Capsicum annuum HOM05D003495 ORTHO05D004159 0.0e+00 2856.2 1822 79.8
Cfa007716 Carpinus fangiana HOM05D003495 ORTHO05D004159 0.0e+00 2856.2 1825 79.8
TWI60G0296 Tripterygium wilfordii HOM05D003495 ORTHO05D004159 0.0e+00 2856.2 1827 79.9
Haze_14358 Corylus avellana HOM05D003495 ORTHO05D004159 0.0e+00 2855.1 1825 79.7
Atru.chr8.588 Acer truncatum HOM05D003495 ORTHO05D004159 0.0e+00 2854.3 1822 79.4
HanXRQChr15g0464911 Helianthus annuus HOM05D003495 ORTHO05D004159 0.0e+00 2851.6 1827 79.6
TAR374G0385 Trochodendron aralioides HOM05D003495 ORTHO05D004159 0.0e+00 2850.8 1828 79.6
CANSAT64G2734 Cannabis sativa HOM05D003495 ORTHO05D004159 0.0e+00 2850.5 1827 79.9
FvH4_6g46050 Fragaria vesca HOM05D003495 ORTHO05D004159 0.0e+00 2850.1 1819 79.7
RcHm_v2.0_Chr2g0164371 Rosa chinensis HOM05D003495 ORTHO05D004159 0.0e+00 2848.9 1825 79.5
FAN14G1484 Fragaria x ananassa HOM05D003495 ORTHO05D004159 0.0e+00 2847.4 1819 79.6
MELO3C022060.2 Cucumis melo HOM05D003495 ORTHO05D004159 0.0e+00 2843.5 1826 79.4
FAN02G1990 Fragaria x ananassa HOM05D003495 ORTHO05D004159 0.0e+00 2842.4 1819 79.5
Gorai.005G181800 Gossypium raimondii HOM05D003495 ORTHO05D004159 0.0e+00 2842.4 1825 79.5
CsaV3_5G038800 Cucumis sativus L. HOM05D003495 ORTHO05D004159 0.0e+00 2840.8 1826 79.3
FAN09G4792 Fragaria x ananassa HOM05D003495 ORTHO05D004159 0.0e+00 2837.0 1819 79.4
ClCG11G005050 Citrullus lanatus HOM05D003495 ORTHO05D004159 0.0e+00 2831.6 1785 80.8
Duzib268G1709 Durio zibethinus HOM05D003495 ORTHO05D004159 0.0e+00 2830.8 1826 79.0
FAN05G3267 Fragaria x ananassa HOM05D003495 ORTHO05D004159 0.0e+00 2820.8 1818 79.0
ECA232G2419 Erigeron canadensis HOM05D003495 ORTHO05D004159 0.0e+00 2805.0 1823 78.8
PGR004G1253 Punica granatum HOM05D003495 ORTHO05D004159 0.0e+00 2804.2 1824 78.3
HanXRQChr15g0489851 Helianthus annuus HOM05D003495 ORTHO05D004159 0.0e+00 2802.7 1823 78.5
Hund25028 Selenicereus undatus HOM05D003495 ORTHO05D004159 0.0e+00 2798.1 1825 78.2
Potri.017G106100 Populus trichocarpa HOM05D003495 ORTHO05D004159 0.0e+00 2791.5 1826 78.8
Thhalv10012410m.g Eutrema salsugineum HOM05D003495 ORTHO05D004159 0.0e+00 2785.0 1829 77.6
Sp6g28440 Schrenkiella parvula HOM05D003495 ORTHO05D004159 0.0e+00 2783.8 1828 77.6
A02p03170 Brassica napus HOM05D003495 ORTHO05D004159 0.0e+00 2782.7 1824 77.2
CARHR197650 Cardamine hirsuta HOM05D003495 ORTHO05D004159 0.0e+00 2781.9 1828 77.6
Medtr6g016215 Medicago truncatula HOM05D003495 ORTHO05D004159 0.0e+00 2781.9 1822 77.8
AT5G15680 Arabidopsis thaliana HOM05D003495 ORTHO05D004159 0.0e+00 2781.5 1828 77.4
Sed0005421 Sechium edule HOM05D003495 ORTHO05D004159 0.0e+00 2781.5 1831 77.7
C02p07920 Brassica napus HOM05D003495 ORTHO05D004159 0.0e+00 2781.1 1824 77.2
BolC2t06715H Brassica oleracea HOM05D003495 ORTHO05D004159 0.0e+00 2781.1 1824 77.2
BraA02t05287Z Brassica rapa HOM05D003495 ORTHO05D004159 0.0e+00 2781.1 1824 77.2
Eucgr.I02084 Eucalyptus grandis HOM05D003495 ORTHO05D004159 0.0e+00 2780.4 1825 77.2
Carub.0006s1383 Capsella rubella HOM05D003495 ORTHO05D004159 0.0e+00 2779.2 1828 77.4
AL6G26520 Arabidopsis lyrata HOM05D003495 ORTHO05D004159 0.0e+00 2778.4 1827 77.3
Aa31LG11G13890 Aethionema arabicum HOM05D003495 ORTHO05D004159 0.0e+00 2776.1 1831 77.4
THA.LOC104820987 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 0.0e+00 2775.7 1826 77.7
BcaC03g18444 Brassica carinata HOM05D003495 ORTHO05D004159 0.0e+00 2774.6 1824 77.0
Gohir.A03G138900 Gossypium hirsutum HOM05D003495 ORTHO05D004159 0.0e+00 2774.6 1825 78.4
Sed0015478 Sechium edule HOM05D003495 ORTHO05D004159 0.0e+00 2774.2 1825 77.9
BcaNung02199 Brassica carinata HOM05D003495 ORTHO05D004159 0.0e+00 2770.0 1824 77.0
Lalb_Chr02g0158651 Lupinus albus HOM05D003495 ORTHO05D004159 0.0e+00 2768.8 1823 77.1
arahy.Tifrunner.gnm1.ann1.AQF1TQ Arachis hypogaea HOM05D003495 ORTHO05D004159 0.0e+00 2766.9 1833 77.3
Lj2g0019402 Lotus japonicus HOM05D003495 ORTHO05D004159 0.0e+00 2763.8 1822 77.7
Glyma.11G061700 Glycine max HOM05D003495 ORTHO05D004159 0.0e+00 2757.2 1822 77.3
THA.LOC104802983 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 0.0e+00 2757.2 1826 77.1
TAR622G0597 Trochodendron aralioides HOM05D003495 ORTHO05D004159 0.0e+00 2756.9 1827 77.3
Glyma.19G037200 Glycine max HOM05D003495 ORTHO05D004159 0.0e+00 2755.7 1823 77.4
AUR62002798 Chenopodium quinoa HOM05D003495 ORTHO05D004159 0.0e+00 2751.9 1826 77.5
Duzib248G1077 Durio zibethinus HOM05D003495 ORTHO05D004159 0.0e+00 2751.9 1824 77.4
Phvul.004G045000 Phaseolus vulgaris HOM05D003495 ORTHO05D004159 0.0e+00 2751.1 1822 77.2
Aqoxy5G03432 Aquilegia oxysepala HOM05D003495 ORTHO05D004159 0.0e+00 2744.9 1827 76.8
EL10Ac6g14290 Beta vulgaris HOM05D003495 ORTHO05D004159 0.0e+00 2743.0 1818 77.4
Ah.02g128180 Amaranthus hybridus HOM05D003495 ORTHO05D004159 0.0e+00 2741.8 1825 77.3
AUR62014105 Chenopodium quinoa HOM05D003495 ORTHO05D004159 0.0e+00 2740.7 1826 77.4
Sc04g0005950 Simmondsia chinensis HOM05D003495 ORTHO05D004159 0.0e+00 2735.3 1829 77.1
TPR.G15949 Trifolium pratense HOM05D003495 ORTHO05D004159 0.0e+00 2723.7 1767 78.3
PSO063G7059 Papaver somniferum HOM05D003495 ORTHO05D004159 0.0e+00 2691.8 1853 75.5
Psat1g064160 Pisum sativum HOM05D003495 ORTHO05D004159 0.0e+00 2685.2 1823 75.6
Gorai.002G166500 Gossypium raimondii HOM05D003495 ORTHO05D004159 0.0e+00 2669.0 1824 75.2
A03p07290 Brassica napus HOM05D003495 ORTHO05D004159 0.0e+00 2609.3 1826 73.4
C03p08360 Brassica napus HOM05D003495 ORTHO05D004159 0.0e+00 2584.7 1826 73.1
BraA03t10052Z Brassica rapa HOM05D003495 ORTHO05D004159 0.0e+00 2584.7 1855 72.1
BolC3t13343H Brassica oleracea HOM05D003495 ORTHO05D004159 0.0e+00 2567.3 1855 71.8
PSO063G5616 Papaver somniferum HOM05D003495 ORTHO05D004159 0.0e+00 2560.0 1834 72.7
BcaB01g05032 Brassica carinata HOM05D003495 ORTHO05D004159 0.0e+00 2464.5 1822 70.6
Zm00001eb190620 Zea mays HOM05D003495 ORTHO05D004159 0.0e+00 2400.5 1835 67.7
FAN14G3604 Fragaria x ananassa HOM05D003495 ORTHO05D004159 0.0e+00 2360.1 1521 78.9
ECA238G4655 Erigeron canadensis HOM05D003495 ORTHO05D004159 0.0e+00 2349.7 1826 67.3
CDE04G3053 Ceratophyllum demersum HOM05D003495 ORTHO05D004159 0.0e+00 2335.8 1831 67.9
ATR0618G126 Amborella trichopoda HOM05D003495 ORTHO05D004159 0.0e+00 2335.5 1835 67.5
Ca_20758_v3 Cicer arietinum L. HOM05D003495 ORTHO05D004159 0.0e+00 2318.9 1497 78.3
SGA_v2.0_scaffold148G36460 Striga asiatica HOM05D003495 ORTHO05D004159 0.0e+00 2299.2 1531 78.4
HanXRQChr14g0447961 Helianthus annuus HOM05D003495 ORTHO05D004159 0.0e+00 2279.2 1828 65.9
SEGI_22880 Sequoiadendron giganteum HOM05D003495 ORTHO05D004159 0.0e+00 2247.2 1894 63.8
Lsat_1_v5_gn_2_85980 Lactuca sativa HOM05D003495 ORTHO05D004159 0.0e+00 2234.1 1837 64.7
Solyc02g089370.2 Solanum lycopersicum HOM05D003495 ORTHO05D004159 0.0e+00 2095.9 1298 81.4
Mapoly0124s0011 Marchantia polymorpha HOM05D003495 ORTHO05D004159 0.0e+00 2085.1 1910 59.9
VMungo0464G1145 Vigna mungo HOM05D003495 ORTHO05D004159 0.0e+00 2047.3 1392 75.8
SMO351G0561 Selaginella moellendorffii HOM05D003495 ORTHO05D004159 0.0e+00 2020.4 1839 60.1
unitig_748.g7269 Utricularia gibba HOM05D003495 ORTHO05D004159 0.0e+00 1997.2 1366 76.7
AagrBONN_evm.TU.Sc2ySwM_228.311 Anthoceros agrestis HOM05D003495 ORTHO05D004159 0.0e+00 1969.9 1913 56.9
CiPaw.03G081100 Carya illinoinensis HOM05D003495 ORTHO05D004159 0.0e+00 1958.7 1284 78.7
Pp3c12_3160 Physcomitrium patens HOM05D003495 ORTHO05D004159 0.0e+00 1899.8 1911 56.3
Pp3c13_5370 Physcomitrium patens HOM05D003495 ORTHO05D004159 0.0e+00 1875.9 1903 55.4
Pp3c3_1860 Physcomitrium patens HOM05D003495 ORTHO05D004159 0.0e+00 1872.8 1897 55.6
Gohir.A01G142600 Gossypium hirsutum HOM05D003495 ORTHO05D004159 0.0e+00 1871.7 1318 73.4
Gohir.D01G134500 Gossypium hirsutum HOM05D003495 ORTHO05D004159 0.0e+00 1776.1 1282 71.9
HPP92_025565 Vanilla planifolia HOM05D003495 ORTHO05D004159 0.0e+00 1737.6 1300 69.1
Gohir.D02G161820 Gossypium hirsutum HOM05D003495 ORTHO05D004159 0.0e+00 1679.5 969 87.4
Hund20735 Selenicereus undatus HOM05D003495 ORTHO05D004159 0.0e+00 1662.5 1282 69.2
COL.COLO4_24186 Corchorus olitorius HOM05D003495 ORTHO05D004159 0.0e+00 1649.0 1319 67.8
Lsat_1_v5_gn_4_173941 Lactuca sativa HOM05D003495 ORTHO05D004159 0.0e+00 1520.0 1030 75.5
CBR_g31516 Chara braunii HOM05D003495 ORTHO05D004159 0.0e+00 1442.2 2018 44.3
SHI33626 Sapria himalayana HOM05D003495 ORTHO05D004159 0.0e+00 1343.6 971 72.1
Nn7g37976 Nelumbo nucifera HOM05D003495 ORTHO05D004159 0.0e+00 1207.6 801 76.7
Nitab4.5_0001397g0040 Nicotiana tabacum HOM05D003495 ORTHO05D004159 0.0e+00 1169.1 1580 47.0
Gohir.D02G161860 Gossypium hirsutum HOM05D003495 ORTHO05D004159 0.0e+00 1162.5 789 74.9
Lsat_1_v5_gn_4_173921 Lactuca sativa HOM05D003495 ORTHO05D004159 2.5e-304 1049.7 674 80.9
arahy.Tifrunner.gnm1.ann1.BVET7T Arachis hypogaea HOM05D003495 ORTHO05D004159 7.3e-264 915.2 545 82.2
Hund20736 Selenicereus undatus HOM05D003495 ORTHO05D004159 2.6e-237 827.0 542 77.7
unitig_748.g7268 Utricularia gibba HOM05D003495 ORTHO05D004159 5.3e-206 723.0 427 83.6
VMungo0464G0617 Vigna mungo HOM05D003495 ORTHO05D004159 2.9e-196 690.6 427 81.3
CSS0011723 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 3.7e-191 673.7 427 80.3
Os02g0830801 Oryza sativa ssp. japonica HOM05D003495 ORTHO05D004159 2.6e-176 624.4 428 72.9
COL.COLO4_24184 Corchorus olitorius HOM05D003495 ORTHO05D004159 3.3e-176 624.0 365 86.3
RcHm_v2.0_Chr2g0117961 Rosa chinensis HOM05D003495 ORTHO05D004159 6.5e-172 609.8 365 84.9
Nitab4.5_0000154g0090 Nicotiana tabacum HOM05D003495 ORTHO05D004159 2.6e-168 597.8 381 80.8
HPP92_025566 Vanilla planifolia HOM05D003495 ORTHO05D004159 4.8e-167 593.6 427 72.1
Actinidia36277 Actinidia chinensis HOM05D003495 ORTHO05D004159 4.6e-149 533.9 314 82.5
RcHm_v2.0_Chr2g0117951 Rosa chinensis HOM05D003495 ORTHO05D004159 1.7e-135 488.8 307 80.8
Os02g0830900 Oryza sativa ssp. japonica HOM05D003495 ORTHO05D004159 9.6e-123 446.4 380 63.2
CAN.G497.63 Capsicum annuum HOM05D003495 ORTHO05D004159 4.4e-120 437.6 644 48.8
RcHm_v2.0_Chr2g0117981 Rosa chinensis HOM05D003495 ORTHO05D004159 7.4e-107 393.7 385 56.9
CAN.G497.62 Capsicum annuum HOM05D003495 ORTHO05D004159 1.6e-90 339.3 358 55.3
CAN.G497.69 Capsicum annuum HOM05D003495 ORTHO05D004159 7.2e-86 323.9 382 52.4
Actinidia36276 Actinidia chinensis HOM05D003495 ORTHO05D004159 2.2e-79 302.4 164 90.9
CAN.G497.66 Capsicum annuum HOM05D003495 ORTHO05D004159 5.1e-76 291.2 487 42.1
Ca_20757_v3 Cicer arietinum L. HOM05D003495 ORTHO05D004159 5.1e-76 291.2 214 71.0
Cre17.g703750 Chlamydomonas reinhardtii HOM05D003495 ORTHO05D004159 6.7e-76 290.8 1361 24.7
SEGI_11817 Sequoiadendron giganteum HOM05D003495 ORTHO05D004159 5.7e-75 287.7 315 54.3
Nitab4.5_0000154g0080 Nicotiana tabacum HOM05D003495 ORTHO05D004159 4.1e-73 281.6 151 91.4
CSS0034486 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D011845 1.2e-64 253.4 140 84.3
CSS0017914 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D011845 3.5e-64 251.9 140 83.6
Solyc02g089390.3 Solanum lycopersicum HOM05D003495 ORTHO05D004159 2.8e-58 232.3 153 81.0
SHI33624 Sapria himalayana HOM05D003495 ORTHO05D004159 2.1e-53 216.1 256 49.2
CSS0030310 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D011845 2.2e-47 196.1 140 67.9
Psat6g133600 Pisum sativum HOM05D003495 ORTHO05D004159 9.8e-43 180.6 142 73.2
Psat5g191680 Pisum sativum HOM05D003495 ORTHO05D004159 7.0e-41 174.5 115 77.4
CAN.G497.68 Capsicum annuum HOM05D003495 ORTHO05D015025 9.2e-41 174.1 146 66.4
MCO10G374 Micromonas commoda HOM05D003495 ORTHO05D004159 2.7e-40 172.6 591 28.8
SHI33623 Sapria himalayana HOM05D003495 ORTHO05D004159 6.1e-37 161.4 112 67.9
Hma1.2p1_2186F.1_g316380 Hydrangea macrophylla HOM05D003495 ORTHO05D004159 1.2e-29 137.1 114 66.7
CAN.G497.59 Capsicum annuum HOM05D003495 ORTHO05D004159 2.2e-26 126.3 69 89.9
Actinidia36278 Actinidia chinensis HOM05D003495 ORTHO05D004159 2.4e-25 122.9 110 57.3
CAN.G497.67 Capsicum annuum HOM05D003495 ORTHO05D004159 1.6e-24 120.2 63 87.3
Actinidia36279 Actinidia chinensis HOM05D003495 ORTHO05D004159 6.8e-20 104.8 180 40.0
EL10Ac5g11417 Beta vulgaris HOM05D003495 ORTHO05D004159 3.7e-18 99.0 62 72.6
Lsat_1_v5_gn_4_36641 Lactuca sativa HOM05D001412 ORTHO05D002473 2.7e-16 92.8 53 81.1
Cfa023482 Carpinus fangiana HOM05D003495 ORTHO05D125175 1.2e-08 67.4 249 22.9
BcaB08g36895 Brassica carinata HOM05D003495 ORTHO05D004159 1.3e-07 63.9 37 83.8
CiPaw.03G081200 Carya illinoinensis HOM05D003495 ORTHO05D004159 1.9e-06 60.1 32 78.1


User provided reference genes

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